Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr21g0307811 Lupinus albus HOM05D003755 ORTHO05D004385 2.8e-191 671.8 343 100.0
Glyma.20G141900 Glycine max HOM05D003755 ORTHO05D004385 2.5e-139 499.2 341 72.7
Glyma.10G251600 Glycine max HOM05D003755 ORTHO05D004385 4.3e-139 498.4 338 74.9
VMungo0720G2911 Vigna mungo HOM05D003755 ORTHO05D004385 1.2e-138 496.9 338 74.9
Medtr1g105470 Medicago truncatula HOM05D003755 ORTHO05D004385 4.7e-138 495.0 335 73.7
Psat6g210560 Pisum sativum HOM05D003755 ORTHO05D004385 2.6e-136 489.2 344 71.8
Lj5g0019176 Lotus japonicus HOM05D003755 ORTHO05D004385 5.8e-136 488.0 345 71.9
Phvul.007G053000 Phaseolus vulgaris HOM05D003755 ORTHO05D004385 5.8e-136 488.0 317 76.3
Ca_10975_v3 Cicer arietinum L. HOM05D003755 ORTHO05D004385 8.4e-135 484.2 320 74.7
CANSAT56G3751 Cannabis sativa HOM05D003755 ORTHO05D004385 2.6e-128 462.6 335 68.4
Cfa000266 Carpinus fangiana HOM05D003755 ORTHO05D004385 2.6e-128 462.6 337 68.0
Ciclev10015811m.g Citrus clementina HOM05D003755 ORTHO05D004385 9.3e-126 454.1 348 66.4
Prupe.4G025400 Prunus persica HOM05D003755 ORTHO05D004385 2.7e-125 452.6 341 66.0
TWI38G1222 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 5.1e-124 448.4 338 65.1
PGR004G2273 Punica granatum HOM05D003755 ORTHO05D004385 1.1e-123 447.2 339 65.8
TWI38G1592 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 2.5e-123 446.0 337 64.4
CsaV3_6G049210 Cucumis sativus L. HOM05D003755 ORTHO05D004385 2.8e-122 442.6 342 66.4
FAN21G0915 Fragaria x ananassa HOM05D003755 ORTHO05D004385 4.8e-122 441.8 333 67.0
MELO3C007374.2 Cucumis melo HOM05D003755 ORTHO05D004385 6.2e-122 441.4 344 66.0
Lalb_Chr06g0164871 Lupinus albus HOM05D003755 ORTHO05D004385 6.2e-122 441.4 343 66.5
ClCG01G022150 Citrullus lanatus HOM05D003755 ORTHO05D004385 8.1e-122 441.0 342 65.8
Eucgr.E04113 Eucalyptus grandis HOM05D003755 ORTHO05D004385 1.1e-121 440.7 322 67.1
MD00G1180300 Malus domestica HOM05D003755 ORTHO05D004385 3.1e-121 439.1 347 63.7
FvH4_3g02600 Fragaria vesca HOM05D003755 ORTHO05D004385 9.0e-121 437.6 339 67.0
QL05p074736 Quercus lobata HOM05D003755 ORTHO05D004385 1.2e-120 437.2 332 65.7
CiPaw.09G088000 Carya illinoinensis HOM05D003755 ORTHO05D004385 1.5e-120 436.8 344 64.5
Manes.16G011500 Manihot esculenta HOM05D003755 ORTHO05D004385 5.8e-120 434.9 340 64.1
TAR626G0320 Trochodendron aralioides HOM05D003755 ORTHO05D004385 1.1e-118 430.6 350 64.9
Cpa.g.sc198.13 Carica papaya HOM05D003755 ORTHO05D004385 1.4e-118 430.3 338 63.3
FAN25G0829 Fragaria x ananassa HOM05D003755 ORTHO05D004385 2.1e-117 426.4 327 66.7
