Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr21g0307731 Lupinus albus HOM05D007497 ORTHO05D009706 2.8e-280 968.0 498 100.0
Phvul.007G001000 Phaseolus vulgaris HOM05D007497 ORTHO05D009706 5.3e-239 830.9 462 88.3
TPR.G8894 Trifolium pratense HOM05D007497 ORTHO05D009706 2.9e-237 825.1 462 87.4
VMungo0720G2254 Vigna mungo HOM05D007497 ORTHO05D009706 2.5e-236 822.0 462 87.7
Lj5g0001280 Lotus japonicus HOM05D007497 ORTHO05D009706 5.5e-236 820.8 462 87.0
Glyma.20G249400 Glycine max HOM05D007497 ORTHO05D009706 2.1e-235 818.9 462 86.6
arahy.Tifrunner.gnm1.ann1.USIX8K Arachis hypogaea HOM05D007497 ORTHO05D009706 1.8e-234 815.8 462 85.7
Psat6g243880 Pisum sativum HOM05D007497 ORTHO05D009706 1.1e-233 813.1 462 86.6
QL03p051279 Quercus lobata HOM05D007497 ORTHO05D009706 7.7e-222 773.9 460 81.5
Ciclev10031387m.g Citrus clementina HOM05D007497 ORTHO05D009706 1.1e-215 753.4 461 78.3
Cfa009399 Carpinus fangiana HOM05D007497 ORTHO05D009706 2.4e-215 752.3 461 79.4
MD16G1124200 Malus domestica HOM05D007497 ORTHO05D009706 3.5e-214 748.4 462 77.9
Manes.13G007600 Manihot esculenta HOM05D007497 ORTHO05D009706 3.5e-214 748.4 462 77.5
Thecc.02G199900 Theobroma cacao HOM05D007497 ORTHO05D009706 4.5e-214 748.0 461 79.4
TAR622G0177 Trochodendron aralioides HOM05D007497 ORTHO05D009706 5.9e-214 747.7 462 77.1
CANSAT01G1986 Cannabis sativa HOM05D007497 ORTHO05D009706 1.3e-213 746.5 462 78.6
CiPaw.05G105800 Carya illinoinensis HOM05D007497 ORTHO05D009706 2.2e-213 745.7 461 78.7
Prupe.1G221400 Prunus persica HOM05D007497 ORTHO05D009706 3.8e-213 745.0 462 78.4
CSS0041912 Camellia sinensis var. sinensis HOM05D007497 ORTHO05D009706 5.0e-213 744.6 459 78.0
Atru.chr11.2380 Acer truncatum HOM05D007497 ORTHO05D009706 5.5e-212 741.1 458 77.5
RcHm_v2.0_Chr4g0429611 Rosa chinensis HOM05D007497 ORTHO05D009706 1.2e-211 740.0 462 76.6
Duzib052G0992 Durio zibethinus HOM05D007497 ORTHO05D009706 2.1e-211 739.2 469 76.3
Hma1.2p1_0275F.1_g110530 Hydrangea macrophylla HOM05D007497 ORTHO05D009706 3.6e-211 738.4 461 77.9
Gohir.D01G020400 Gossypium hirsutum HOM05D007497 ORTHO05D009706 8.0e-211 737.3 460 77.0
Gorai.002G022900 Gossypium raimondii HOM05D007497 ORTHO05D009706 8.0e-211 737.3 460 77.0
CsaV3_4G002920 Cucumis sativus L. HOM05D007497 ORTHO05D009706 6.8e-210 734.2 462 77.1
Migut.K01014 Erythranthe guttata HOM05D007497 ORTHO05D009706 2.0e-209 732.6 477 73.4
Sed0000705 Sechium edule HOM05D007497 ORTHO05D009706 1.7e-208 729.6 481 74.4
ECA233G4426 Erigeron canadensis HOM05D007497 ORTHO05D009706 4.8e-208 728.0 461 74.8
arahy.Tifrunner.gnm1.ann1.03F5C5 Arachis hypogaea HOM05D007497 ORTHO05D009706 6.3e-208 727.6 402 87.6
Hund06133 Selenicereus undatus HOM05D007497 ORTHO05D009706 6.3e-208 727.6 463 75.2
