Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr21g0306401 Lupinus albus HOM05D004016 ORTHO05D004732 1.6e-103 379.4 194 100.0
Lalb_Chr06g0162891 Lupinus albus HOM05D004016 ORTHO05D004732 2.1e-82 309.3 195 83.1
Lalb_Chr02g0142631 Lupinus albus HOM05D004016 ORTHO05D004732 7.9e-82 307.4 194 82.0
Ca_09744_v3 Cicer arietinum L. HOM05D004016 ORTHO05D004732 9.1e-62 240.7 200 69.5
Phvul.007G173300 Phaseolus vulgaris HOM05D004016 ORTHO05D004732 6.1e-58 228.0 201 68.2
Glyma.02G146200 Glycine max HOM05D004016 ORTHO05D004732 4.0e-57 225.3 207 68.6
Lj5g0005099 Lotus japonicus HOM05D004016 ORTHO05D004732 5.7e-56 221.5 205 65.9
Glyma.10G027800 Glycine max HOM05D004016 ORTHO05D004732 1.4e-54 216.9 210 67.6
RcHm_v2.0_Chr6g0290651 Rosa chinensis HOM05D004016 ORTHO05D004732 1.8e-54 216.5 226 58.0
Ca_08613_v3 Cicer arietinum L. HOM05D004016 ORTHO05D004732 3.1e-54 215.7 203 60.1
FAN15G1959 Fragaria x ananassa HOM05D004016 ORTHO05D004732 9.2e-54 214.2 209 63.2
Prupe.8G238400 Prunus persica HOM05D004016 ORTHO05D004732 1.6e-53 213.4 216 58.3
FAN27G2694 Fragaria x ananassa HOM05D004016 ORTHO05D004732 1.3e-52 210.3 209 62.2
FAN20G3152 Fragaria x ananassa HOM05D004016 ORTHO05D004732 2.9e-52 209.1 217 59.9
Haze_04687 Corylus avellana HOM05D004016 ORTHO05D004732 1.5e-51 206.8 211 62.1
VMungo0720G0880 Vigna mungo HOM05D004016 ORTHO05D004732 1.5e-51 206.8 187 66.3
Cfa006163 Carpinus fangiana HOM05D004016 ORTHO05D004732 3.3e-51 205.7 211 61.6
Hma1.2p1_0667F.1_g199710 Hydrangea macrophylla HOM05D004016 ORTHO05D004732 3.3e-51 205.7 214 56.5
arahy.Tifrunner.gnm1.ann1.256EAD Arachis hypogaea HOM05D004016 ORTHO05D004732 1.2e-50 203.8 214 60.7
FAN24G3262 Fragaria x ananassa HOM05D004016 ORTHO05D004732 1.6e-50 203.4 217 59.0
FvH4_2g23281 Fragaria vesca HOM05D004016 ORTHO05D004732 2.1e-50 203.0 212 59.9
Cpa.g.sc487.4 Carica papaya HOM05D004016 ORTHO05D004732 2.8e-50 202.6 219 56.2
Manes.05G079900 Manihot esculenta HOM05D004016 ORTHO05D004732 1.0e-49 200.7 220 56.8
MD03G1262100 Malus domestica HOM05D004016 ORTHO05D004732 2.0e-48 196.4 214 56.1
Glyma.03G155700 Glycine max HOM05D004016 ORTHO05D004732 2.6e-48 196.1 200 60.5
Psat3g063280 Pisum sativum HOM05D004016 ORTHO05D004732 2.6e-48 196.1 203 58.6
Dinv32914 Davidia involucrata HOM05D004016 ORTHO05D004732 4.4e-48 195.3 212 58.5
MD11G1282800 Malus domestica HOM05D004016 ORTHO05D004732 9.8e-48 194.1 219 54.8
Potri.005G211400 Populus trichocarpa HOM05D004016 ORTHO05D004732 9.8e-48 194.1 221 54.3
Phvul.001G153100 Phaseolus vulgaris HOM05D004016 ORTHO05D004732 2.9e-47 192.6 200 59.5
TPR.G27140 Trifolium pratense HOM05D004016 ORTHO05D004732 2.9e-47 192.6 200 59.5
Manes.01G206100 Manihot esculenta HOM05D004016 ORTHO05D004732 6.4e-47 191.4 220 55.0
ClCG07G000350 Citrullus lanatus HOM05D004016 ORTHO05D004732 8.3e-47 191.0 211 58.3
