Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr21g0308351 Lupinus albus HOM05D006149 ORTHO05D007341 1.9e-58 229.6 122 100.0
Ca_11076_v3 Cicer arietinum L. HOM05D006149 ORTHO05D007341 2.0e-44 183.0 122 80.3
Phvul.007G040000 Phaseolus vulgaris HOM05D006149 ORTHO05D007341 3.8e-43 178.7 122 80.3
arahy.Tifrunner.gnm1.ann1.0F7AFP Arachis hypogaea HOM05D006149 ORTHO05D007341 1.1e-42 177.2 123 78.9
Lj5g0003815 Lotus japonicus HOM05D006149 ORTHO05D007341 1.1e-42 177.2 122 79.5
VMungo0720G1566 Vigna mungo HOM05D006149 ORTHO05D007341 1.5e-42 176.8 122 78.7
arahy.Tifrunner.gnm1.ann1.GUMB1Z Arachis hypogaea HOM05D006149 ORTHO05D007341 3.3e-42 175.6 123 78.0
Medtr1g107435 Medicago truncatula HOM05D006149 ORTHO05D007341 5.6e-42 174.9 122 78.7
Glyma.10G262200 Glycine max HOM05D006149 ORTHO05D007341 7.2e-42 174.5 122 77.0
Glyma.20G128800 Glycine max HOM05D006149 ORTHO05D007341 7.2e-42 174.5 122 78.7
Psat6g219120 Pisum sativum HOM05D006149 ORTHO05D007341 8.0e-41 171.0 122 77.0
Potri.001G300300 Populus trichocarpa HOM05D006149 ORTHO05D007341 8.0e-41 171.0 123 74.8
CANSAT25G3711 Cannabis sativa HOM05D006149 ORTHO05D007341 5.2e-40 168.3 121 73.6
PGR142G0815 Punica granatum HOM05D006149 ORTHO05D007341 6.8e-40 167.9 125 70.4
RcHm_v2.0_Chr6g0255351 Rosa chinensis HOM05D006149 ORTHO05D007341 1.5e-39 166.8 122 72.1
TWI32G0763 Tripterygium wilfordii HOM05D006149 ORTHO05D007341 9.8e-39 164.1 124 71.0
MD05G1089500 Malus domestica HOM05D006149 ORTHO05D007341 1.3e-38 163.7 130 68.5
Prupe.8G134800 Prunus persica HOM05D006149 ORTHO05D007341 4.9e-38 161.8 114 75.4
Sabra09G0073900 Salix brachista HOM05D006149 ORTHO05D007341 4.9e-38 161.8 123 71.5
Manes.10G076500 Manihot esculenta HOM05D006149 ORTHO05D007341 3.2e-37 159.1 123 69.9
Gohir.A03G186300 Gossypium hirsutum HOM05D006149 ORTHO05D007341 5.4e-37 158.3 122 71.3
Gohir.D02G207100 Gossypium hirsutum HOM05D006149 ORTHO05D007341 5.4e-37 158.3 122 71.3
Gorai.005G235000 Gossypium raimondii HOM05D006149 ORTHO05D007341 5.4e-37 158.3 122 71.3
Hund06318 Selenicereus undatus HOM05D006149 ORTHO05D007341 5.4e-37 158.3 129 68.2
Cpa.g.sc76.22 Carica papaya HOM05D006149 ORTHO05D007341 2.0e-36 156.4 129 68.2
COL.COLO4_32597 Corchorus olitorius HOM05D006149 ORTHO05D007341 3.5e-36 155.6 122 69.7
CsaV3_3G018210 Cucumis sativus L. HOM05D006149 ORTHO05D007341 3.5e-36 155.6 122 73.0
TWI34G0529 Tripterygium wilfordii HOM05D006149 ORTHO05D007341 3.5e-36 155.6 125 70.4
FAN20G0990 Fragaria x ananassa HOM05D006149 ORTHO05D007341 4.6e-36 155.2 124 68.5
MELO3C019546.2 Cucumis melo HOM05D006149 ORTHO05D007341 5.9e-36 154.8 122 72.1
Nn4g25119 Nelumbo nucifera HOM05D006149 ORTHO05D007341 1.0e-35 154.1 114 72.8
ClCG05G010280 Citrullus lanatus HOM05D006149 ORTHO05D007341 1.3e-35 153.7 122 71.3
Duzib052G0317 Durio zibethinus HOM05D006149 ORTHO05D007341 1.3e-35 153.7 122 70.5