MBI18_g01410_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 1.3e-116 423.7 340 65.6
Thecc.06G215100 Theobroma cacao HOM05D003755 ORTHO05D004385 1.3e-116 423.7 346 62.7
Duzib160G0429 Durio zibethinus HOM05D003755 ORTHO05D004385 3.0e-116 422.5 343 64.1
Hma1.2p1_0091F.1_g046190 Hydrangea macrophylla HOM05D003755 ORTHO05D004385 5.1e-116 421.8 344 63.4
Atru.chr10.2154 Acer truncatum HOM05D003755 ORTHO05D004385 6.7e-116 421.4 362 61.3
Duzib192G0935 Durio zibethinus HOM05D003755 ORTHO05D004385 8.7e-116 421.0 337 64.1
Gohir.A06G145950 Gossypium hirsutum HOM05D003755 ORTHO05D004385 1.9e-115 419.9 350 63.1
AUR62012654 Chenopodium quinoa HOM05D003755 ORTHO05D004385 2.1e-114 416.4 342 62.3
Aqoxy4G01977 Aquilegia oxysepala HOM05D003755 ORTHO05D004385 1.1e-113 414.1 340 63.2
MD10G1315200 Malus domestica HOM05D003755 ORTHO05D004385 3.1e-113 412.5 330 63.9
CSS0014334 Camellia sinensis var. sinensis HOM05D003755 ORTHO05D004385 6.9e-113 411.4 316 67.4
THA.LOC104809515 Tarenaya hassleriana HOM05D003755 ORTHO05D004385 6.9e-113 411.4 342 61.7
Thhalv10023566m.g Eutrema salsugineum HOM05D003755 ORTHO05D004385 9.0e-113 411.0 343 61.8
Sp2g02750 Schrenkiella parvula HOM05D003755 ORTHO05D004385 9.0e-113 411.0 349 60.7
THA.LOC104823520 Tarenaya hassleriana HOM05D003755 ORTHO05D004385 9.0e-113 411.0 340 61.5
TAR624G0284 Trochodendron aralioides HOM05D003755 ORTHO05D004385 9.0e-113 411.0 340 63.8
PSO541G6483 Papaver somniferum HOM05D003755 ORTHO05D004385 1.2e-112 410.6 339 65.8
Atru.chr10.2153 Acer truncatum HOM05D003755 ORTHO05D004385 1.5e-112 410.2 354 61.6
Dinv17826 Davidia involucrata HOM05D003755 ORTHO05D004385 1.5e-112 410.2 317 66.2
Aa31LG2G9060 Aethionema arabicum HOM05D003755 ORTHO05D004385 2.0e-112 409.8 349 61.0
BcaC06g31863 Brassica carinata HOM05D003755 ORTHO05D004385 2.6e-112 409.5 350 61.4
PSO675G2634 Papaver somniferum HOM05D003755 ORTHO05D004385 3.4e-112 409.1 339 65.2
A01p30670 Brassica napus HOM05D003755 ORTHO05D004385 1.7e-111 406.8 349 61.3
A01p30690 Brassica napus HOM05D003755 ORTHO05D004385 1.7e-111 406.8 349 61.3
Sabra11G0016200 Salix brachista HOM05D003755 ORTHO05D004385 1.7e-111 406.8 354 61.3
Sabra11G0021900 Salix brachista HOM05D003755 ORTHO05D004385 1.7e-111 406.8 354 61.3
C01p39060 Brassica napus HOM05D003755 ORTHO05D004385 2.2e-111 406.4 349 61.0
BolC1t03856H Brassica oleracea HOM05D003755 ORTHO05D004385 2.2e-111 406.4 349 61.0
Potri.011G025700 Populus trichocarpa HOM05D003755 ORTHO05D004385 2.2e-111 406.4 356 61.0
BraA01t03198Z Brassica rapa HOM05D003755 ORTHO05D004385 2.9e-111 406.0 349 61.0
BcaC02g10535 Brassica carinata HOM05D003755 ORTHO05D004385 6.5e-111 404.8 351 60.7
