Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr21g0306971 Lupinus albus HOM05D002826 ORTHO05D003105 2.0e-49 198.7 97 100.0
Lalb_Chr06g0163761 Lupinus albus HOM05D002826 ORTHO05D003105 6.0e-22 107.5 52 94.2
Glyma.10G283900 Glycine max HOM05D002826 ORTHO05D003105 1.9e-20 102.4 51 92.2
Glyma.20G105800 Glycine max HOM05D002826 ORTHO05D003105 1.9e-20 102.4 51 92.2
Lj5g0014599 Lotus japonicus HOM05D002826 ORTHO05D003105 2.5e-20 102.1 48 95.8
Ca_03293_v3 Cicer arietinum L. HOM05D002826 ORTHO05D003105 1.6e-19 99.4 51 88.2
Medtr1g112990 Medicago truncatula HOM05D002826 ORTHO05D003105 8.2e-19 97.1 51 86.3
Sed0003034 Sechium edule HOM05D002826 ORTHO05D003105 8.2e-19 97.1 53 81.1
Psat3g175920 Pisum sativum HOM05D002826 ORTHO05D003105 1.8e-18 95.9 47 89.4
ClCG02G003880 Citrullus lanatus HOM05D002826 ORTHO05D003105 3.1e-18 95.1 53 79.2
MELO3C013330.2 Cucumis melo HOM05D002826 ORTHO05D003105 3.1e-18 95.1 53 79.2
CsaV3_7G001250 Cucumis sativus L. HOM05D002826 ORTHO05D003105 3.1e-18 95.1 53 79.2
Phvul.007G017400 Phaseolus vulgaris HOM05D002826 ORTHO05D003105 3.1e-18 95.1 51 90.2
TAR628G1706 Trochodendron aralioides HOM05D002826 ORTHO05D003105 3.1e-18 95.1 52 82.7
Actinidia17021 Actinidia chinensis HOM05D002826 ORTHO05D003105 4.0e-18 94.7 52 80.8
CSS0009204 Camellia sinensis var. sinensis HOM05D002826 ORTHO05D003105 5.3e-18 94.4 52 78.8
CANSAT25G1892 Cannabis sativa HOM05D002826 ORTHO05D003105 5.3e-18 94.4 52 82.7
CANSAT25G2885 Cannabis sativa HOM05D002826 ORTHO05D003105 5.3e-18 94.4 52 82.7
Rhsim06G0011300 Rhododendron simsii HOM05D002826 ORTHO05D003105 5.3e-18 94.4 52 78.8
SGA_v2.0_scaffold275G46539 Striga asiatica HOM05D002826 ORTHO05D003105 5.3e-18 94.4 52 80.8
Dinv31898 Davidia involucrata HOM05D002826 ORTHO05D003105 6.9e-18 94.0 52 80.8
MD10G1129200 Malus domestica HOM05D002826 ORTHO05D003105 6.9e-18 94.0 53 79.2
CDE05G2980 Ceratophyllum demersum HOM05D002826 ORTHO05D003105 9.0e-18 93.6 53 77.4
FAN15G0661 Fragaria x ananassa HOM05D002826 ORTHO05D003105 9.0e-18 93.6 53 77.4
FAN20G0297 Fragaria x ananassa HOM05D002236 ORTHO05D002341 9.0e-18 93.6 53 77.4
FAN27G0593 Fragaria x ananassa HOM05D002826 ORTHO05D003105 9.0e-18 93.6 53 77.4
TPR.G2417 Trifolium pratense HOM05D002826 ORTHO05D003105 9.0e-18 93.6 52 84.6
VMungo0720G1494 Vigna mungo HOM05D002826 ORTHO05D003105 9.0e-18 93.6 42 100.0
Cc10_g01070 Coffea canephora HOM05D002826 ORTHO05D003105 1.5e-17 92.8 49 83.7
Migut.N03189 Erythranthe guttata HOM05D002826 ORTHO05D003105 1.5e-17 92.8 52 76.9
FvH4_2g15740 Fragaria vesca HOM05D002826 ORTHO05D003105 1.5e-17 92.8 53 77.4
