Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr21g0306081 Lupinus albus HOM05D002510 ORTHO05D007210 8.2e-191 670.2 343 100.0
Lalb_Chr21g0306091 Lupinus albus HOM05D002510 ORTHO05D239273 2.5e-62 243.4 187 69.0
arahy.Tifrunner.gnm1.ann1.UF4UZA Arachis hypogaea HOM05D002510 ORTHO05D007210 4.6e-40 169.5 293 41.6
Sed0025740 Sechium edule HOM05D002510 ORTHO05D007210 1.0e-39 168.3 292 42.5
arahy.Tifrunner.gnm1.ann1.T8Z27G Arachis hypogaea HOM05D002510 ORTHO05D007210 1.3e-39 167.9 293 41.3
Manes.10G046400 Manihot esculenta HOM05D002510 ORTHO05D007210 1.7e-39 167.5 296 40.5
Dinv36438 Davidia involucrata HOM05D002510 ORTHO05D007210 6.6e-39 165.6 293 41.3
Thecc.10G074100 Theobroma cacao HOM05D002510 ORTHO05D007210 6.6e-39 165.6 290 41.7
Thhalv10024352m.g Eutrema salsugineum HOM05D002510 ORTHO05D007210 1.1e-38 164.9 294 41.2
Sp7g14310 Schrenkiella parvula HOM05D002510 ORTHO05D007210 1.5e-38 164.5 294 40.8
Carub.0006s1900 Capsella rubella HOM05D002510 ORTHO05D007210 1.9e-38 164.1 294 41.5
Lalb_Chr21g0306101 Lupinus albus HOM05D002510 ORTHO05D007210 2.5e-38 163.7 293 40.6
Atru.chr12.757 Acer truncatum HOM05D002510 ORTHO05D007210 4.3e-38 162.9 295 39.3
Atru.chr12.781 Acer truncatum HOM05D002510 ORTHO05D007210 4.3e-38 162.9 295 39.3
Psat6g183520 Pisum sativum HOM05D002510 ORTHO05D007210 4.3e-38 162.9 293 41.0
TAR633G1832 Trochodendron aralioides HOM05D002510 ORTHO05D007210 4.3e-38 162.9 293 40.3
ClCG05G021040 Citrullus lanatus HOM05D002510 ORTHO05D007210 7.3e-38 162.2 291 40.9
MELO3C012427.2 Cucumis melo HOM05D002510 ORTHO05D007210 7.3e-38 162.2 291 40.9
SGA_v2.0_scaffold51G18685 Striga asiatica HOM05D002510 ORTHO05D007210 7.3e-38 162.2 292 41.1
GSVIVG01016269001 Vitis vinifera HOM05D002510 ORTHO05D007210 7.3e-38 162.2 293 40.6
FAN01G2940 Fragaria x ananassa HOM05D002510 ORTHO05D007210 9.5e-38 161.8 270 41.9
Nn2g10809 Nelumbo nucifera HOM05D002510 ORTHO05D007210 9.5e-38 161.8 294 40.1
Ciclev10030651m.g Citrus clementina HOM05D002510 ORTHO05D007210 1.2e-37 161.4 293 41.0
CsaV3_5G036260 Cucumis sativus L. HOM05D002510 ORTHO05D007210 1.2e-37 161.4 291 40.9
HanXRQChr08g0218901 Helianthus annuus HOM05D002510 ORTHO05D007210 1.6e-37 161.0 305 39.0
AT5G20660 Arabidopsis thaliana HOM05D002510 ORTHO05D007210 2.1e-37 160.6 295 40.0
C01p27080 Brassica napus HOM05D002510 ORTHO05D007210 2.8e-37 160.2 294 39.8
BolC1t02655H Brassica oleracea HOM05D002510 ORTHO05D007210 2.8e-37 160.2 294 39.8
AL6G32210 Arabidopsis lyrata HOM05D002510 ORTHO05D007210 3.6e-37 159.8 295 39.7
BcaNung00246 Brassica carinata HOM05D002510 ORTHO05D007210 3.6e-37 159.8 293 40.3
CiPaw.01G272500 Carya illinoinensis HOM05D002510 ORTHO05D007210 3.6e-37 159.8 294 40.1
Cc02_g11330 Coffea canephora HOM05D002510 ORTHO05D007210 3.6e-37 159.8 293 40.6
