Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr21g0305961 Lupinus albus HOM05D001639 ORTHO05D239808 8.1e-82 307.0 152 100.0
Lalb_Chr02g0141921 Lupinus albus HOM05D001639 ORTHO05D004140 1.4e-44 183.3 109 83.5
Glyma.10G213200 Glycine max HOM05D001639 ORTHO05D004140 4.8e-34 148.3 106 71.7
Glyma.20G177800 Glycine max HOM05D001639 ORTHO05D004140 1.6e-32 143.3 119 64.7
Cfa001598 Carpinus fangiana HOM05D001639 ORTHO05D004140 2.7e-32 142.5 116 63.8
Haze_16931 Corylus avellana HOM05D001639 ORTHO05D004140 7.7e-32 141.0 116 62.9
Phvul.007G092200 Phaseolus vulgaris HOM05D001639 ORTHO05D004140 1.7e-31 139.8 136 58.1
TPR.G40285 Trifolium pratense HOM05D001639 ORTHO05D004140 6.5e-31 137.9 137 54.0
Lj5g0017893 Lotus japonicus HOM05D001639 ORTHO05D004140 1.1e-30 137.1 113 61.9
VMungo0720G0568 Vigna mungo HOM05D001639 ORTHO05D004140 1.5e-30 136.7 102 67.6
Ca_10588_v3 Cicer arietinum L. HOM05D001639 ORTHO05D004140 5.5e-30 134.8 119 60.5
Psat6g184800 Pisum sativum HOM05D001639 ORTHO05D004140 1.2e-29 133.7 119 58.0
CiPaw.02G176300 Carya illinoinensis HOM05D001639 ORTHO05D004140 1.8e-28 129.8 108 61.1
Medtr1g095780 Medicago truncatula HOM05D001639 ORTHO05D004140 2.6e-27 125.9 124 53.2
CiPaw.01G276100 Carya illinoinensis HOM05D001639 ORTHO05D004140 9.8e-27 124.0 113 54.9
arahy.Tifrunner.gnm1.ann1.66TP8S Arachis hypogaea HOM05D001639 ORTHO05D004140 6.3e-26 121.3 119 58.0
Prupe.2G217800 Prunus persica HOM05D001639 ORTHO05D004140 6.3e-26 121.3 115 54.8
arahy.Tifrunner.gnm1.ann1.ME3VYR Arachis hypogaea HOM05D001639 ORTHO05D004140 1.8e-25 119.8 118 58.5
QL08p056763 Quercus lobata HOM05D001639 ORTHO05D004140 1.8e-25 119.8 118 55.1
MD01G1130600 Malus domestica HOM05D001639 ORTHO05D004140 1.7e-23 113.2 124 45.2
MD07G1178700 Malus domestica HOM05D001639 ORTHO05D004140 1.1e-22 110.5 120 46.7
RcHm_v2.0_Chr1g0364061 Rosa chinensis HOM05D001639 ORTHO05D004140 2.5e-22 109.4 113 53.1
FvH4_7g20100 Fragaria vesca HOM05D001639 ORTHO05D004140 1.6e-21 106.7 129 48.1
FAN06G3703 Fragaria x ananassa HOM05D001639 ORTHO05D004140 2.8e-21 105.9 129 48.1
CSS0019747 Camellia sinensis var. sinensis HOM05D001639 ORTHO05D004140 8.8e-20 100.9 116 50.0
Dinv31349 Davidia involucrata HOM05D001639 ORTHO05D004140 2.6e-19 99.4 113 47.8
FAN03G2481 Fragaria x ananassa HOM05D001639 ORTHO05D004140 3.4e-19 99.0 129 45.7
Cpa.g.sc60.50 Carica papaya HOM05D001639 ORTHO05D004140 9.8e-19 97.4 121 44.6
FAN10G2085 Fragaria x ananassa HOM05D001639 ORTHO05D004140 1.7e-18 96.7 128 43.8