FAN24G2039 Fragaria x ananassa HOM05D002826 ORTHO05D003105 1.5e-17 92.8 53 77.4
HanXRQChr06g0184841 Helianthus annuus HOM05D002826 ORTHO05D003105 2.0e-17 92.4 50 82.0
Nitab4.5_0003030g0020 Nicotiana tabacum HOM05D002826 ORTHO05D003105 2.0e-17 92.4 52 78.8
Solyc04g082020.3 Solanum lycopersicum HOM05D002826 ORTHO05D003105 2.0e-17 92.4 52 78.8
Sopen04g035670 Solanum pennellii HOM05D002826 ORTHO05D003105 2.0e-17 92.4 52 78.8
SGA_v2.0_scaffold145G36105 Striga asiatica HOM05D002826 ORTHO05D003105 2.0e-17 92.4 52 76.9
CAN.G311.81 Capsicum annuum HOM05D002826 ORTHO05D003105 2.6e-17 92.0 52 78.8
Peaxi162Scf00174g01015 Petunia axillaris HOM05D002826 ORTHO05D003105 2.6e-17 92.0 52 78.8
QL02p013021 Quercus lobata HOM05D002826 ORTHO05D003105 2.6e-17 92.0 49 83.7
RcHm_v2.0_Chr6g0279051 Rosa chinensis HOM05D002826 ORTHO05D003105 2.6e-17 92.0 53 75.5
Sc18g0006230 Simmondsia chinensis HOM05D002826 ORTHO05D003105 2.6e-17 92.0 53 77.4
PGSC0003DMG400009958 Solanum tuberosum HOM05D002826 ORTHO05D003105 2.6e-17 92.0 52 78.8
vmacro21847 Vaccinium macrocarpon HOM05D002826 ORTHO05D003105 2.6e-17 92.0 52 76.9
Nn6g31897 Nelumbo nucifera HOM05D002826 ORTHO05D003105 3.4e-17 91.7 52 78.8
Hma1.2p1_3012F.1_g331620 Hydrangea macrophylla HOM05D002826 ORTHO05D003105 4.5e-17 91.3 52 78.8
Prupe.8G169800 Prunus persica HOM05D002826 ORTHO05D003105 4.5e-17 91.3 53 77.4
SalBow6G2958 Salvia bowleyana HOM05D002826 ORTHO05D003105 4.5e-17 91.3 53 75.5
CSS0023064 Camellia sinensis var. sinensis HOM05D002826 ORTHO05D003105 5.8e-17 90.9 52 76.9
Dinv39561 Davidia involucrata HOM05D002826 ORTHO05D003105 5.8e-17 90.9 52 78.8
Nn1g01623 Nelumbo nucifera HOM05D002826 ORTHO05D003105 5.8e-17 90.9 52 76.9
PSO541G5721 Papaver somniferum HOM05D002826 ORTHO05D003105 5.8e-17 90.9 52 82.7
PSO675G0007 Papaver somniferum HOM05D002826 ORTHO05D003105 5.8e-17 90.9 52 82.7
THA.LOC104813220 Tarenaya hassleriana HOM05D002826 ORTHO05D003105 5.8e-17 90.9 52 76.9
Haze_02092 Corylus avellana HOM05D002826 ORTHO05D003105 7.6e-17 90.5 48 85.4
DCAR_013893 Daucus carota HOM05D002826 ORTHO05D003105 7.6e-17 90.5 52 76.9
Eucgr.F03705 Eucalyptus grandis HOM05D002826 ORTHO05D003105 7.6e-17 90.5 53 75.5
CiPaw.05G085900 Carya illinoinensis HOM05D002826 ORTHO05D003105 1.0e-16 90.1 53 75.5
AUR62010005 Chenopodium quinoa HOM05D002826 ORTHO05D003105 1.0e-16 90.1 48 83.3
AUR62012994 Chenopodium quinoa HOM05D002826 ORTHO05D003105 1.0e-16 90.1 48 83.3
Thecc.08G052500 Theobroma cacao HOM05D002826 ORTHO05D003105 1.0e-16 90.1 52 75.0
TAR381G1567 Trochodendron aralioides HOM05D002826 ORTHO05D003105 1.0e-16 90.1 52 78.8