Peaxi162Scf01719g00012 Petunia axillaris HOM05D002510 ORTHO05D007210 3.6e-37 159.8 289 40.1
CARHR290280 Cardamine hirsuta HOM05D002510 ORTHO05D007210 4.7e-37 159.5 294 40.1
Gohir.A13G021900 Gossypium hirsutum HOM05D002510 ORTHO05D007210 4.7e-37 159.5 293 39.6
A01p21720 Brassica napus HOM05D002510 ORTHO05D007210 8.1e-37 158.7 294 39.5
BraA01t02081Z Brassica rapa HOM05D002510 ORTHO05D007210 8.1e-37 158.7 294 39.5
Sopen04g011710 Solanum pennellii HOM05D002510 ORTHO05D007210 8.1e-37 158.7 301 39.5
Solyc04g025260.3 Solanum lycopersicum HOM05D002510 ORTHO05D007210 1.1e-36 158.3 301 39.2
TWI15G1196 Tripterygium wilfordii HOM05D002510 ORTHO05D007210 1.1e-36 158.3 294 39.1
SGA_v2.0_scaffold341G49348 Striga asiatica HOM05D002510 ORTHO05D007210 1.4e-36 157.9 312 38.8
MSTRG.8144 Avicennia marina HOM05D002510 ORTHO05D007210 1.8e-36 157.5 288 40.3
CAN.G656.24 Capsicum annuum HOM05D002510 ORTHO05D007210 1.8e-36 157.5 308 38.6
Gohir.D13G022500 Gossypium hirsutum HOM05D002510 ORTHO05D007210 1.8e-36 157.5 293 39.2
Gorai.013G025200 Gossypium raimondii HOM05D002510 ORTHO05D007210 1.8e-36 157.5 293 39.2
Phvul.007G094700 Phaseolus vulgaris HOM05D002510 ORTHO05D007210 1.8e-36 157.5 293 39.6
Potri.008G039400 Populus trichocarpa HOM05D002510 ORTHO05D007210 2.3e-36 157.1 297 39.7
TPR.G1937 Trifolium pratense HOM05D002510 ORTHO05D007210 2.3e-36 157.1 293 39.9
SalBow3G0762 Salvia bowleyana HOM05D002510 ORTHO05D007210 3.1e-36 156.8 306 38.6
CDE02G1489 Ceratophyllum demersum HOM05D002510 ORTHO05D007210 4.0e-36 156.4 293 39.2
Glyma.10G210900 Glycine max HOM05D002510 ORTHO05D007210 4.0e-36 156.4 293 38.9
Lj5g0022157 Lotus japonicus HOM05D002510 ORTHO05D007210 4.0e-36 156.4 287 39.7
Lj1C913G7 Lonicera japonica HOM05D002510 ORTHO05D007210 5.2e-36 156.0 298 38.9
PGR142G3054 Punica granatum HOM05D002510 ORTHO05D007210 6.8e-36 155.6 293 38.9
VMungo0720G2840 Vigna mungo HOM05D002510 ORTHO05D007210 1.2e-35 154.8 294 38.8
Cpa.g.sc53.84 Carica papaya HOM05D002510 ORTHO05D007210 2.0e-35 154.1 294 38.4
Medtr1g095040 Medicago truncatula HOM05D002510 ORTHO05D007210 2.6e-35 153.7 293 39.2
Cfa001648 Carpinus fangiana HOM05D002510 ORTHO05D007210 4.4e-35 152.9 293 38.6
AUR62033005 Chenopodium quinoa HOM05D002510 ORTHO05D007210 4.4e-35 152.9 293 38.6
Eucgr.G02835 Eucalyptus grandis HOM05D002510 ORTHO05D007210 4.4e-35 152.9 294 38.1
AUR62038657 Chenopodium quinoa HOM05D002510 ORTHO05D007210 7.6e-35 152.1 316 36.7
Oeu014387.1 Olea europaea HOM05D002510 ORTHO05D007210 7.6e-35 152.1 287 39.0
ECA233G4317 Erigeron canadensis HOM05D002510 ORTHO05D007210 9.9e-35 151.8 305 37.7
Migut.F01756 Erythranthe guttata HOM05D002510 ORTHO05D007210 1.7e-34 151.0 293 38.9