Actinidia13005 Actinidia chinensis HOM05D001639 ORTHO05D004140 2.8e-18 95.9 115 48.7
Hma1.2p1_0453F.1_g156050 Hydrangea macrophylla HOM05D001639 ORTHO05D004140 2.8e-18 95.9 102 50.0
Atru.chr12.647 Acer truncatum HOM05D001639 ORTHO05D004140 3.7e-18 95.5 123 43.9
Atru.chr12.674 Acer truncatum HOM05D001639 ORTHO05D004140 3.7e-18 95.5 123 43.9
COL.COLO4_23728 Corchorus olitorius HOM05D001639 ORTHO05D004140 3.7e-18 95.5 99 50.5
Lj1A922T71 Lonicera japonica HOM05D001639 ORTHO05D004140 3.7e-18 95.5 112 49.1
Duzib128G0828 Durio zibethinus HOM05D001639 ORTHO05D004140 4.9e-18 95.1 92 53.3
FAN01G0541 Fragaria x ananassa HOM05D001639 ORTHO05D004140 8.3e-18 94.4 128 43.0
AUR62020778 Chenopodium quinoa HOM05D001639 ORTHO05D004140 1.1e-17 94.0 145 37.2
Gorai.002G143300 Gossypium raimondii HOM05D001639 ORTHO05D004140 1.1e-17 94.0 123 46.3
Ciclev10030708m.g Citrus clementina HOM05D001639 ORTHO05D004140 1.4e-17 93.6 113 49.6
vmacro04888 Vaccinium macrocarpon HOM05D001639 ORTHO05D004140 1.4e-17 93.6 119 45.4
Potri.008G043700 Populus trichocarpa HOM05D001639 ORTHO05D004140 1.8e-17 93.2 127 43.3
Gohir.D01G117800 Gossypium hirsutum HOM05D001639 ORTHO05D004140 2.4e-17 92.8 123 44.7
Thecc.10G068700 Theobroma cacao HOM05D001639 ORTHO05D004140 2.4e-17 92.8 98 51.0
TAR633G2433 Trochodendron aralioides HOM05D001639 ORTHO05D004140 2.4e-17 92.8 96 47.9
Lj2g0005885 Lotus japonicus HOM05D001639 ORTHO05D004140 4.1e-17 92.0 137 48.2
Sabra08G0030200 Salix brachista HOM05D001639 ORTHO05D004140 4.1e-17 92.0 125 44.0
AUR62027922 Chenopodium quinoa HOM05D001639 ORTHO05D004140 5.4e-17 91.7 145 36.6
CsaV3_5G036460 Cucumis sativus L. HOM05D001639 ORTHO05D004140 1.2e-16 90.5 108 47.2
Sc20g0002120 Simmondsia chinensis HOM05D001639 ORTHO05D004140 1.6e-16 90.1 111 41.4
Duzib106G0065 Durio zibethinus HOM05D001639 ORTHO05D004140 2.0e-16 89.7 101 46.5
MELO3C012444.2 Cucumis melo HOM05D001639 ORTHO05D004140 2.7e-16 89.4 108 47.2
Gohir.A01G133400 Gossypium hirsutum HOM05D001639 ORTHO05D004140 2.7e-16 89.4 123 44.7
Lsat_1_v5_gn_2_114120 Lactuca sativa HOM05D001639 ORTHO05D004140 2.7e-16 89.4 92 47.8
GSVIVG01016323001 Vitis vinifera HOM05D001639 ORTHO05D004140 3.5e-16 89.0 110 47.3
TAR369G0055 Trochodendron aralioides HOM05D001639 ORTHO05D004140 4.5e-16 88.6 112 46.4
Dinv11803 Davidia involucrata HOM05D001639 ORTHO05D004140 5.9e-16 88.2 115 44.3
Actinidia28947 Actinidia chinensis HOM05D001639 ORTHO05D004140 7.8e-16 87.8 113 45.1