COL.COLO4_09066 Corchorus olitorius HOM05D004016 ORTHO05D004732 1.1e-46 190.7 214 55.6
Potri.002G050900 Populus trichocarpa HOM05D004016 ORTHO05D004732 1.4e-46 190.3 223 53.4
Hma1.2p1_0822F.1_g224340 Hydrangea macrophylla HOM05D004016 ORTHO05D004732 3.2e-46 189.1 211 53.6
Psat6g059840 Pisum sativum HOM05D004016 ORTHO05D004732 3.2e-46 189.1 188 61.2
VMungo1383G1854 Vigna mungo HOM05D004016 ORTHO05D004732 3.2e-46 189.1 201 59.7
Ciclev10022155m.g Citrus clementina HOM05D004016 ORTHO05D004732 4.1e-46 188.7 221 53.4
Glyma.19G157800 Glycine max HOM05D004016 ORTHO05D004732 9.2e-46 187.6 199 58.3
Atru.chr5.1471 Acer truncatum HOM05D004016 ORTHO05D004732 1.2e-45 187.2 225 55.6
CsaV3_6G037200 Cucumis sativus L. HOM05D004016 ORTHO05D004732 1.2e-45 187.2 209 56.5
Medtr7g095160 Medicago truncatula HOM05D004016 ORTHO05D004732 1.6e-45 186.8 204 57.4
Cc01_g19290 Coffea canephora HOM05D004016 ORTHO05D004732 2.0e-45 186.4 222 53.2
Thecc.01G275600 Theobroma cacao HOM05D004016 ORTHO05D004732 3.5e-45 185.7 222 54.1
Ah.02g110900 Amaranthus hybridus HOM05D004016 ORTHO05D004732 1.0e-44 184.1 209 55.5
Rhsim01G0273500 Rhododendron simsii HOM05D004016 ORTHO05D004732 1.3e-44 183.7 204 54.9
MELO3C014394.2 Cucumis melo HOM05D004016 ORTHO05D004732 1.7e-44 183.3 209 55.5
Lj2E1169T0 Lonicera japonica HOM05D004016 ORTHO05D004732 1.7e-44 183.3 215 56.3
TAR636G0684 Trochodendron aralioides HOM05D004016 ORTHO05D004732 1.7e-44 183.3 203 54.2
Sc05g0001440 Simmondsia chinensis HOM05D004016 ORTHO05D004732 2.3e-44 183.0 201 55.7
Actinidia21126 Actinidia chinensis HOM05D004016 ORTHO05D004732 3.0e-44 182.6 208 52.9
Gohir.A08G065500 Gossypium hirsutum HOM05D004016 ORTHO05D004732 3.0e-44 182.6 217 53.9
vmacro14911 Vaccinium macrocarpon HOM05D004016 ORTHO05D004732 3.9e-44 182.2 204 53.9
Duzib133G1129 Durio zibethinus HOM05D004016 ORTHO05D004732 8.6e-44 181.0 214 53.3
Sabra02G0041700 Salix brachista HOM05D004016 ORTHO05D004732 8.6e-44 181.0 222 51.8
Sabra05G0161500 Salix brachista HOM05D004016 ORTHO05D004732 1.1e-43 180.6 217 52.1
EL10Ac5g10544 Beta vulgaris HOM05D004016 ORTHO05D004732 1.9e-43 179.9 209 52.6
Lj1g0004863 Lotus japonicus HOM05D004016 ORTHO05D004732 3.3e-43 179.1 210 54.8
LjContig00056g0010505 Lotus japonicus HOM05D004016 ORTHO05D004732 3.3e-43 179.1 210 54.8
Gorai.004G078400 Gossypium raimondii HOM05D004016 ORTHO05D004732 7.3e-43 177.9 217 52.5
Gohir.D08G074000 Gossypium hirsutum HOM05D004016 ORTHO05D004732 9.5e-43 177.6 217 52.5
TAR633G2817 Trochodendron aralioides HOM05D004016 ORTHO05D004732 1.2e-42 177.2 206 54.9
Sed0007164 Sechium edule HOM05D004016 ORTHO05D004732 8.0e-42 174.5 214 54.2
TWI18G0383 Tripterygium wilfordii HOM05D004016 ORTHO05D004732 1.4e-41 173.7 214 53.3
Nitab4.5_0002928g0010 Nicotiana tabacum HOM05D004016 ORTHO05D004732 1.8e-41 173.3 195 55.4