FvH4_4g23250 Fragaria vesca HOM05D007497 ORTHO05D009706 1.8e-207 726.1 462 74.5
Nn4g22236 Nelumbo nucifera HOM05D007497 ORTHO05D009706 1.8e-207 726.1 469 74.0
HanXRQChr12g0362231 Helianthus annuus HOM05D007497 ORTHO05D009706 5.4e-207 724.5 461 74.6
PGR119G1254 Punica granatum HOM05D007497 ORTHO05D009706 7.0e-207 724.2 461 75.7
DCAR_024649 Daucus carota HOM05D007497 ORTHO05D009706 3.8e-205 718.4 462 74.5
Lj1A600T68 Lonicera japonica HOM05D007497 ORTHO05D009706 1.1e-204 716.8 500 71.0
Eucgr.H04604 Eucalyptus grandis HOM05D007497 ORTHO05D009706 1.9e-204 716.1 461 73.1
GSVIVG01000925001 Vitis vinifera HOM05D007497 ORTHO05D009706 4.2e-204 714.9 486 72.0
Sabra01G0043200 Salix brachista HOM05D007497 ORTHO05D009706 5.5e-204 714.5 496 72.4
MBI07_g24745_MAGBIO Magnolia biondii HOM05D007497 ORTHO05D009706 4.7e-203 711.4 461 74.0
Ca_11429_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 6.1e-203 711.1 401 85.3
Ca_29861_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 6.1e-203 711.1 401 85.3
FAN12G1328 Fragaria x ananassa HOM05D007497 ORTHO05D009706 8.0e-203 710.7 492 70.1
FAN07G1017 Fragaria x ananassa HOM05D007497 ORTHO05D009706 5.2e-202 708.0 492 70.1
AUR62005664 Chenopodium quinoa HOM05D007497 ORTHO05D009706 8.8e-202 707.2 462 72.9
Lsat_1_v5_gn_8_147300 Lactuca sativa HOM05D007497 ORTHO05D009706 1.5e-201 706.4 464 73.3
FAN17G0169 Fragaria x ananassa HOM05D007497 ORTHO05D009706 5.7e-201 704.5 495 69.5
ATR0582G029 Amborella trichopoda HOM05D007497 ORTHO05D009706 1.7e-200 703.0 461 72.5
PSO478G2787 Papaver somniferum HOM05D007497 ORTHO05D009706 1.8e-199 699.5 494 70.0
Aqoxy5G03252 Aquilegia oxysepala HOM05D007497 ORTHO05D009706 7.0e-199 697.6 463 72.4
CDE02G2130 Ceratophyllum demersum HOM05D007497 ORTHO05D009706 3.3e-196 688.7 462 70.8
Zm00001eb133110 Zea mays HOM05D007497 ORTHO05D009706 4.2e-196 688.3 461 71.8
vmacro01041 Vaccinium macrocarpon HOM05D007497 ORTHO05D009706 1.0e-194 683.7 543 64.6
Peaxi162Scf00255g00215 Petunia axillaris HOM05D007497 ORTHO05D009706 2.3e-194 682.6 466 71.5
SEGI_22503 Sequoiadendron giganteum HOM05D007497 ORTHO05D009706 3.2e-191 672.2 461 69.2
Oeu058905.2 Olea europaea HOM05D007497 ORTHO05D009706 1.6e-190 669.8 534 63.7
unitig_747.g21120 Utricularia gibba HOM05D007497 ORTHO05D009706 2.3e-186 656.0 495 64.6
Mapoly0028s0122 Marchantia polymorpha HOM05D007497 ORTHO05D009706 9.8e-185 650.6 461 67.5
AagrBONN_evm.TU.Sc2ySwM_117.3575 Anthoceros agrestis HOM05D007497 ORTHO05D009706 1.9e-183 646.4 462 67.1
Actinidia25110 Actinidia chinensis HOM05D007497 ORTHO05D009706 2.4e-183 646.0 461 70.9
MELO3C017750.2 Cucumis melo HOM05D007497 ORTHO05D009706 1.2e-182 643.7 393 78.4
SMO164G0003 Selaginella moellendorffii HOM05D007497 ORTHO05D009706 3.6e-179 632.1 460 64.8
MSTRG.8029 Avicennia marina HOM05D007497 ORTHO05D009706 1.4e-178 630.2 401 74.8
