Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr21g0308001 Lupinus albus HOM05D007571 ORTHO05D009439 1.0e-64 250.0 133 100.0
Lj5g0013426 Lotus japonicus HOM05D007571 ORTHO05D009439 5.5e-42 174.5 124 77.4
Glyma.10G256000 Glycine max HOM05D007571 ORTHO05D009439 9.4e-42 173.7 135 74.8
VMungo0720G0585 Vigna mungo HOM05D007571 ORTHO05D009439 8.8e-40 167.2 123 76.4
QL11p029955 Quercus lobata HOM05D007571 ORTHO05D009439 2.6e-39 165.6 133 69.2
Phvul.007G046800 Phaseolus vulgaris HOM05D007571 ORTHO05D009439 4.8e-38 161.4 124 71.8
TPR.G21146 Trifolium pratense HOM05D007571 ORTHO05D009439 8.2e-38 160.6 132 70.5
arahy.Tifrunner.gnm1.ann1.A1M8SQ Arachis hypogaea HOM05D007571 ORTHO05D009439 2.4e-37 159.1 128 72.7
arahy.Tifrunner.gnm1.ann1.I40GDJ Arachis hypogaea HOM05D007571 ORTHO05D009439 4.1e-37 158.3 128 72.7
Medtr1g106075 Medicago truncatula HOM05D007571 ORTHO05D009439 5.3e-37 157.9 134 70.9
Atru.chr5.2324 Acer truncatum HOM05D007571 ORTHO05D009439 2.0e-36 156.0 133 69.9
MD10G1108300 Malus domestica HOM05D007571 ORTHO05D009439 5.9e-36 154.5 132 65.2
CANSAT25G0272 Cannabis sativa HOM05D007571 ORTHO05D009439 4.2e-34 148.3 133 62.4
CANSAT25G2750 Cannabis sativa HOM05D007571 ORTHO05D009439 4.2e-34 148.3 133 62.4
Haze_10272 Corylus avellana HOM05D007571 ORTHO05D009439 4.2e-34 148.3 131 64.9
Prupe.8G147200 Prunus persica HOM05D007571 ORTHO05D009439 5.5e-34 147.9 132 62.9
RcHm_v2.0_Chr6g0252541 Rosa chinensis HOM05D007571 ORTHO05D009439 2.7e-33 145.6 132 63.6
Medtr3g008630 Medicago truncatula HOM05D007571 ORTHO05D009439 6.1e-33 144.4 134 65.7
Ciclev10029547m.g Citrus clementina HOM05D007571 ORTHO05D009439 1.8e-32 142.9 139 62.6
FAN20G2923 Fragaria x ananassa HOM05D007571 ORTHO05D009439 2.3e-32 142.5 132 62.1
Thecc.02G118900 Theobroma cacao HOM05D007571 ORTHO05D009439 2.3e-32 142.5 148 58.1
FvH4_2g03581 Fragaria vesca HOM05D007571 ORTHO05D009439 3.0e-32 142.1 132 61.4
Sed0007395 Sechium edule HOM05D007571 ORTHO05D009439 3.0e-32 142.1 139 61.9
TWI59G0511 Tripterygium wilfordii HOM05D007571 ORTHO05D009439 3.0e-32 142.1 133 61.7
Potri.001G292000 Populus trichocarpa HOM05D007571 ORTHO05D009439 1.5e-31 139.8 136 58.1
Duzib052G0547 Durio zibethinus HOM05D007571 ORTHO05D009439 3.4e-31 138.7 146 56.8
Gohir.D12G019350 Gossypium hirsutum HOM05D007571 ORTHO05D009439 4.8e-30 134.8 147 55.8
CsaV3_7G007730 Cucumis sativus L. HOM05D007571 ORTHO05D009439 6.3e-30 134.4 134 61.2
Gohir.A12G018900 Gossypium hirsutum HOM05D007571 ORTHO05D009439 6.3e-30 134.4 147 55.1
MELO3C018528.2 Cucumis melo HOM05D007571 ORTHO05D009439 3.1e-29 132.1 135 60.7
THA.LOC104825387 Tarenaya hassleriana HOM05D007571 ORTHO05D009439 4.1e-29 131.7 133 60.2
Thhalv10011862m.g Eutrema salsugineum HOM05D007571 ORTHO05D009439 2.7e-28 129.0 131 58.0
GSVIVG01037807001 Vitis vinifera HOM05D007571 ORTHO05D009439 2.7e-28 129.0 122 61.5