GSVIVG01008732001 Vitis vinifera HOM05D002826 ORTHO05D003105 1.0e-16 90.1 52 76.9
Ah.01g023310 Amaranthus hybridus HOM05D002826 ORTHO05D003105 1.3e-16 89.7 48 83.3
COL.COLO4_26077 Corchorus olitorius HOM05D002826 ORTHO05D003105 1.3e-16 89.7 52 75.0
Lj4A802T110 Lonicera japonica HOM05D002826 ORTHO05D003105 1.3e-16 89.7 52 76.9
SalBow7G0593 Salvia bowleyana HOM05D002826 ORTHO05D003105 1.3e-16 89.7 52 76.9
EL10Ac9g21332 Beta vulgaris HOM05D002826 ORTHO05D003105 1.7e-16 89.4 48 83.3
Aqoxy6G01935 Aquilegia oxysepala HOM05D002826 ORTHO05D003105 2.2e-16 89.0 49 81.6
Ciclev10002475m.g Citrus clementina HOM05D002826 ORTHO05D003105 2.2e-16 89.0 52 75.0
Gohir.A01G108700 Gossypium hirsutum HOM05D002826 ORTHO05D003105 2.2e-16 89.0 50 78.0
Gohir.D01G095300 Gossypium hirsutum HOM05D002826 ORTHO05D003105 2.2e-16 89.0 50 78.0
Gorai.002G120700 Gossypium raimondii HOM05D002826 ORTHO05D003105 2.2e-16 89.0 50 78.0
MBI08_g05716_MAGBIO Magnolia biondii HOM05D002826 ORTHO05D003105 2.2e-16 89.0 52 76.9
MD05G1126400 Malus domestica HOM05D002826 ORTHO05D003105 2.2e-16 89.0 41 95.1
Sed0001204 Sechium edule HOM05D002826 ORTHO05D003105 2.2e-16 89.0 47 85.1
Cpa.g.sc26.255 Carica papaya HOM05D002826 ORTHO05D003105 2.9e-16 88.6 52 75.0
CiPaw.08G069700 Carya illinoinensis HOM05D002826 ORTHO05D003105 2.9e-16 88.6 52 76.9
Haze_22718 Corylus avellana HOM05D002826 ORTHO05D003105 2.9e-16 88.6 52 76.9
Zm00001eb228290 Zea mays HOM05D002826 ORTHO05D003105 2.9e-16 88.6 54 75.9
Zm00001eb272170 Zea mays HOM05D002826 ORTHO05D003105 2.9e-16 88.6 54 75.9
Duzib116G0507 Durio zibethinus HOM05D002826 ORTHO05D003105 3.8e-16 88.2 52 73.1
HanXRQChr11g0322251 Helianthus annuus HOM05D002826 ORTHO05D003105 3.8e-16 88.2 57 73.7
Manes.05G141900 Manihot esculenta HOM05D002826 ORTHO05D003105 3.8e-16 88.2 52 75.0
Carub.0006s2525 Capsella rubella HOM05D002826 ORTHO05D003105 4.9e-16 87.8 52 75.0
Duzib093G1699 Durio zibethinus HOM05D002826 ORTHO05D003105 4.9e-16 87.8 52 73.1
TWI56G0331 Tripterygium wilfordii HOM05D002826 ORTHO05D003105 4.9e-16 87.8 52 73.1
Cfa005295 Carpinus fangiana HOM05D002826 ORTHO05D003105 6.5e-16 87.4 45 86.7
Atru.chr13.209 Acer truncatum HOM05D002826 ORTHO05D003105 8.4e-16 87.0 52 75.0
Aa31LG9G12360 Aethionema arabicum HOM05D002826 ORTHO05D003105 8.4e-16 87.0 52 75.0
BcaC03g16466 Brassica carinata HOM05D002826 ORTHO05D003105 8.4e-16 87.0 52 78.8
C02p42780 Brassica napus HOM05D002826 ORTHO05D003105 8.4e-16 87.0 52 78.8
BolC2t10314H Brassica oleracea HOM05D002826 ORTHO05D003105 8.4e-16 87.0 52 78.8
ECA232G0330 Erigeron canadensis HOM05D002826 ORTHO05D003105 8.4e-16 87.0 49 79.6