Rhsim09G0151500 Rhododendron simsii HOM05D002510 ORTHO05D007210 2.2e-34 150.6 305 37.7
Lsat_1_v5_gn_8_20140 Lactuca sativa HOM05D002510 ORTHO05D007210 3.7e-34 149.8 291 38.8
PSO339G3140 Papaver somniferum HOM05D002510 ORTHO05D007210 6.4e-34 149.1 294 38.4
FAN10G0968 Fragaria x ananassa HOM05D002510 ORTHO05D007210 8.3e-34 148.7 294 38.4
FAN10G3768 Fragaria x ananassa HOM05D002510 ORTHO05D007210 8.3e-34 148.7 294 38.4
PSO384G1458 Papaver somniferum HOM05D002510 ORTHO05D007210 1.1e-33 148.3 294 38.1
QL08p055755 Quercus lobata HOM05D002510 ORTHO05D007210 2.4e-33 147.1 292 39.4
THA.LOC104827301 Tarenaya hassleriana HOM05D002510 ORTHO05D007210 2.4e-33 147.1 292 37.7
FAN03G2366 Fragaria x ananassa HOM05D002510 ORTHO05D007210 5.4e-33 146.0 294 37.8
ATR0048G055 Amborella trichopoda HOM05D002510 ORTHO05D007210 1.2e-32 144.8 292 37.3
Aqoxy2G01930 Aquilegia oxysepala HOM05D002510 ORTHO05D007210 2.1e-32 144.1 293 37.9
Zm00001eb378830 Zea mays HOM05D002510 ORTHO05D007210 2.1e-32 144.1 296 35.8
MD07G1174500 Malus domestica HOM05D002510 ORTHO05D007210 2.7e-32 143.7 292 38.0
RcHm_v2.0_Chr1g0363331 Rosa chinensis HOM05D002510 ORTHO05D007210 2.7e-32 143.7 293 37.9
vmacro04870 Vaccinium macrocarpon HOM05D002510 ORTHO05D007210 2.7e-32 143.7 321 35.8
Ca_10569_v3 Cicer arietinum L. HOM05D002800 ORTHO05D008563 4.6e-32 142.9 275 39.6
Manes.10G046500 Manihot esculenta HOM05D002510 ORTHO05D007210 1.0e-31 141.7 305 36.4
Hma1.2p1_0039F.1_g024760 Hydrangea macrophylla HOM05D002510 ORTHO05D007210 2.3e-31 140.6 252 40.5
Hund12052 Selenicereus undatus HOM05D002510 ORTHO05D007210 2.3e-31 140.6 293 36.2
Ah.08g213550 Amaranthus hybridus HOM05D002510 ORTHO05D007210 8.6e-31 138.7 292 36.6
Sc09g0006280 Simmondsia chinensis HOM05D002510 ORTHO05D007210 8.6e-31 138.7 294 34.7
unitig_26.g9080 Utricularia gibba HOM05D002510 ORTHO05D007210 2.8e-29 133.7 297 36.4
Nitab4.5_0000534g0010 Nicotiana tabacum HOM05D002510 ORTHO05D007210 6.2e-29 132.5 211 42.2
HPP92_008761 Vanilla planifolia HOM05D002510 ORTHO05D007210 8.1e-29 132.1 271 37.6
Nitab4.5_0001053g0050 Nicotiana tabacum HOM05D002510 ORTHO05D007210 4.0e-28 129.8 314 34.4
EL10Ac3g06545 Beta vulgaris HOM05D002510 ORTHO05D007210 1.5e-27 127.9 254 38.2
FAN06G2145 Fragaria x ananassa HOM05D002510 ORTHO05D007210 1.7e-26 124.4 211 41.7
Aa31LG1G20400 Aethionema arabicum HOM05D002510 ORTHO05D007210 3.8e-26 123.2 288 35.4
Ciclev10030885m.g Citrus clementina HOM05D002510 ORTHO05D007210 4.9e-26 122.9 195 41.5
CSS0007795 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D007210 1.9e-25 120.9 278 35.3
SMO364G0963 Selaginella moellendorffii HOM05D002510 ORTHO05D007210 4.2e-25 119.8 291 30.9
Pp3c15_14500 Physcomitrium patens HOM05D002510 ORTHO05D007210 4.6e-24 116.3 295 30.5