C04p27760 Brassica napus HOM05D003755 ORTHO05D004385 6.5e-111 404.8 351 60.7
BolC4t24319H Brassica oleracea HOM05D003755 ORTHO05D004385 6.5e-111 404.8 351 60.7
Manes.17G035900 Manihot esculenta HOM05D003755 ORTHO05D004385 1.1e-110 404.1 349 59.6
Ah.09g235250 Amaranthus hybridus HOM05D003755 ORTHO05D004385 3.2e-110 402.5 345 60.0
BcaB04g20374 Brassica carinata HOM05D003755 ORTHO05D004385 3.2e-110 402.5 349 59.3
Gohir.D05G171400 Gossypium hirsutum HOM05D003755 ORTHO05D004385 7.1e-110 401.4 339 61.4
CARHR050550 Cardamine hirsuta HOM05D003755 ORTHO05D004385 1.2e-109 400.6 349 59.6
CSS0017235 Camellia sinensis var. sinensis HOM05D003755 ORTHO05D004385 2.1e-109 399.8 316 64.9
EL10Ac8g19999 Beta vulgaris HOM05D003755 ORTHO05D004385 2.7e-109 399.4 336 62.5
Gohir.A05G168300 Gossypium hirsutum HOM05D003755 ORTHO05D004385 4.6e-109 398.7 339 60.8
COL.COLO4_31737 Corchorus olitorius HOM05D003755 ORTHO05D004385 1.3e-108 397.1 346 59.8
TPR.G5472 Trifolium pratense HOM05D003755 ORTHO05D004385 6.7e-108 394.8 256 74.2
AL2G14320 Arabidopsis lyrata HOM05D003755 ORTHO05D004385 1.1e-107 394.0 349 59.0
AT1G61790 Arabidopsis thaliana HOM05D003755 ORTHO05D004385 1.5e-107 393.7 349 58.7
Sc05g0008910 Simmondsia chinensis HOM05D003755 ORTHO05D004385 1.9e-107 393.3 342 59.1
Carub.0002s0327 Capsella rubella HOM05D003755 ORTHO05D004385 3.3e-107 392.5 349 59.3
Oeu016525.1 Olea europaea HOM05D003755 ORTHO05D004385 4.3e-107 392.1 339 61.4
Nn1g07049 Nelumbo nucifera HOM05D003755 ORTHO05D004385 1.6e-106 390.2 341 60.7
Sed0012988 Sechium edule HOM05D003755 ORTHO05D004385 2.2e-106 389.8 333 61.3
ECA234G3589 Erigeron canadensis HOM05D003755 ORTHO05D004385 4.8e-106 388.7 339 59.6
Sopen03g005650 Solanum pennellii HOM05D003755 ORTHO05D004385 9.0e-105 384.4 346 59.2
ATR0109G031 Amborella trichopoda HOM05D003755 ORTHO05D004385 1.2e-104 384.0 340 56.8
Gohir.D09G069500 Gossypium hirsutum HOM05D003755 ORTHO05D004385 1.2e-104 384.0 346 55.8
Gorai.006G083700 Gossypium raimondii HOM05D003755 ORTHO05D004385 1.2e-104 384.0 346 55.8
PGSC0003DMG400024071 Solanum tuberosum HOM05D003755 ORTHO05D004385 1.2e-104 384.0 346 59.0
Solyc03g031790.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 4.5e-104 382.1 346 59.5
Migut.H01555 Erythranthe guttata HOM05D003755 ORTHO05D004385 5.9e-104 381.7 318 61.0
Lsat_1_v5_gn_4_58721 Lactuca sativa HOM05D003755 ORTHO05D004385 5.9e-104 381.7 336 58.3
DCAR_028162 Daucus carota HOM05D003755 ORTHO05D004385 1.3e-103 380.6 337 59.9
MSTRG.14647 Avicennia marina HOM05D003755 ORTHO05D004385 1.2e-101 374.0 342 57.0