Lsat_1_v5_gn_8_56660 Lactuca sativa HOM05D004016 ORTHO05D004732 2.3e-41 172.9 222 49.5
Duzib138G0182 Durio zibethinus HOM05D004016 ORTHO05D004732 3.1e-41 172.6 220 51.8
MSTRG.18246 Avicennia marina HOM05D004016 ORTHO05D004732 1.2e-40 170.6 213 51.6
TPR.G24294 Trifolium pratense HOM05D004016 ORTHO05D004732 2.0e-40 169.9 212 51.9
TWI12G1445 Tripterygium wilfordii HOM05D004016 ORTHO05D004732 2.0e-40 169.9 209 53.6
Eucgr.H01463 Eucalyptus grandis HOM05D004016 ORTHO05D004732 1.3e-39 167.2 208 51.0
HanXRQChr04g0118991 Helianthus annuus HOM05D004016 ORTHO05D004732 1.3e-39 167.2 219 49.8
Lj1C48T4 Lonicera japonica HOM05D004016 ORTHO05D004732 1.3e-39 167.2 206 53.9
CiPaw.08G107200 Carya illinoinensis HOM05D004016 ORTHO05D004732 8.3e-39 164.5 198 51.5
AUR62028601 Chenopodium quinoa HOM05D004016 ORTHO05D004732 1.1e-38 164.1 210 51.9
Sopen09g027150 Solanum pennellii HOM05D004016 ORTHO05D004732 1.4e-38 163.7 219 49.8
Solyc09g065380.2 Solanum lycopersicum HOM05D004016 ORTHO05D004732 1.9e-38 163.3 219 49.8
PGR044G0005 Punica granatum HOM05D004016 ORTHO05D004732 2.4e-38 162.9 209 50.7
MSTRG.21548 Avicennia marina HOM05D004016 ORTHO05D004732 3.2e-38 162.5 213 50.7
Aa31LG5G2350 Aethionema arabicum HOM05D004016 ORTHO05D004732 2.0e-37 159.8 209 48.3
Gohir.D08G204600 Gossypium hirsutum HOM05D004016 ORTHO05D004732 2.0e-37 159.8 203 50.7
Gorai.004G216600 Gossypium raimondii HOM05D004016 ORTHO05D004732 3.5e-37 159.1 200 50.5
THA.LOC104801244 Tarenaya hassleriana HOM05D004016 ORTHO05D004732 4.6e-37 158.7 212 49.5
PGSC0003DMG400019358 Solanum tuberosum HOM05D004016 ORTHO05D004732 6.0e-37 158.3 219 48.4
Gohir.A08G186500 Gossypium hirsutum HOM05D004016 ORTHO05D004732 2.3e-36 156.4 202 51.0
Migut.D00318 Erythranthe guttata HOM05D004016 ORTHO05D004732 3.0e-36 156.0 211 50.7
Medtr1g071810 Medicago truncatula HOM05D004016 ORTHO05D004732 3.9e-36 155.6 294 40.1
Gohir.A11G124100 Gossypium hirsutum HOM05D004016 ORTHO05D004732 6.6e-36 154.8 209 47.8
Hund02825 Selenicereus undatus HOM05D004016 ORTHO05D004732 6.6e-36 154.8 216 48.1
Migut.N02038 Erythranthe guttata HOM05D004016 ORTHO05D004732 1.1e-35 154.1 211 50.2
Hund27940 Selenicereus undatus HOM05D004016 ORTHO05D004732 3.3e-35 152.5 214 47.2
Oeu025739.1 Olea europaea HOM05D004016 ORTHO05D004732 4.3e-35 152.1 211 50.2
THA.LOC104825992 Tarenaya hassleriana HOM05D004016 ORTHO05D004732 4.3e-35 152.1 218 47.7
DCAR_002723 Daucus carota HOM05D004016 ORTHO05D004732 7.3e-35 151.4 222 45.5
Gorai.007G138300 Gossypium raimondii HOM05D004016 ORTHO05D004732 1.2e-34 150.6 209 47.4
Sc17g0001350 Simmondsia chinensis HOM05D004016 ORTHO05D004732 1.2e-34 150.6 198 50.0
CARHR251020 Cardamine hirsuta HOM05D004016 ORTHO05D004732 1.6e-34 150.2 208 46.2
BcaB05g23659 Brassica carinata HOM05D004016 ORTHO05D004732 2.8e-34 149.4 202 48.5