Ciclev10029393m.g Citrus clementina HOM05D006149 ORTHO05D007341 1.7e-35 153.3 122 66.4
Cfa004575 Carpinus fangiana HOM05D006149 ORTHO05D007341 2.9e-35 152.5 89 87.6
AUR62039082 Chenopodium quinoa HOM05D006149 ORTHO05D007341 5.0e-35 151.8 128 68.0
Thecc.02G107700 Theobroma cacao HOM05D006149 ORTHO05D007341 6.6e-35 151.4 122 68.9
Sp3g28510 Schrenkiella parvula HOM05D006149 ORTHO05D007341 8.6e-35 151.0 122 63.1
Sed0001717 Sechium edule HOM05D006149 ORTHO05D007341 8.6e-35 151.0 122 70.5
BcaB03g16271 Brassica carinata HOM05D006149 ORTHO05D007341 1.5e-34 150.2 122 63.1
Carub.0003s2910 Capsella rubella HOM05D006149 ORTHO05D007341 1.5e-34 150.2 122 63.9
FAN27G1351 Fragaria x ananassa HOM05D000289 ORTHO05D007341 1.5e-34 150.2 122 66.4
Thhalv10022867m.g Eutrema salsugineum HOM05D006149 ORTHO05D007341 1.9e-34 149.8 122 62.3
Nn1g04703 Nelumbo nucifera HOM05D006149 ORTHO05D007341 1.9e-34 149.8 125 68.8
Sed0008540 Sechium edule HOM05D006149 ORTHO05D007341 2.5e-34 149.4 122 69.7
FvH4_2g05220 Fragaria vesca HOM05D006149 ORTHO05D007341 3.3e-34 149.1 122 65.6
FAN15G1894 Fragaria x ananassa HOM05D006149 ORTHO05D007341 3.3e-34 149.1 122 65.6
FAN24G0478 Fragaria x ananassa HOM05D000289 ORTHO05D007341 3.3e-34 149.1 122 65.6
Sc08g0001390 Simmondsia chinensis HOM05D006149 ORTHO05D007341 4.3e-34 148.7 130 67.7
AT2G15270 Arabidopsis thaliana HOM05D006149 ORTHO05D007341 5.6e-34 148.3 122 63.1
BcaC06g36046 Brassica carinata HOM05D006149 ORTHO05D007341 7.3e-34 147.9 123 63.4
BcaC04g22139 Brassica carinata HOM05D006149 ORTHO05D007341 9.5e-34 147.5 123 62.6
C07p08530 Brassica napus HOM05D006149 ORTHO05D007341 9.5e-34 147.5 123 62.6
BolC7t41265H Brassica oleracea HOM05D006149 ORTHO05D007341 9.5e-34 147.5 123 62.6
CARHR105640 Cardamine hirsuta HOM05D006149 ORTHO05D007341 9.5e-34 147.5 122 63.1
AL3G46990 Arabidopsis lyrata HOM05D006149 ORTHO05D007341 1.6e-33 146.7 123 63.4
THA.LOC104807242 Tarenaya hassleriana HOM05D006149 ORTHO05D007341 1.6e-33 146.7 121 66.1
BcaB08g34585 Brassica carinata HOM05D006149 ORTHO05D007341 2.8e-33 146.0 122 61.5
Sabra16G0188500 Salix brachista HOM05D006149 ORTHO05D007341 2.8e-33 146.0 165 53.9
Lsat_1_v5_gn_9_111221 Lactuca sativa HOM05D006149 ORTHO05D007341 8.0e-33 144.4 115 66.1
Dinv42191 Davidia involucrata HOM05D006149 ORTHO05D007341 3.1e-32 142.5 125 64.0
Solyc01g107610.4 Solanum lycopersicum HOM05D006149 ORTHO05D007341 3.1e-32 142.5 114 67.5
ECA240G2462 Erigeron canadensis HOM05D006149 ORTHO05D007341 4.0e-32 142.1 109 72.5
CDE02G2507 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 5.2e-32 141.7 116 67.2
Eucgr.E02957 Eucalyptus grandis HOM05D006149 ORTHO05D007341 5.2e-32 141.7 125 62.4
MD05G1088900 Malus domestica HOM05D006149 ORTHO05D007341 5.2e-32 141.7 176 50.6