Actinidia04391 Actinidia chinensis HOM05D007571 ORTHO05D009439 5.9e-28 127.9 92 75.0
Actinidia27996 Actinidia chinensis HOM05D007571 ORTHO05D009439 1.3e-27 126.7 121 62.0
AL1G57530 Arabidopsis lyrata HOM05D007571 ORTHO05D009439 2.2e-27 125.9 132 61.4
Eucgr.G01203 Eucalyptus grandis HOM05D007571 ORTHO05D009439 2.9e-27 125.6 134 56.0
Carub.0001s3916 Capsella rubella HOM05D007571 ORTHO05D009439 3.8e-27 125.2 131 57.3
AT1G49975 Arabidopsis thaliana HOM05D007571 ORTHO05D009439 5.0e-27 124.8 131 58.0
Sp1g36830 Schrenkiella parvula HOM05D007571 ORTHO05D009439 5.0e-27 124.8 131 58.0
COL.COLO4_32496 Corchorus olitorius HOM05D007571 ORTHO05D009439 6.5e-27 124.4 140 55.0
vmacro19538 Vaccinium macrocarpon HOM05D007571 ORTHO05D009439 6.5e-27 124.4 86 70.9
TAR628G1270 Trochodendron aralioides HOM05D007571 ORTHO05D009439 1.2e-25 120.2 129 54.3
CSS0048413 Camellia sinensis var. sinensis HOM05D007571 ORTHO05D009439 4.7e-25 118.2 128 55.5
PGR042G0328 Punica granatum HOM05D007571 ORTHO05D009439 6.1e-25 117.9 145 53.1
A06p03470 Brassica napus HOM05D007571 ORTHO05D009439 8.0e-25 117.5 131 55.7
BraA06t23555Z Brassica rapa HOM05D007571 ORTHO05D009439 8.0e-25 117.5 131 55.7
Sabra16G0182000 Salix brachista HOM05D007571 ORTHO05D009439 8.0e-25 117.5 173 42.2
BcaB07g33447 Brassica carinata HOM05D007571 ORTHO05D009439 1.0e-24 117.1 134 56.0
C06p04720 Brassica napus HOM05D007571 ORTHO05D009439 1.4e-24 116.7 131 55.7
Dinv15820 Davidia involucrata HOM05D007571 ORTHO05D009439 1.8e-24 116.3 101 63.4
ClCG02G007100 Citrullus lanatus HOM05D007571 ORTHO05D009439 3.0e-24 115.5 138 55.8
Gohir.D12G019400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 4.0e-24 115.2 150 50.7
BcaC08g43171 Brassica carinata HOM05D007571 ORTHO05D009439 8.8e-24 114.0 132 56.8
Gorai.008G019700 Gossypium raimondii HOM05D005832 ORTHO05D007117 2.0e-23 112.8 137 52.6
Aqoxy6G02559 Aquilegia oxysepala HOM05D007571 ORTHO05D009439 5.7e-23 111.3 130 53.1
Cc02_g09420 Coffea canephora HOM05D007571 ORTHO05D009439 5.7e-23 111.3 108 56.5
Rhsim05G0092500 Rhododendron simsii HOM05D007571 ORTHO05D009439 7.5e-23 110.9 122 50.8
Hund06510 Selenicereus undatus HOM05D007571 ORTHO05D009439 2.2e-22 109.4 122 53.3
ECA238G3778 Erigeron canadensis HOM05D007571 ORTHO05D009439 3.7e-22 108.6 84 70.2
PSO675G4064 Papaver somniferum HOM05D007571 ORTHO05D009439 8.3e-22 107.5 130 50.0
Nitab4.5_0017347g0020 Nicotiana tabacum HOM05D007571 ORTHO05D009439 1.1e-21 107.1 121 53.7
Solyc05g150152.1 Solanum lycopersicum HOM05D007571 ORTHO05D009439 1.1e-21 107.1 111 51.4
PSO541G4064 Papaver somniferum HOM05D007571 ORTHO05D009439 2.4e-21 105.9 129 51.2
Sopen05g033610 Solanum pennellii HOM05D007571 ORTHO05D009439 2.4e-21 105.9 111 50.5
Lsat_1_v5_gn_2_105800 Lactuca sativa HOM05D007571 ORTHO05D009439 4.1e-21 105.1 111 57.7