Os03g0565100 Oryza sativa ssp. japonica HOM05D003755 ORTHO05D004385 1.6e-101 373.6 335 57.0
Thhalv10008090m.g Eutrema salsugineum HOM05D003755 ORTHO05D004385 1.4e-100 370.5 349 55.9
Cc02_g11630 Coffea canephora HOM05D003755 ORTHO05D004385 1.8e-100 370.2 348 56.9
Zm00001eb043070 Zea mays HOM05D003755 ORTHO05D004385 8.8e-100 367.9 319 58.6
CDE05G0706 Ceratophyllum demersum HOM05D003755 ORTHO05D004385 5.7e-99 365.2 321 56.7
unitig_26.g9395 Utricularia gibba HOM05D003755 ORTHO05D004385 2.8e-98 362.8 320 57.8
Dinv20022 Davidia involucrata HOM05D003755 ORTHO05D004385 1.4e-97 360.5 315 61.3
Rhsim13G0157400 Rhododendron simsii HOM05D003755 ORTHO05D004385 4.5e-96 355.5 270 68.5
AL1G22670 Arabidopsis lyrata HOM05D003755 ORTHO05D004385 1.3e-95 354.0 332 55.1
Nitab4.5_0000091g0500 Nicotiana tabacum HOM05D003755 ORTHO05D004385 6.5e-95 351.7 341 56.6
Sp1g10170 Schrenkiella parvula HOM05D003755 ORTHO05D004385 6.5e-95 351.7 336 55.7
Gorai.010G177400 Gossypium raimondii HOM05D003755 ORTHO05D004385 1.1e-94 350.9 350 55.7
Lj2A272T65 Lonicera japonica HOM05D003755 ORTHO05D004385 1.1e-94 350.9 345 56.5
AT1G11560 Arabidopsis thaliana HOM05D003755 ORTHO05D004385 1.9e-94 350.1 342 53.5
CDE11G0393 Ceratophyllum demersum HOM05D003755 ORTHO05D004385 2.1e-93 346.7 344 52.6
TWI38G0036 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 3.6e-93 345.9 334 54.5
CARHR011840 Cardamine hirsuta HOM05D003755 ORTHO05D004385 7.4e-91 338.2 334 54.8
Haze_06749 Corylus avellana HOM05D003755 ORTHO05D004385 3.1e-89 332.8 255 65.1
SEGI_11297 Sequoiadendron giganteum HOM05D003755 ORTHO05D004385 5.3e-89 332.0 316 55.1
Mapoly0061s0113 Marchantia polymorpha HOM05D003755 ORTHO05D004385 7.0e-89 331.6 338 49.1
Nitab4.5_0005793g0040 Nicotiana tabacum HOM05D003755 ORTHO05D004385 3.5e-88 329.3 345 51.6
BcaB03g13253 Brassica carinata HOM05D003755 ORTHO05D004385 1.7e-87 327.0 321 52.6
Peaxi162Scf00079g00073 Petunia axillaris HOM05D003755 ORTHO05D004385 2.9e-87 326.2 323 56.7
SGA_v2.0_scaffold89G27449 Striga asiatica HOM05D003755 ORTHO05D004385 2.9e-87 326.2 337 52.2
Carub.0001s1117 Capsella rubella HOM05D003755 ORTHO05D004385 1.9e-86 323.6 334 52.7
Gohir.D06G152000 Gossypium hirsutum HOM05D003755 ORTHO05D004385 1.9e-86 323.6 283 60.8
Sabra04G0011400 Salix brachista HOM05D003755 ORTHO05D004385 9.4e-86 321.2 399 47.6
Pp3c26_7270 Physcomitrium patens HOM05D003755 ORTHO05D004385 2.7e-85 319.7 332 48.5
C08p14530 Brassica napus HOM05D003755 ORTHO05D004385 2.3e-84 316.6 339 49.9
Nitab4.5_0002196g0020 Nicotiana tabacum HOM05D003755 ORTHO05D004385 1.1e-83 314.3 334 52.4