SHI05287 Sapria himalayana HOM05D006149 ORTHO05D007341 5.2e-32 141.7 124 66.1
ATR0618G054 Amborella trichopoda HOM05D006149 ORTHO05D007341 6.8e-32 141.4 116 69.0
Lj9A321G81 Lonicera japonica HOM05D006149 ORTHO05D007341 6.8e-32 141.4 117 66.7
TAR628G0594 Trochodendron aralioides HOM05D006149 ORTHO05D007341 6.8e-32 141.4 114 67.5
Dinv15763 Davidia involucrata HOM05D006149 ORTHO05D007341 8.9e-32 141.0 126 64.3
Aa31LG8G13110 Aethionema arabicum HOM05D006149 ORTHO05D007341 1.2e-31 140.6 129 58.1
CSS0036049 Camellia sinensis var. sinensis HOM05D006149 ORTHO05D007341 1.5e-31 140.2 129 63.6
CiPaw.05G011400 Carya illinoinensis HOM05D006149 ORTHO05D007341 1.5e-31 140.2 115 66.1
CDE02G4185 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 2.0e-31 139.8 116 66.4
Sopen01g049800 Solanum pennellii HOM05D006149 ORTHO05D007341 2.6e-31 139.4 114 66.7
PGSC0003DMG400025768 Solanum tuberosum HOM05D006149 ORTHO05D007341 2.6e-31 139.4 114 66.7
AUR62010304 Chenopodium quinoa HOM05D006149 ORTHO05D007341 4.4e-31 138.7 115 67.8
HPP92_004777 Vanilla planifolia HOM05D006149 ORTHO05D007341 7.5e-31 137.9 118 66.9
Rhsim05G0088300 Rhododendron simsii HOM05D006149 ORTHO05D007341 1.3e-30 137.1 126 60.3
CAN.G1231.7 Capsicum annuum HOM05D006149 ORTHO05D007341 1.7e-30 136.7 114 62.3
CANSAT25G0333 Cannabis sativa HOM05D006149 ORTHO05D007341 2.9e-30 136.0 114 64.9
CDE04G1609 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 2.9e-30 136.0 116 62.9
Nitab4.5_0005392g0090 Nicotiana tabacum HOM05D006149 ORTHO05D007341 2.9e-30 136.0 114 64.9
Nitab4.5_0002815g0010 Nicotiana tabacum HOM05D006149 ORTHO05D007341 4.9e-30 135.2 114 64.0
unitig_22.g5723 Utricularia gibba HOM05D006149 ORTHO05D007341 8.3e-30 134.4 117 62.4
HanXRQChr03g0070291 Helianthus annuus HOM05D006149 ORTHO05D007341 1.1e-29 134.0 123 60.2
PSO675G5876 Papaver somniferum HOM05D006149 ORTHO05D007341 1.4e-29 133.7 120 58.3
Actinidia27971 Actinidia chinensis HOM05D006149 ORTHO05D007341 1.9e-29 133.3 130 61.5
PSO541G1364 Papaver somniferum HOM05D006149 ORTHO05D007341 1.9e-29 133.3 120 59.2
vmacro19450 Vaccinium macrocarpon HOM05D006149 ORTHO05D007341 2.4e-29 132.9 115 64.3
QL11p033743 Quercus lobata HOM05D006149 ORTHO05D007341 4.1e-29 132.1 130 61.5
Peaxi162Scf00016g02334 Petunia axillaris HOM05D006149 ORTHO05D007341 5.4e-29 131.7 114 64.0
Migut.B00388 Erythranthe guttata HOM05D006149 ORTHO05D007341 7.0e-29 131.3 121 62.0
SGA_v2.0_scaffold225G43080 Striga asiatica HOM05D006149 ORTHO05D007341 7.0e-29 131.3 114 62.3
Aqoxy3G02908 Aquilegia oxysepala HOM05D006149 ORTHO05D007341 1.6e-28 130.2 123 61.8
A07p05350 Brassica napus HOM05D006149 ORTHO05D007341 1.6e-28 130.2 124 58.1
BraA07t28328Z Brassica rapa HOM05D006149 ORTHO05D007341 1.6e-28 130.2 124 58.1
MSTRG.16714 Avicennia marina HOM05D006149 ORTHO05D007341 3.5e-28 129.0 116 62.9