Prupe.2G213300 Prunus persica HOM05D002510 ORTHO05D007210 6.0e-24 115.9 206 38.3
FvH4_7g19460 Fragaria vesca HOM05D002510 ORTHO05D007210 1.7e-23 114.4 207 39.6
AagrBONN_evm.TU.Sc2ySwM_344.3754 Anthoceros agrestis HOM05D002510 ORTHO05D007210 9.6e-22 108.6 291 33.0
Haze_16889 Corylus avellana HOM05D002510 ORTHO05D007210 1.6e-21 107.8 174 43.1
Os04g0519925 Oryza sativa ssp. japonica HOM05D002510 ORTHO05D007210 1.6e-21 107.8 267 32.6
Mapoly0061s0015 Marchantia polymorpha HOM05D002510 ORTHO05D007210 1.9e-17 94.4 211 33.6
Lsat_1_v5_gn_9_123180 Lactuca sativa HOM05D002510 ORTHO05D007210 1.0e-15 88.6 170 39.4
SHI21362 Sapria himalayana HOM05D002510 ORTHO05D007210 4.3e-14 83.2 176 36.9
Pp3c9_12500 Physcomitrium patens HOM05D002510 ORTHO05D007210 2.8e-13 80.5 289 26.6
HPP92_008619 Vanilla planifolia HOM05D002510 ORTHO05D007210 1.4e-12 78.2 156 38.5
SEGI_07815 Sequoiadendron giganteum HOM05D002510 ORTHO05D007210 4.2e-09 66.6 81 45.7
A03p08150 Brassica napus HOM05D002510 ORTHO05D007210 9.3e-09 65.5 77 51.9
Nitab4.5_0000011g0280 Nicotiana tabacum HOM05D001171 ORTHO05D006126 7.9e-08 62.4 183 29.0
CAN.G828.1 Capsicum annuum HOM05D001171 ORTHO05D006126 2.3e-07 60.8 183 30.6
Oeu058919.3 Olea europaea HOM05D001171 ORTHO05D006126 3.0e-07 60.5 280 26.4
Nitab4.5_0001098g0060 Nicotiana tabacum HOM05D001171 ORTHO05D006126 3.9e-07 60.1 183 29.0
TWI36G0373 Tripterygium wilfordii HOM05D001171 ORTHO05D006126 5.1e-07 59.7 275 25.5
Migut.E00023 Erythranthe guttata HOM05D001171 ORTHO05D006126 8.7e-07 58.9 276 25.4
SalBow8G5464 Salvia bowleyana HOM05D001171 ORTHO05D006126 8.7e-07 58.9 277 27.1
Cc00_g13520 Coffea canephora HOM05D001171 ORTHO05D006126 1.5e-06 58.2 274 27.4
Sopen12g015420 Solanum pennellii HOM05D001171 ORTHO05D006126 1.5e-06 58.2 275 28.0
Solyc12g035490.1 Solanum lycopersicum HOM05D001171 ORTHO05D006126 1.9e-06 57.8 183 30.1
Ah.03g136230 Amaranthus hybridus HOM05D001171 ORTHO05D006126 2.5e-06 57.4 278 26.3
Duzib128G0012 Durio zibethinus HOM05D002510 ORTHO05D007210 4.3e-06 56.6 125 34.4
CSS0006395 Camellia sinensis var. sinensis HOM05D001171 ORTHO05D006126 5.6e-06 56.2 183 29.0
CSS0011449 Camellia sinensis var. sinensis HOM05D001171 ORTHO05D006126 5.6e-06 56.2 183 29.0
C06p38700 Brassica napus HOM05D001171 ORTHO05D006126 7.4e-06 55.8 277 28.5
BolC6t38960H Brassica oleracea HOM05D001171 ORTHO05D006126 7.4e-06 55.8 277 28.5
Peaxi162Scf00518g00436 Petunia axillaris HOM05D001171 ORTHO05D006126 7.4e-06 55.8 183 27.9
ATR0561G160 Amborella trichopoda HOM05D001171 ORTHO05D006126 9.6e-06 55.5 182 29.7
Phvul.002G174700 Phaseolus vulgaris HOM05D001171 ORTHO05D006126 9.6e-06 55.5 182 27.5


User provided reference genes

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