Peaxi162Scf00519g00423 Petunia axillaris HOM05D007571 ORTHO05D009439 7.0e-21 104.4 125 50.4
Nitab4.5_0000687g0180 Nicotiana tabacum HOM05D007571 ORTHO05D009439 9.1e-21 104.0 121 52.1
HanXRQChr02g0053531 Helianthus annuus HOM05D007571 ORTHO05D009439 1.2e-20 103.6 121 54.5
Nn6g34507 Nelumbo nucifera HOM05D007571 ORTHO05D009439 1.2e-20 103.6 92 58.7
CAN.G1433.5 Capsicum annuum HOM05D007571 ORTHO05D009439 1.6e-20 103.2 123 49.6
Ah.01g007010 Amaranthus hybridus HOM05D007571 ORTHO05D009439 3.5e-20 102.1 79 68.4
BolC6t35600H Brassica oleracea HOM05D007571 ORTHO05D009439 4.5e-20 101.7 161 47.2
Sc05g0005590 Simmondsia chinensis HOM05D007571 ORTHO05D009439 4.5e-20 101.7 88 67.0
EL10Ac9g22184 Beta vulgaris HOM05D007571 ORTHO05D009439 8.6e-19 97.4 131 50.4
MSTRG.417 Avicennia marina HOM05D007571 ORTHO05D009439 1.1e-18 97.1 99 60.6
Oeu024805.1 Olea europaea HOM05D007571 ORTHO05D009439 1.1e-18 97.1 88 62.5
MBI16_g39621_MAGBIO Magnolia biondii HOM05D007571 ORTHO05D009439 3.3e-18 95.5 128 48.4
MBI16_g43666_MAGBIO Magnolia biondii HOM05D007571 ORTHO05D009439 3.3e-18 95.5 128 48.4
AUR62030860 Chenopodium quinoa HOM05D007571 ORTHO05D009439 7.2e-18 94.4 73 69.9
DCAR_028375 Daucus carota HOM05D007571 ORTHO05D009439 2.1e-17 92.8 121 51.2
CDE04G1832 Ceratophyllum demersum HOM05D007571 ORTHO05D009439 6.1e-17 91.3 87 57.5
Migut.F01585 Erythranthe guttata HOM05D007571 ORTHO05D009439 2.3e-16 89.4 67 70.1
CiPaw.05G019300 Carya illinoinensis HOM05D000470 ORTHO05D000348 3.0e-16 89.0 79 63.3
SalBow6G2573 Salvia bowleyana HOM05D007571 ORTHO05D009439 3.0e-16 89.0 85 61.2
Os03g0731100 Oryza sativa ssp. japonica HOM05D007571 ORTHO05D009439 6.8e-16 87.8 86 58.1
ATR0739G046 Amborella trichopoda HOM05D007571 ORTHO05D009439 2.0e-15 86.3 62 69.4
CARHR040010 Cardamine hirsuta HOM05D007571 ORTHO05D009439 7.5e-15 84.3 65 63.1
PGSC0003DMG400023397 Solanum tuberosum HOM05D007571 ORTHO05D009439 8.3e-14 80.9 63 65.1
Manes.07G054000 Manihot esculenta HOM05D007571 ORTHO05D009439 3.2e-13 79.0 88 59.1
SEGI_38446 Sequoiadendron giganteum HOM05D007571 ORTHO05D009439 2.0e-12 76.3 75 54.7
Zm00001eb056210 Zea mays HOM05D007571 ORTHO05D009439 3.5e-12 75.5 86 51.2
SGA_v2.0_scaffold62G21311 Striga asiatica HOM05D007002 ORTHO05D008602 1.7e-11 73.2 61 65.6
Aa31LG10G4150 Aethionema arabicum HOM05D007571 ORTHO05D009439 9.5e-10 67.4 94 54.3
Potri.009G086400 Populus trichocarpa HOM05D007571 ORTHO05D009439 2.1e-09 66.2 84 48.8
AagrBONN_evm.TU.Sc2ySwM_228.3762 Anthoceros agrestis HOM05D007571 ORTHO05D009439 2.8e-09 65.9 65 50.8
CBR_g6736 Chara braunii HOM05D007571 ORTHO05D009439 4.4e-07 58.5 64 46.9
Cre02.g086100 Chlamydomonas reinhardtii HOM05D007571 ORTHO05D009439 8.3e-06 54.3 72 44.4
SalBow6G2452 Salvia bowleyana HOM05D007571 ORTHO05D009439 8.3e-06 54.3 66 53.0


User provided reference genes

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