SalBow6G4084 Salvia bowleyana HOM05D006149 ORTHO05D007341 4.6e-28 128.6 86 77.9
Zm00001eb393310 Zea mays HOM05D006149 ORTHO05D007341 7.8e-28 127.9 81 80.2
Os09g0104300 Oryza sativa ssp. japonica HOM05D006149 ORTHO05D007341 3.0e-27 125.9 80 80.0
Pp3c2_21780 Physcomitrium patens HOM05D006149 ORTHO05D007341 5.0e-27 125.2 128 60.2
Zm00001eb020500 Zea mays HOM05D006149 ORTHO05D007341 5.0e-27 125.2 114 63.2
Pp3c1_15220 Physcomitrium patens HOM05D006149 ORTHO05D007341 7.3e-26 121.3 127 57.5
THA.LOC104819555 Tarenaya hassleriana HOM05D006149 ORTHO05D007341 7.3e-26 121.3 73 83.6
AagrBONN_evm.TU.Sc2ySwM_228.2976 Anthoceros agrestis HOM05D006149 ORTHO05D007341 9.5e-26 120.9 77 76.6
SMO364G0740 Selaginella moellendorffii HOM05D006149 ORTHO05D007341 2.1e-25 119.8 79 74.7
Oeu017469.1 Olea europaea HOM05D006149 ORTHO05D007341 2.8e-25 119.4 114 58.8
SEGI_00829 Sequoiadendron giganteum HOM05D006149 ORTHO05D007341 6.2e-25 118.2 101 63.4
Duzib248G1531 Durio zibethinus HOM05D006149 ORTHO05D007341 8.1e-25 117.9 122 62.3
Mapoly0056s0071 Marchantia polymorpha HOM05D006149 ORTHO05D007341 8.9e-24 114.4 112 57.1
Rhsim11G0160200 Rhododendron simsii HOM05D006149 ORTHO05D007341 1.2e-23 114.0 169 45.0
HanXRQChr02g0033021 Helianthus annuus HOM05D006149 ORTHO05D007341 2.0e-23 113.2 111 57.7
DCAR_001643 Daucus carota HOM05D006149 ORTHO05D007341 7.5e-23 111.3 101 63.4
CBR_g44544 Chara braunii HOM05D006149 ORTHO05D007341 1.2e-20 104.0 78 73.1
EL10Ac9g22279 Beta vulgaris HOM05D006149 ORTHO05D007341 2.1e-20 103.2 131 50.4
vmacro02004 Vaccinium macrocarpon HOM05D006149 ORTHO05D007341 3.5e-20 102.4 139 47.5
Ciclev10006213m.g Citrus clementina HOM05D006149 ORTHO05D007341 7.8e-20 101.3 109 53.2
Haze_10168 Corylus avellana HOM05D006149 ORTHO05D007341 8.6e-19 97.8 219 35.2
PGR042G0697 Punica granatum HOM05D006149 ORTHO05D007341 1.2e-17 94.0 71 70.4
Actinidia05494 Actinidia chinensis HOM05D006149 ORTHO05D007341 3.1e-16 89.4 85 61.2
CSS0028016 Camellia sinensis var. sinensis HOM05D006149 ORTHO05D007341 5.8e-15 85.1 91 57.1
MBI12_g27878_MAGBIO Magnolia biondii HOM05D006149 ORTHO05D007341 2.4e-13 79.7 74 60.8
TAR376G0787 Trochodendron aralioides HOM05D006149 ORTHO05D007341 3.2e-13 79.3 77 58.4
Cre03.g193150 Chlamydomonas reinhardtii HOM05D006149 ORTHO05D007341 1.9e-10 70.1 59 57.6
SMO197G0096 Selaginella moellendorffii HOM05D024641 ORTHO05D007341 1.2e-09 67.4 42 73.8
Ah.01g018230 Amaranthus hybridus HOM05D006149 ORTHO05D007341 2.4e-08 63.2 45 75.6
MCO08G345 Micromonas commoda HOM05D006149 ORTHO05D007341 9.9e-07 57.8 67 46.3
QL11p033903 Quercus lobata HOM05D006149 ORTHO05D007341 2.9e-06 56.2 38 76.3
MBI03_g28533_MAGBIO Magnolia biondii HOM05D006149 ORTHO05D007341 8.4e-06 54.7 54 53.7


User provided reference genes

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