PGSC0003DMG400010547 Solanum tuberosum HOM05D003755 ORTHO05D004385 1.5e-83 313.9 306 55.6
Pp3c3_13650 Physcomitrium patens HOM05D003755 ORTHO05D004385 2.0e-83 313.5 318 50.9
Peaxi162Scf00241g00121 Petunia axillaris HOM05D003755 ORTHO05D004385 4.4e-83 312.4 332 52.1
SalBow8G5594 Salvia bowleyana HOM05D003755 ORTHO05D004385 9.7e-83 311.2 331 49.5
BraA08t35260Z Brassica rapa HOM05D003755 ORTHO05D004385 1.3e-82 310.8 338 49.1
BcaC07g38668 Brassica carinata HOM05D003755 ORTHO05D004385 1.7e-82 310.5 340 49.4
BolC8t49101H Brassica oleracea HOM05D003755 ORTHO05D004385 1.7e-82 310.5 340 49.4
SGA_v2.0_scaffold114G32031 Striga asiatica HOM05D003755 ORTHO05D004385 2.2e-82 310.1 330 50.6
A08p33440 Brassica napus HOM05D003755 ORTHO05D004385 3.7e-82 309.3 338 48.8
SMO118G0372 Selaginella moellendorffii HOM05D003755 ORTHO05D004385 8.2e-82 308.1 331 50.5
Sopen02g024900 Solanum pennellii HOM05D003755 ORTHO05D004385 1.4e-81 307.4 337 48.4
PGSC0003DMG400002072 Solanum tuberosum HOM05D003755 ORTHO05D004385 3.1e-81 306.2 337 48.4
Pp3c10_1910 Physcomitrium patens HOM05D003755 ORTHO05D004385 1.2e-80 304.3 333 47.1
AagrBONN_evm.TU.Sc2ySwM_362.2118 Anthoceros agrestis HOM05D003755 ORTHO05D004385 3.5e-80 302.8 336 48.2
Solyc02g080180.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 4.5e-80 302.4 337 47.5
Solyc10g008090.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 4.5e-80 302.4 325 51.7
Sopen10g003960 Solanum pennellii HOM05D003755 ORTHO05D004385 2.2e-79 300.1 325 51.7
Gohir.A09G069600 Gossypium hirsutum HOM05D003755 ORTHO05D004385 9.4e-78 294.7 305 49.8
Lsat_1_v5_gn_1_121441 Lactuca sativa HOM05D003755 ORTHO05D004385 9.4e-78 294.7 350 45.1
AagrBONN_evm.TU.Sc2ySwM_362.2344 Anthoceros agrestis HOM05D003755 ORTHO05D004385 1.2e-77 294.3 343 46.1
HanXRQChr01g0003661 Helianthus annuus HOM05D003755 ORTHO05D004385 1.2e-77 294.3 316 47.8
Lj1A1226T40 Lonicera japonica HOM05D003755 ORTHO05D004385 3.6e-77 292.7 281 57.3
CAN.G569.37 Capsicum annuum HOM05D003755 ORTHO05D004385 1.8e-76 290.4 340 47.6
AUR62021999 Chenopodium quinoa HOM05D003755 ORTHO05D004385 2.9e-71 273.1 189 68.3
Nitab4.5_0002196g0010 Nicotiana tabacum HOM05D000234 ORTHO05D004385 2.5e-70 270.0 271 54.6
Nn1g03617 Nelumbo nucifera HOM05D003755 ORTHO05D004385 2.7e-69 266.5 179 70.4
MBI06_g27714_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 1.0e-68 264.6 189 68.8
MBI14_g15203_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 2.3e-68 263.5 211 63.0
CAN.G404.10 Capsicum annuum HOM05D003755 ORTHO05D004385 8.3e-66 255.0 189 64.6
Nitab4.5_0010745g0030 Nicotiana tabacum HOM05D003755 ORTHO05D004385 1.8e-65 253.8 191 63.4
