Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr21g0308861 Lupinus albus HOM05D004679 ORTHO05D005524 4.8e-127 458.0 256 100.0
Lalb_Chr06g0166021 Lupinus albus HOM05D004679 ORTHO05D005524 9.9e-48 194.5 257 50.2
Phvul.003G030600 Phaseolus vulgaris HOM05D004679 ORTHO05D005524 7.6e-40 168.3 257 42.4
VMungo1215G2497 Vigna mungo HOM05D004679 ORTHO05D005524 1.1e-38 164.5 257 46.7
Glyma.08G261000 Glycine max HOM05D004679 ORTHO05D005524 7.1e-38 161.8 268 47.0
Glyma.01G080500 Glycine max HOM05D004679 ORTHO05D005524 2.3e-36 156.8 272 44.9
Psat6g226440 Pisum sativum HOM05D004679 ORTHO05D005524 3.3e-35 152.9 263 39.5
Ca_11162_v3 Cicer arietinum L. HOM05D004679 ORTHO05D005524 7.4e-35 151.8 242 50.0
TPR.G27958 Trifolium pratense HOM05D004679 ORTHO05D005524 5.3e-33 145.6 258 41.9
arahy.Tifrunner.gnm1.ann1.ZDDP39 Arachis hypogaea HOM05D004679 ORTHO05D005524 5.8e-32 142.1 287 40.1
Glyma.20G116700 Glycine max HOM05D004679 ORTHO05D005524 5.8e-32 142.1 245 46.5
Glyma.10G273200 Glycine max HOM05D004679 ORTHO05D005524 1.3e-31 141.0 246 45.5
Lalb_Chr04g0254681 Lupinus albus HOM05D004679 ORTHO05D005524 1.3e-31 141.0 266 41.0
Lj2g0027656 Lotus japonicus HOM05D004679 ORTHO05D005524 3.2e-30 136.3 261 42.5
Lalb_Chr10g0100061 Lupinus albus HOM05D004679 ORTHO05D005524 5.5e-30 135.6 255 43.9
Psat2g095800 Pisum sativum HOM05D004679 ORTHO05D005524 1.2e-29 134.4 251 40.6
VMungo0720G2998 Vigna mungo HOM05D004679 ORTHO05D005524 1.0e-28 131.3 244 45.9
TPR.G18826 Trifolium pratense HOM05D004679 ORTHO05D005524 6.7e-28 128.6 268 43.3
Medtr5g056480 Medicago truncatula HOM05D004679 ORTHO05D005524 8.7e-28 128.3 261 40.2
Phvul.007G028300 Phaseolus vulgaris HOM05D004679 ORTHO05D005524 1.6e-26 124.0 238 44.1
Ca_07534_v3 Cicer arietinum L. HOM05D004679 ORTHO05D005524 2.9e-23 113.2 150 48.0
Medtr1g110550 Medicago truncatula HOM05D004679 ORTHO05D005524 5.5e-22 109.0 224 41.5
Dinv31629 Davidia involucrata HOM05D004679 ORTHO05D005524 9.3e-22 108.2 259 35.5
CiPaw.15G086800 Carya illinoinensis HOM05D004679 ORTHO05D005524 7.9e-21 105.1 141 38.3
TWI79G1695 Tripterygium wilfordii HOM05D004679 ORTHO05D005524 1.8e-20 104.0 269 35.3
Potri.008G121700 Populus trichocarpa HOM05D004679 ORTHO05D005524 1.1e-19 101.3 279 35.5
Potri.010G123600 Populus trichocarpa HOM05D004679 ORTHO05D005524 5.7e-19 99.0 282 35.5
Prupe.1G312600 Prunus persica HOM05D004679 ORTHO05D005524 3.7e-18 96.3 263 35.0
CiPaw.16G065600 Carya illinoinensis HOM05D004679 ORTHO05D005524 6.3e-18 95.5 108 44.4
TWI31G1336 Tripterygium wilfordii HOM05D004679 ORTHO05D005524 6.3e-18 95.5 269 33.1
MD16G1041500 Malus domestica HOM05D004679 ORTHO05D005524 1.1e-17 94.7 248 36.7
Actinidia16661 Actinidia chinensis HOM05D004679 ORTHO05D005524 1.4e-17 94.4 129 41.1
FvH4_4g27210 Fragaria vesca HOM05D004679 ORTHO05D005524 1.4e-17 94.4 269 36.8