Oeu028065.1 Olea europaea HOM05D004016 ORTHO05D004732 2.8e-34 149.4 224 46.4
Thhalv10028968m.g Eutrema salsugineum HOM05D004016 ORTHO05D004732 3.6e-34 149.1 210 47.1
Nitab4.5_0005172g0030 Nicotiana tabacum HOM05D004016 ORTHO05D004732 3.6e-34 149.1 205 49.3
AT4G02715 Arabidopsis thaliana HOM05D004016 ORTHO05D004732 1.1e-33 147.5 206 46.6
Nitab4.5_0009529g0030 Nicotiana tabacum HOM05D004016 ORTHO05D004732 1.1e-33 147.5 169 52.1
Sp6g02620 Schrenkiella parvula HOM05D004016 ORTHO05D004732 1.8e-33 146.7 216 47.2
Nitab4.5_0008064g0020 Nicotiana tabacum HOM05D004016 ORTHO05D004732 2.3e-33 146.4 203 48.8
Oeu040656.1 Olea europaea HOM05D004016 ORTHO05D004732 2.3e-33 146.4 213 48.8
Psat1g067520 Pisum sativum HOM05D004016 ORTHO05D004732 2.3e-33 146.4 175 54.9
BcaB01g02015 Brassica carinata HOM05D004016 ORTHO05D004732 3.1e-33 146.0 199 48.7
CAN.G1549.22 Capsicum annuum HOM05D004016 ORTHO05D004732 3.1e-33 146.0 217 45.2
DCAR_018429 Daucus carota HOM05D004016 ORTHO05D004732 3.1e-33 146.0 243 42.8
AL6G50300 Arabidopsis lyrata HOM05D004016 ORTHO05D004732 6.8e-33 144.8 212 45.8
ClCG09G007200 Citrullus lanatus HOM05D004016 ORTHO05D004732 1.2e-32 144.1 205 48.8
Peaxi162Scf01248g00010 Petunia axillaris HOM05D004016 ORTHO05D004732 1.2e-32 144.1 199 51.3
vmacro02591 Vaccinium macrocarpon HOM05D004016 ORTHO05D004732 1.5e-32 143.7 214 46.7
QL12p021105 Quercus lobata HOM05D004016 ORTHO05D004732 2.0e-32 143.3 229 45.0
MSTRG.17454 Avicennia marina HOM05D004016 ORTHO05D004732 2.6e-32 142.9 206 47.6
Aqoxy2G03410 Aquilegia oxysepala HOM05D004016 ORTHO05D004732 3.4e-32 142.5 189 50.8
CAN.G1549.21 Capsicum annuum HOM05D004016 ORTHO05D004732 3.4e-32 142.5 217 44.7
Aqoxy5G00450 Aquilegia oxysepala HOM05D004016 ORTHO05D004732 4.4e-32 142.1 213 48.4
CAN.G1549.11 Capsicum annuum HOM05D004016 ORTHO05D004732 4.4e-32 142.1 217 43.3
Gohir.D11G129300 Gossypium hirsutum HOM05D004016 ORTHO05D004732 5.8e-32 141.7 209 45.0
Carub.0006s3440 Capsella rubella HOM05D004016 ORTHO05D004732 1.7e-31 140.2 208 45.7
ECA236G1435 Erigeron canadensis HOM05D004016 ORTHO05D004732 1.7e-31 140.2 206 46.6
Rhsim13G0026600 Rhododendron simsii HOM05D004016 ORTHO05D004732 2.9e-31 139.4 211 45.0
Peaxi162Scf00783g00017 Petunia axillaris HOM05D004016 ORTHO05D004732 1.4e-30 137.1 223 43.5
Sopen06g035580 Solanum pennellii HOM05D004016 ORTHO05D004732 3.2e-30 136.0 216 43.5
Solyc06g084200.2 Solanum lycopersicum HOM05D004016 ORTHO05D004732 1.6e-29 133.7 215 43.3
Actinidia24906 Actinidia chinensis HOM05D004016 ORTHO05D004732 2.1e-29 133.3 212 43.4
CsaV3_7G027970 Cucumis sativus L. HOM05D004016 ORTHO05D004732 3.0e-28 129.4 202 46.5
PGSC0003DMG400020056 Solanum tuberosum HOM05D004016 ORTHO05D004732 3.0e-28 129.4 216 43.5
BcaC03g16166 Brassica carinata HOM05D004016 ORTHO05D004732 1.1e-27 127.5 190 46.3
MELO3C015815.2 Cucumis melo HOM05D004016 ORTHO05D004732 1.9e-27 126.7 202 47.0