Nitab4.5_0001771g0110 Nicotiana tabacum HOM05D007497 ORTHO05D009706 7.5e-177 624.4 461 66.6
Pp3c11_11180 Physcomitrium patens HOM05D007497 ORTHO05D009706 7.5e-177 624.4 462 66.2
Gohir.A01G021900 Gossypium hirsutum HOM05D007497 ORTHO05D009706 1.4e-175 620.2 378 78.3
Nitab4.5_0004878g0020 Nicotiana tabacum HOM05D007497 ORTHO05D009706 3.2e-175 619.0 460 66.1
Sc04g0010370 Simmondsia chinensis HOM05D007497 ORTHO05D009706 3.9e-173 612.1 458 65.5
SGA_v2.0_scaffold228G43249 Striga asiatica HOM05D007497 ORTHO05D009706 9.5e-172 607.4 477 63.1
AUR62028889 Chenopodium quinoa HOM05D007497 ORTHO05D009706 2.2e-168 596.3 416 69.5
ClCG07G015350 Citrullus lanatus HOM05D007497 ORTHO05D009706 3.5e-166 589.0 492 61.6
HPP92_024455 Vanilla planifolia HOM05D007497 ORTHO05D009706 8.6e-165 584.3 374 74.1
Rhsim12G0023000 Rhododendron simsii HOM05D007497 ORTHO05D009706 1.5e-164 583.6 461 64.2
Cc11_g17320 Coffea canephora HOM05D007497 ORTHO05D009706 5.8e-161 571.6 365 75.3
EL10Ac6g13550 Beta vulgaris HOM05D007497 ORTHO05D009706 3.9e-157 558.9 462 61.9
SalBow2G2186 Salvia bowleyana HOM05D007497 ORTHO05D009706 1.9e-148 530.0 368 70.4
Sopen01g005520 Solanum pennellii HOM05D007497 ORTHO05D009706 1.1e-146 524.2 333 73.9
Dinv11708 Davidia involucrata HOM05D007497 ORTHO05D009706 2.6e-145 519.6 320 77.5
Actinidia30617 Actinidia chinensis HOM05D007497 ORTHO05D009706 1.1e-138 497.7 373 68.9
Solyc01g009940.1 Solanum lycopersicum HOM05D007497 ORTHO05D009706 3.9e-117 426.0 280 71.8
Potri.001G060300 Populus trichocarpa HOM05D007497 ORTHO05D009706 1.2e-97 361.3 223 79.4
Haze_12459 Corylus avellana HOM05D007497 ORTHO05D009706 2.9e-67 260.4 167 77.2
Pp3s30_430 Physcomitrium patens HOM05D007497 ORTHO05D009706 5.4e-66 256.1 447 33.8
HanXRQChr12g0362241 Helianthus annuus HOM05D007497 ORTHO05D009706 8.1e-62 242.3 156 74.4
MD10G1063400 Malus domestica HOM05D007497 ORTHO05D009706 1.1e-53 215.3 236 52.1
Prupe.4G226800 Prunus persica HOM05D007497 ORTHO05D009706 1.9e-50 204.5 159 65.4
SalBow2G3560 Salvia bowleyana HOM05D007497 ORTHO05D009706 4.2e-42 176.8 117 70.9
Cre16.g679150 Chlamydomonas reinhardtii HOM05D007497 ORTHO05D009706 1.9e-26 124.8 419 27.0
HPP92_024456 Vanilla planifolia HOM05D007497 ORTHO05D009706 2.8e-22 110.9 77 67.5
Cfa026587 Carpinus fangiana HOM05D007497 ORTHO05D022249 2.1e-17 94.7 338 26.6
SEGI_36642 Sequoiadendron giganteum HOM05D007497 ORTHO05D022249 7.9e-17 92.8 395 24.3
MD13G1123400 Malus domestica HOM05D007497 ORTHO05D009706 1.8e-16 91.7 57 77.2
arahy.Tifrunner.gnm1.ann1.X4TTMB Arachis hypogaea HOM05D007497 ORTHO05D015410 2.2e-11 74.7 51 70.6
PRCOL_00006895 Prasinoderma coloniale HOM05D007497 ORTHO05D009706 3.7e-06 57.4 181 29.8


User provided reference genes

Program Settings