Manes.10G043100 Manihot esculenta HOM05D001639 ORTHO05D004140 7.8e-16 87.8 109 46.8
Thhalv10016258m.g Eutrema salsugineum HOM05D001639 ORTHO05D004140 1.0e-15 87.4 113 42.5
Rhsim09G0154200 Rhododendron simsii HOM05D001639 ORTHO05D004140 1.0e-15 87.4 136 43.4
Sopen04g020690 Solanum pennellii HOM05D001639 ORTHO05D004140 1.0e-15 87.4 127 34.6
Solyc04g050040.3 Solanum lycopersicum HOM05D001639 ORTHO05D004140 1.3e-15 87.0 126 34.9
CSS0047322 Camellia sinensis var. sinensis HOM05D001639 ORTHO05D004140 1.7e-15 86.7 113 42.5
Nitab4.5_0000061g0120 Nicotiana tabacum HOM05D001639 ORTHO05D004140 2.3e-15 86.3 118 40.7
Peaxi162Scf00373g00710 Petunia axillaris HOM05D001639 ORTHO05D004140 2.3e-15 86.3 115 39.1
HanXRQChr14g0440781 Helianthus annuus HOM05D001639 ORTHO05D004140 2.9e-15 85.9 77 51.9
TWI38G1401 Tripterygium wilfordii HOM05D001639 ORTHO05D004140 2.9e-15 85.9 121 43.8
CAN.G925.4 Capsicum annuum HOM05D001639 ORTHO05D004140 3.8e-15 85.5 89 46.1
Aa31sc26G20 Aethionema arabicum HOM05D001639 ORTHO05D004140 5.0e-15 85.1 92 46.7
AL4G31920 Arabidopsis lyrata HOM05D001639 ORTHO05D004140 5.0e-15 85.1 113 42.5
Sed0012976 Sechium edule HOM05D001639 ORTHO05D004140 5.0e-15 85.1 85 51.8
ClCG05G020850 Citrullus lanatus HOM05D001639 ORTHO05D004140 6.6e-15 84.7 109 45.9
PGR142G2027 Punica granatum HOM05D001639 ORTHO05D004140 6.6e-15 84.7 120 42.5
Nitab4.5_0003116g0030 Nicotiana tabacum HOM05D001639 ORTHO05D004140 8.6e-15 84.3 118 40.7
Carub.0004s1757 Capsella rubella HOM05D001639 ORTHO05D004140 1.9e-14 83.2 90 48.9
PSO339G2101 Papaver somniferum HOM05D001639 ORTHO05D004140 3.3e-14 82.4 103 41.7
Sp4g18070 Schrenkiella parvula HOM05D001639 ORTHO05D004140 3.3e-14 82.4 114 40.4
Potri.010G217900 Populus trichocarpa HOM05D001639 ORTHO05D004140 7.3e-14 81.3 96 46.9
ECA238G1467 Erigeron canadensis HOM05D001639 ORTHO05D004140 2.1e-13 79.7 81 46.9
PSO384G0277 Papaver somniferum HOM05D001639 ORTHO05D004140 2.1e-13 79.7 102 41.2
EL10Ac2g03564 Beta vulgaris HOM05D001639 ORTHO05D004140 2.8e-13 79.3 150 36.0
AT2G35800 Arabidopsis thaliana HOM05D001639 ORTHO05D004140 3.6e-13 79.0 92 43.5
Sabra10G0168600 Salix brachista HOM05D001639 ORTHO05D004140 6.1e-13 78.2 139 38.8
Eucgr.G02805 Eucalyptus grandis HOM05D001639 ORTHO05D004140 1.0e-12 77.4 116 37.1
Hund22486 Selenicereus undatus HOM05D001639 ORTHO05D004140 3.0e-12 75.9 146 38.4
CARHR130070 Cardamine hirsuta HOM05D001639 ORTHO05D004140 4.0e-12 75.5 114 39.5