FAN07G0705 Fragaria x ananassa HOM05D004679 ORTHO05D005524 1.4e-17 94.4 92 48.9
FAN12G2517 Fragaria x ananassa HOM05D004679 ORTHO05D005524 3.1e-17 93.2 272 35.7
FAN12G3270 Fragaria x ananassa HOM05D004679 ORTHO05D005524 4.1e-17 92.8 269 35.7
Manes.06G066900 Manihot esculenta HOM05D004679 ORTHO05D005524 6.9e-17 92.0 300 34.7
Manes.14G103500 Manihot esculenta HOM05D004679 ORTHO05D005524 9.0e-17 91.7 292 35.6
RcHm_v2.0_Chr4g0435001 Rosa chinensis HOM05D004679 ORTHO05D005524 9.0e-17 91.7 92 47.8
MD13G1040500 Malus domestica HOM05D004679 ORTHO05D005524 2.0e-16 90.5 248 32.3
Cpa.g.sc1.28 Carica papaya HOM05D004679 ORTHO05D005524 2.6e-16 90.1 177 37.9
Lj6P756T16 Lonicera japonica HOM05D004679 ORTHO05D005524 2.6e-16 90.1 263 29.7
Ciclev10015600m.g Citrus clementina HOM05D004679 ORTHO05D005524 3.4e-16 89.7 293 30.0
Oeu034235.1 Olea europaea HOM05D004679 ORTHO05D005524 4.5e-16 89.4 256 36.3
ClCG05G022630 Citrullus lanatus HOM05D004679 ORTHO05D005524 5.9e-16 89.0 107 41.1
CsaV3_5G034410 Cucumis sativus L. HOM05D004679 ORTHO05D005524 5.9e-16 89.0 107 39.3
Thecc.02G227400 Theobroma cacao HOM05D004679 ORTHO05D005524 7.7e-16 88.6 278 35.3
MELO3C012256.2 Cucumis melo HOM05D004679 ORTHO05D005524 1.0e-15 88.2 107 39.3
Cfa018585 Carpinus fangiana HOM05D004679 ORTHO05D005524 1.3e-15 87.8 290 33.1
FAN22G1304 Fragaria x ananassa HOM05D004679 ORTHO05D005524 1.3e-15 87.8 275 34.5
Sabra10G0093600 Salix brachista HOM05D004679 ORTHO05D005524 2.9e-15 86.7 300 35.7
QL01p041129 Quercus lobata HOM05D004679 ORTHO05D005524 3.8e-15 86.3 160 35.6
Haze_17496 Corylus avellana HOM05D004679 ORTHO05D005524 5.0e-15 85.9 294 32.7
Sc14g0007400 Simmondsia chinensis HOM05D004679 ORTHO05D005524 5.0e-15 85.9 91 49.5
Nitab4.5_0005548g0020 Nicotiana tabacum HOM05D004679 ORTHO05D005524 1.1e-14 84.7 235 31.1
Gorai.005G192000 Gossypium raimondii HOM05D004679 ORTHO05D005524 1.9e-14 84.0 286 29.7
Gohir.A03G147600 Gossypium hirsutum HOM05D004679 ORTHO05D005524 2.5e-14 83.6 289 29.1
CANSAT01G1145 Cannabis sativa HOM05D004679 ORTHO05D005524 5.5e-14 82.4 105 41.0
Solyc05g009420.1 Solanum lycopersicum HOM05D004679 ORTHO05D005524 5.5e-14 82.4 263 34.6
Sopen05g005230 Solanum pennellii HOM05D004679 ORTHO05D005524 5.5e-14 82.4 263 34.6
PGR102G2503 Punica granatum HOM05D004679 ORTHO05D005524 7.2e-14 82.0 262 36.3
Sabra08G0092400 Salix brachista HOM05D004679 ORTHO05D005524 7.2e-14 82.0 301 34.2
COL.COLO4_05113 Corchorus olitorius HOM05D004679 ORTHO05D005524 1.2e-13 81.3 290 28.6
THA.LOC104821925 Tarenaya hassleriana HOM05D004679 ORTHO05D005524 1.2e-13 81.3 249 35.3
Atru.chr11.115 Acer truncatum HOM05D004679 ORTHO05D005524 1.6e-13 80.9 304 33.6
Nitab4.5_0005669g0020 Nicotiana tabacum HOM05D004679 ORTHO05D005524 1.6e-13 80.9 278 29.5
MSTRG.848 Avicennia marina HOM05D004679 ORTHO05D005524 2.1e-13 80.5 290 32.1
Duzib268G0767 Durio zibethinus HOM05D004679 ORTHO05D005524 2.1e-13 80.5 295 30.5