CBR_g36660 Chara braunii HOM05D003755 ORTHO05D004385 2.5e-62 243.4 333 42.3
MBI19_g26612_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 7.5e-59 231.9 183 65.0
Nitab4.5_0002347g0110 Nicotiana tabacum HOM05D003755 ORTHO05D004385 8.3e-58 228.4 189 56.6
Sed0022949 Sechium edule HOM05D003755 ORTHO05D004385 5.4e-57 225.7 210 56.2
TPR.G16992 Trifolium pratense HOM05D003755 ORTHO05D004385 1.7e-55 220.7 157 69.4
CBR_g46234 Chara braunii HOM05D003755 ORTHO05D004385 3.9e-55 219.5 337 38.3
CAN.G782.22 Capsicum annuum HOM05D003755 ORTHO05D004385 1.4e-52 211.1 244 48.8
Peaxi162Scf00427g00012 Petunia axillaris HOM05D003755 ORTHO05D004385 2.0e-51 207.2 190 51.1
Nitab4.5_0002645g0040 Nicotiana tabacum HOM05D003755 ORTHO05D004385 2.6e-51 206.8 179 56.4
Actinidia26947 Actinidia chinensis HOM05D003755 ORTHO05D004385 3.7e-42 176.4 110 77.3
Lsat_1_v5_gn_3_29240 Lactuca sativa HOM05D003755 ORTHO05D004385 2.7e-40 170.2 329 35.3
BraA01t03199Z Brassica rapa HOM05D003755 ORTHO05D004385 7.6e-35 152.1 168 53.0
CAN.G782.11 Capsicum annuum HOM05D003755 ORTHO05D004385 1.4e-33 147.9 177 50.8
Lsat_1_v5_gn_7_27941 Lactuca sativa HOM05D003755 ORTHO05D004385 3.6e-29 133.3 172 41.9
BcaC04g22351 Brassica carinata HOM05D003755 ORTHO05D004385 3.4e-27 126.7 104 62.5
Lsat_1_v5_gn_4_80500 Lactuca sativa HOM05D003755 ORTHO05D004385 6.4e-26 122.5 89 61.8
Lsat_1_v5_gn_7_47961 Lactuca sativa HOM05D003755 ORTHO05D004385 1.4e-25 121.3 92 62.0
Cre16.g675602 Chlamydomonas reinhardtii HOM05D003755 ORTHO05D004385 2.7e-24 117.1 335 30.4
QL08p007617 Quercus lobata HOM05D003755 ORTHO05D004385 5.1e-23 112.8 81 64.2
CAN.G782.12 Capsicum annuum HOM05D003755 ORTHO05D004385 2.5e-22 110.5 94 58.5
MD02G1269300 Malus domestica HOM05D003755 ORTHO05D004385 2.5e-22 110.5 77 68.8
QL10p045362 Quercus lobata HOM05D003755 ORTHO05D004385 1.3e-21 108.2 80 62.5
MD02G1269200 Malus domestica HOM05D003755 ORTHO05D004385 1.1e-20 105.1 85 58.8
C09p20250 Brassica napus HOM05D003755 ORTHO05D004385 2.8e-13 80.5 75 58.7
EL10As1g23076 Beta vulgaris HOM05D003755 ORTHO05D004385 6.2e-13 79.3 49 71.4
QL03p066087 Quercus lobata HOM05D003755 ORTHO05D004385 1.2e-11 75.1 54 64.8
BcaB07g31286 Brassica carinata HOM05D003755 ORTHO05D004385 2.9e-10 70.5 74 52.7
Lsat_1_v5_gn_7_47981 Lactuca sativa HOM05D003755 ORTHO05D004385 1.4e-09 68.2 66 53.0
BolC9t54930H Brassica oleracea HOM05D003755 ORTHO05D004385 9.3e-09 65.5 57 56.1
AagrBONN_evm.TU.Sc2ySwM_228.3672 Anthoceros agrestis HOM05D003755 ORTHO05D004385 9.6e-06 55.5 70 44.3


User provided reference genes

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