ATR1159G089 Amborella trichopoda HOM05D001639 ORTHO05D004140 6.8e-12 74.7 118 38.1
Gohir.A06G178800 Gossypium hirsutum HOM05D001639 ORTHO05D004140 6.8e-12 74.7 145 34.5
BcaB01g03879 Brassica carinata HOM05D001639 ORTHO05D004140 1.2e-11 73.9 110 39.1
BcaC01g05705 Brassica carinata HOM05D001639 ORTHO05D004140 1.5e-11 73.6 94 39.4
BraA04t18225Z Brassica rapa HOM05D001639 ORTHO05D004140 1.5e-11 73.6 105 39.0
Gorai.010G203900 Gossypium raimondii HOM05D001639 ORTHO05D004140 2.0e-11 73.2 145 34.5
C03p23000 Brassica napus HOM05D001639 ORTHO05D004140 2.6e-11 72.8 94 39.4
BolC3t14701H Brassica oleracea HOM05D001639 ORTHO05D004140 2.6e-11 72.8 94 39.4
A04p27270 Brassica napus HOM05D001639 ORTHO05D004140 3.4e-11 72.4 96 41.7
Oeu051327.1 Olea europaea HOM05D001639 ORTHO05D004140 3.4e-11 72.4 139 35.3
BcaB06g28874 Brassica carinata HOM05D001639 ORTHO05D004140 4.4e-11 72.0 99 42.4
Gohir.D06G174400 Gossypium hirsutum HOM05D001639 ORTHO05D004140 7.5e-11 71.2 92 39.1
BraA03t11227Z Brassica rapa HOM05D001639 ORTHO05D004140 1.3e-10 70.5 91 39.6
Ah.10g033000 Amaranthus hybridus HOM05D001639 ORTHO05D004140 1.7e-10 70.1 147 34.0
Gorai.010G204000 Gossypium raimondii HOM05D001639 ORTHO05D004140 2.9e-10 69.3 97 38.1
Nn2g13007 Nelumbo nucifera HOM05D001639 ORTHO05D004140 2.9e-10 69.3 111 38.7
A03p19750 Brassica napus HOM05D001639 ORTHO05D004140 8.3e-10 67.8 78 41.0
C04p64790 Brassica napus HOM05D001639 ORTHO05D004140 8.3e-10 67.8 105 37.1
BolC4t27956H Brassica oleracea HOM05D001639 ORTHO05D004140 8.3e-10 67.8 105 37.1
HanXRQChr07g0200411 Helianthus annuus HOM05D001639 ORTHO05D004140 1.4e-09 67.0 84 41.7
Gohir.D06G174300 Gossypium hirsutum HOM05D001639 ORTHO05D004140 1.8e-09 66.6 102 37.3
BcaC02g07667 Brassica carinata HOM05D001639 ORTHO05D004140 4.1e-09 65.5 105 36.2
Nn2g10677 Nelumbo nucifera HOM05D001639 ORTHO05D004140 4.1e-09 65.5 107 36.4
Gohir.A06G178700 Gossypium hirsutum HOM05D001639 ORTHO05D004140 5.4e-09 65.1 113 37.2
Lalb_Chr09g0333471 Lupinus albus HOM05D001639 ORTHO05D238186 1.6e-08 63.5 31 96.8
Cc09_g02780 Coffea canephora HOM05D001639 ORTHO05D004140 2.7e-08 62.8 61 47.5
DCAR_006463 Daucus carota HOM05D001639 ORTHO05D004140 1.0e-07 60.8 112 35.7
Sed0023440 Sechium edule HOM05D001639 ORTHO05D004140 3.3e-06 55.8 82 39.0
Manes.07G102700 Manihot esculenta HOM05D001639 ORTHO05D004140 5.6e-06 55.1 105 36.2


User provided reference genes

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