Nitab4.5_0000057g0200 Nicotiana tabacum HOM05D004679 ORTHO05D005524 2.1e-13 80.5 229 31.4
SalBow8G2470 Salvia bowleyana HOM05D004679 ORTHO05D005524 2.1e-13 80.5 253 29.6
SGA_v2.0_scaffold38G14941 Striga asiatica HOM05D004679 ORTHO05D005524 2.7e-13 80.1 275 32.0
Nitab4.5_0003715g0040 Nicotiana tabacum HOM05D004679 ORTHO05D005524 3.6e-13 79.7 278 28.1
Migut.L01056 Erythranthe guttata HOM05D004679 ORTHO05D005524 6.1e-13 79.0 292 31.2
Rhsim09G0106900 Rhododendron simsii HOM05D004679 ORTHO05D005524 1.4e-12 77.8 244 31.1
BcaC08g46281 Brassica carinata HOM05D004679 ORTHO05D005524 2.3e-12 77.0 262 31.7
BcaC08g46285 Brassica carinata HOM05D004679 ORTHO05D005524 2.3e-12 77.0 262 31.7
Dinv21072 Davidia involucrata HOM05D004679 ORTHO05D005524 5.1e-12 75.9 107 38.3
Eucgr.B03012 Eucalyptus grandis HOM05D004679 ORTHO05D005524 5.1e-12 75.9 281 29.9
PGSC0003DMG400005982 Solanum tuberosum HOM05D004679 ORTHO05D005524 6.7e-12 75.5 232 28.4
MSTRG.7662 Avicennia marina HOM05D004679 ORTHO05D005524 8.8e-12 75.1 287 34.5
C06p41510 Brassica napus HOM05D004679 ORTHO05D005524 8.8e-12 75.1 259 32.0
BolC6t39272H Brassica oleracea HOM05D004679 ORTHO05D005524 8.8e-12 75.1 259 32.0
Solyc04g007250.1 Solanum lycopersicum HOM05D004679 ORTHO05D005524 1.1e-11 74.7 230 27.8
AT1G68440 Arabidopsis thaliana HOM05D004679 ORTHO05D005524 1.5e-11 74.3 265 30.9
CSS0017035 Camellia sinensis var. sinensis HOM05D004679 ORTHO05D005524 1.5e-11 74.3 267 35.2
Duzib248G1266 Durio zibethinus HOM05D004679 ORTHO05D005524 1.5e-11 74.3 299 31.8
PGSC0003DMG400014542 Solanum tuberosum HOM05D004679 ORTHO05D005524 1.5e-11 74.3 252 34.1
CSS0006602 Camellia sinensis var. sinensis HOM05D004679 ORTHO05D005524 2.0e-11 73.9 265 36.6
CSS0014673 Camellia sinensis var. sinensis HOM05D004679 ORTHO05D005524 2.0e-11 73.9 298 27.9
CSS0010437 Camellia sinensis var. sinensis HOM05D004679 ORTHO05D005524 2.5e-11 73.6 264 31.8
TAR371G1108 Trochodendron aralioides HOM05D004679 ORTHO05D005524 3.3e-11 73.2 270 29.3
Duzib251G0437 Durio zibethinus HOM05D004679 ORTHO05D005524 5.7e-11 72.4 294 31.0
Gohir.D02G170800 Gossypium hirsutum HOM05D004679 ORTHO05D005524 5.7e-11 72.4 100 37.0
MBI09_g16518_MAGBIO Magnolia biondii HOM05D004679 ORTHO05D005524 5.7e-11 72.4 93 36.6
AL2G27300 Arabidopsis lyrata HOM05D004679 ORTHO05D005524 9.7e-11 71.6 266 30.8
Oeu003185.3 Olea europaea HOM05D004679 ORTHO05D005524 9.7e-11 71.6 71 45.1
BcaB03g15806 Brassica carinata HOM05D004679 ORTHO05D005524 1.7e-10 70.9 261 27.2
Sopen04g002310 Solanum pennellii HOM05D004679 ORTHO05D005524 2.2e-10 70.5 230 27.8
Cc11_g10010 Coffea canephora HOM05D004679 ORTHO05D005524 3.7e-10 69.7 283 32.2
SGA_v2.0_scaffold36G14543 Striga asiatica HOM05D004679 ORTHO05D005524 3.7e-10 69.7 246 34.1
AT1G25400 Arabidopsis thaliana HOM05D004679 ORTHO05D005524 1.8e-09 67.4 241 31.1