C02p39140 Brassica napus HOM05D004016 ORTHO05D004732 2.5e-27 126.3 190 46.3
PSO761G0274 Papaver somniferum HOM05D004016 ORTHO05D004732 7.3e-27 124.8 218 44.5
SGA_v2.0_scaffold138G35322 Striga asiatica HOM05D004016 ORTHO05D004732 7.3e-27 124.8 171 49.7
BcaC04g24008 Brassica carinata HOM05D004016 ORTHO05D004732 2.8e-26 122.9 198 44.9
C09p02200 Brassica napus HOM05D004016 ORTHO05D004732 2.8e-26 122.9 196 44.4
BolC9t53149H Brassica oleracea HOM05D004016 ORTHO05D004732 2.8e-26 122.9 198 44.9
SGA_v2.0_scaffold1G00497 Striga asiatica HOM05D004016 ORTHO05D004732 5.2e-25 118.6 184 45.1
BolC2t09924H Brassica oleracea HOM05D004016 ORTHO05D004732 1.5e-24 117.1 183 45.4
HPP92_013967 Vanilla planifolia HOM05D004016 ORTHO05D004732 3.4e-24 115.9 198 43.4
A09p02110 Brassica napus HOM05D004016 ORTHO05D004732 4.9e-23 112.1 208 40.4
BraA09t35860Z Brassica rapa HOM05D004016 ORTHO05D004732 4.9e-23 112.1 208 40.4
PSO210G5515 Papaver somniferum HOM05D004016 ORTHO05D004732 6.4e-23 111.7 218 40.8
ATR0697G155 Amborella trichopoda HOM05D004016 ORTHO05D004732 5.1e-20 102.1 149 47.7
VMungo1383G2032 Vigna mungo HOM05D004016 ORTHO05D004732 8.6e-20 101.3 99 60.6
unitig_0.g129 Utricularia gibba HOM05D004016 ORTHO05D004732 1.1e-17 94.4 146 42.5
ECA247G1708 Erigeron canadensis HOM05D004016 ORTHO05D004732 4.0e-17 92.4 194 37.1
Sed0001131 Sechium edule HOM05D004016 ORTHO05D004732 5.2e-17 92.0 209 39.7
Zm00001eb403300 Zea mays HOM05D004016 ORTHO05D004732 5.2e-17 92.0 208 36.5
BraA02t07483Z Brassica rapa HOM05D004016 ORTHO05D004732 6.9e-17 91.7 184 41.8
Os03g0160200 Oryza sativa ssp. japonica HOM05D004016 ORTHO05D004732 1.5e-16 90.5 205 40.0
Oeu013891.1 Olea europaea HOM05D004016 ORTHO05D004732 2.0e-16 90.1 169 42.0
A02p24930 Brassica napus HOM05D004016 ORTHO05D004732 3.4e-16 89.4 184 41.3
Oeu034146.1 Olea europaea HOM05D004016 ORTHO05D004732 7.6e-16 88.2 168 40.5
Gorai.009G456000 Gossypium raimondii HOM05D004016 ORTHO05D004732 2.2e-15 86.7 131 45.0
A03p30890 Brassica napus HOM05D004016 ORTHO05D004732 1.1e-14 84.3 89 59.6
Zm00001eb047890 Zea mays HOM05D004016 ORTHO05D004732 1.4e-14 84.0 152 40.8
VMungo0540G2292 Vigna mungo HOM05D004016 ORTHO05D004732 1.6e-13 80.5 83 55.4
SEGI_39625 Sequoiadendron giganteum HOM05D004016 ORTHO05D004732 3.9e-12 75.9 112 46.4
GSVIVG01001172001 Vitis vinifera HOM05D004016 ORTHO05D004732 1.6e-10 70.5 128 39.1
BcaC01g06736 Brassica carinata HOM05D002144 ORTHO05D002170 1.8e-09 67.0 83 54.2
BcaC01g06738 Brassica carinata HOM05D004016 ORTHO05D004732 3.1e-09 66.2 41 73.2
Nn4g22231 Nelumbo nucifera HOM05D004016 ORTHO05D004732 1.5e-08 63.9 56 66.1
SMO134G0037 Selaginella moellendorffii HOM05D004016 ORTHO05D004732 7.1e-06 55.1 111 43.2


User provided reference genes

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