QL11p052502 Quercus lobata HOM05D002826 ORTHO05D003105 1.1e-15 86.7 53 73.6
Lsat_1_v5_gn_2_6900 Lactuca sativa HOM05D002826 ORTHO05D003105 1.9e-15 85.9 51 76.5
Potri.005G246200 Populus trichocarpa HOM05D002826 ORTHO05D003105 1.9e-15 85.9 52 73.1
Oeu041361.1 Olea europaea HOM05D002826 ORTHO05D003105 2.5e-15 85.5 52 76.9
Potri.002G015900 Populus trichocarpa HOM05D002826 ORTHO05D003105 2.5e-15 85.5 53 75.5
Hund06451 Selenicereus undatus HOM05D002826 ORTHO05D003105 2.5e-15 85.5 48 79.2
Thhalv10027929m.g Eutrema salsugineum HOM05D002826 ORTHO05D003105 3.2e-15 85.1 52 75.0
PGR142G1133 Punica granatum HOM05D002826 ORTHO05D003105 3.2e-15 85.1 52 80.8
Sabra02G0012700 Salix brachista HOM05D002826 ORTHO05D003105 3.2e-15 85.1 53 75.5
AL6G39820 Arabidopsis lyrata HOM05D002826 ORTHO05D003105 4.2e-15 84.7 52 75.0
Eucgr.I01459 Eucalyptus grandis HOM05D002826 ORTHO05D003105 4.2e-15 84.7 52 76.9
ATR0661G310 Amborella trichopoda HOM05D002826 ORTHO05D003105 5.5e-15 84.3 49 75.5
Sabra05G0190300 Salix brachista HOM05D002826 ORTHO05D003105 7.1e-15 84.0 52 73.1
AT5G27280 Arabidopsis thaliana HOM05D002826 ORTHO05D003105 9.3e-15 83.6 40 90.0
CARHR185890 Cardamine hirsuta HOM05D002826 ORTHO05D003105 1.6e-14 82.8 52 75.0
HPP92_014544 Vanilla planifolia HOM05D002236 ORTHO05D002341 2.1e-14 82.4 40 90.0
Os06g0724400 Oryza sativa ssp. japonica HOM05D002826 ORTHO05D003105 4.6e-14 81.3 40 87.5
unitig_744.g24605 Utricularia gibba HOM05D002826 ORTHO05D003105 6.0e-14 80.9 52 69.2
Sp7g08460 Schrenkiella parvula HOM05D002826 ORTHO05D003105 7.9e-14 80.5 40 87.5
SEGI_27970 Sequoiadendron giganteum HOM05D002826 ORTHO05D003105 2.3e-13 79.0 43 81.4
Zm00001eb240610 Zea mays HOM05D002826 ORTHO05D003105 3.3e-12 75.1 60 58.3
CDE05G2693 Ceratophyllum demersum HOM05D002826 ORTHO05D003105 4.3e-12 74.7 58 60.3
AagrBONN_evm.TU.Sc2ySwM_362.1913 Anthoceros agrestis HOM05D002826 ORTHO05D003105 4.5e-09 64.7 35 77.1
SMO170G0032 Selaginella moellendorffii HOM05D002826 ORTHO05D003105 7.6e-09 63.9 35 77.1
Hma1.2p1_2322F.1_g319860 Hydrangea macrophylla HOM05D002826 ORTHO05D003105 2.9e-08 62.0 39 71.8
Pp3c5_3740 Physcomitrium patens HOM05D002826 ORTHO05D003105 2.9e-08 62.0 36 72.2
Mapoly0030s0011 Marchantia polymorpha HOM05D002826 ORTHO05D003105 6.5e-08 60.8 39 69.2
CBR_g45372 Chara braunii HOM05D002826 ORTHO05D003105 1.1e-07 60.1 35 71.4
arahy.Tifrunner.gnm1.ann1.DU76ZX Arachis hypogaea HOM05D002826 ORTHO05D003105 4.6e-06 54.7 29 86.2
arahy.Tifrunner.gnm1.ann1.9X5JNZ Arachis hypogaea HOM05D002826 ORTHO05D003105 7.9e-06 53.9 26 92.3


User provided reference genes

Program Settings