Nn3g17866 Nelumbo nucifera HOM05D004679 ORTHO05D005524 1.8e-09 67.4 91 41.8
BcaC06g35214 Brassica carinata HOM05D004679 ORTHO05D005524 3.1e-09 66.6 242 31.4
C07p18590 Brassica napus HOM05D004679 ORTHO05D005524 3.1e-09 66.6 242 31.4
BolC7t42370H Brassica oleracea HOM05D004679 ORTHO05D005524 3.1e-09 66.6 242 31.4
A07p34850 Brassica napus HOM05D004679 ORTHO05D005524 4.1e-09 66.2 261 30.7
TAR629G3220 Trochodendron aralioides HOM05D004679 ORTHO05D005524 4.1e-09 66.2 93 40.9
Lj5g0021418 Lotus japonicus HOM05D004679 ORTHO05D005524 5.3e-09 65.9 259 37.8
Carub.0002s1495 Capsella rubella HOM05D004679 ORTHO05D005524 6.9e-09 65.5 266 31.6
Hma1.2p1_0061F.1_g033750 Hydrangea macrophylla HOM05D004679 ORTHO05D005524 9.1e-09 65.1 87 41.4
Ah.03g137540 Amaranthus hybridus HOM05D004679 ORTHO05D005524 1.2e-08 64.7 90 41.1
MELO3C011535.2 Cucumis melo HOM05D004679 ORTHO05D005524 1.5e-08 64.3 128 32.8
Thhalv10018918m.g Eutrema salsugineum HOM05D004679 ORTHO05D005524 1.5e-08 64.3 149 31.5
Sp5g23510 Schrenkiella parvula HOM05D004679 ORTHO05D005524 1.5e-08 64.3 269 30.5
CARHR061220 Cardamine hirsuta HOM05D004679 ORTHO05D005524 2.0e-08 63.9 76 38.2
Nn4g23867 Nelumbo nucifera HOM05D004679 ORTHO05D005524 2.0e-08 63.9 95 40.0
ClCG08G005010 Citrullus lanatus HOM05D004679 ORTHO05D005524 2.6e-08 63.5 277 28.2
Gorai.012G122000 Gossypium raimondii HOM05D004679 ORTHO05D005524 2.6e-08 63.5 278 24.8
BcaB05g24380 Brassica carinata HOM05D004679 ORTHO05D005524 3.4e-08 63.2 267 31.8
Gohir.A04G097850 Gossypium hirsutum HOM05D004679 ORTHO05D005524 3.4e-08 63.2 300 25.7
Sp1g22820 Schrenkiella parvula HOM05D004679 ORTHO05D005524 3.4e-08 63.2 168 29.2
BcaB03g14040 Brassica carinata HOM05D004679 ORTHO05D005524 5.9e-08 62.4 154 29.2
Sed0013939 Sechium edule HOM05D004679 ORTHO05D005524 2.9e-07 60.1 255 23.9
Sed0007978 Sechium edule HOM05D004679 ORTHO05D005524 3.8e-07 59.7 279 25.4
BraA02t06566Z Brassica rapa HOM05D004679 ORTHO05D005524 5.0e-07 59.3 76 39.5
Gohir.D04G137600 Gossypium hirsutum HOM05D004679 ORTHO05D005524 5.0e-07 59.3 278 23.7
BcaC03g14945 Brassica carinata HOM05D004679 ORTHO05D005524 6.5e-07 58.9 266 30.5
BraA07t29036Z Brassica rapa HOM05D004679 ORTHO05D005524 8.5e-07 58.5 237 27.8
A02p14990 Brassica napus HOM05D004679 ORTHO05D005524 1.1e-06 58.2 270 29.6
AL1G39920 Arabidopsis lyrata HOM05D004679 ORTHO05D005524 1.9e-06 57.4 238 30.7
A07p12580 Brassica napus HOM05D004679 ORTHO05D005524 1.9e-06 57.4 235 27.2
Sed0011079 Sechium edule HOM05D004679 ORTHO05D005524 1.9e-06 57.4 73 42.5
AUR62035202 Chenopodium quinoa HOM05D004679 ORTHO05D005524 2.5e-06 57.0 151 31.1
DCAR_026738 Daucus carota HOM05D004679 ORTHO05D005524 2.5e-06 57.0 97 35.1
Peaxi162Scf00753g00057 Petunia axillaris HOM05D004679 ORTHO05D005524 9.4e-06 55.1 45 51.1


User provided reference genes

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