Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr21g0305631 Lupinus albus HOM05D005529 ORTHO05D006800 3.9e-145 518.1 257 100.0
Lalb_Chr06g0161811 Lupinus albus HOM05D005529 ORTHO05D006800 3.2e-139 498.4 257 94.9
Lj5g0011658 Lotus japonicus HOM05D005529 ORTHO05D006800 7.2e-139 497.3 257 94.9
Medtr1g097380 Medicago truncatula HOM05D005529 ORTHO05D006800 1.0e-137 493.4 257 94.2
Phvul.007G085400 Phaseolus vulgaris HOM05D005529 ORTHO05D006800 5.1e-137 491.1 257 93.8
Psat6g189800 Pisum sativum HOM05D005529 ORTHO05D006800 1.5e-136 489.6 257 93.4
Glyma.10G219900 Glycine max HOM05D005529 ORTHO05D006800 2.0e-136 489.2 256 93.0
Glyma.20G171800 Glycine max HOM05D005529 ORTHO05D006800 4.3e-136 488.0 256 93.0
TPR.G23153 Trifolium pratense HOM05D005529 ORTHO05D006800 4.5e-133 478.0 257 90.7
arahy.Tifrunner.gnm1.ann1.MD2PB3 Arachis hypogaea HOM05D005529 ORTHO05D006800 2.9e-132 475.3 257 91.1
arahy.Tifrunner.gnm1.ann1.PZ5J07 Arachis hypogaea HOM05D005529 ORTHO05D006800 2.9e-132 475.3 257 91.1
VMungo0720G3143 Vigna mungo HOM05D005529 ORTHO05D006800 7.2e-131 470.7 257 90.7
CANSAT25G1808 Cannabis sativa HOM05D005529 ORTHO05D006800 1.3e-127 459.9 257 86.8
Haze_17835 Corylus avellana HOM05D005529 ORTHO05D006800 1.3e-127 459.9 257 87.9
Haze_17841 Corylus avellana HOM05D005529 ORTHO05D006800 1.3e-127 459.9 257 87.9
MD05G1037000 Malus domestica HOM05D005529 ORTHO05D006800 1.3e-127 459.9 257 87.5
CiPaw.15G011100 Carya illinoinensis HOM05D005529 ORTHO05D006800 1.7e-127 459.5 255 87.5
QL02p036323 Quercus lobata HOM05D005529 ORTHO05D006800 3.7e-127 458.4 256 87.9
Prupe.8G045100 Prunus persica HOM05D005529 ORTHO05D006800 6.3e-127 457.6 257 87.5
QL02p036742 Quercus lobata HOM05D005529 ORTHO05D006800 8.2e-127 457.2 256 87.5
RcHm_v2.0_Chr6g0273541 Rosa chinensis HOM05D005529 ORTHO05D006800 1.1e-126 456.8 257 86.4
Thecc.08G196300 Theobroma cacao HOM05D005529 ORTHO05D006800 4.1e-126 454.9 257 86.0
Solyc12g056770.3 Solanum lycopersicum HOM05D005529 ORTHO05D006800 1.6e-125 453.0 257 84.4
Sopen12g029450 Solanum pennellii HOM05D005529 ORTHO05D006800 1.6e-125 453.0 257 84.4
Eucgr.F02670 Eucalyptus grandis HOM05D005529 ORTHO05D006800 2.0e-125 452.6 257 85.2
PGR042G1245 Punica granatum HOM05D005529 ORTHO05D006800 2.6e-125 452.2 257 85.2
Aqoxy6G00458 Aquilegia oxysepala HOM05D005529 ORTHO05D006800 3.5e-125 451.8 257 86.0
CSS0023417 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 1.0e-124 450.3 257 84.0
Migut.C00162 Erythranthe guttata HOM05D005529 ORTHO05D006800 1.3e-124 449.9 256 83.6
Migut.O00737 Erythranthe guttata HOM05D005529 ORTHO05D006800 1.3e-124 449.9 256 83.6
FvH4_2g12750 Fragaria vesca HOM05D005529 ORTHO05D006800 8.5e-124 447.2 257 84.8
FAN15G0152 Fragaria x ananassa HOM05D005529 ORTHO05D006800 8.5e-124 447.2 257 84.8
FAN27G2439 Fragaria x ananassa HOM05D005529 ORTHO05D006800 8.5e-124 447.2 257 84.8
Peaxi162Scf00160g01637 Petunia axillaris HOM05D005529 ORTHO05D006800 1.1e-123 446.8 257 83.3
Actinidia15622 Actinidia chinensis HOM05D005529 ORTHO05D006800 2.5e-123 445.7 257 83.7
CiPaw.16G006900 Carya illinoinensis HOM05D005529 ORTHO05D006800 3.2e-123 445.3 255 85.1
Cc10_g06360 Coffea canephora HOM05D005529 ORTHO05D006800 4.2e-123 444.9 257 82.9
COL.COLO4_05242 Corchorus olitorius HOM05D005529 ORTHO05D006800 5.5e-123 444.5 257 84.0
GSVIVG01013675001 Vitis vinifera HOM05D005529 ORTHO05D006800 7.2e-123 444.1 257 83.7
FAN24G1078 Fragaria x ananassa HOM05D005529 ORTHO05D006800 9.4e-123 443.7 257 84.4
CAN.G26.7 Capsicum annuum HOM05D005529 ORTHO05D006800 2.1e-122 442.6 257 82.5
Cpa.g.sc26.128 Carica papaya HOM05D005529 ORTHO05D006800 4.7e-122 441.4 257 83.7
Sc26g0003120 Simmondsia chinensis HOM05D005529 ORTHO05D006800 6.1e-122 441.0 257 82.5
CSS0035962 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 1.4e-121 439.9 257 82.9
Potri.005G199600 Populus trichocarpa HOM05D005529 ORTHO05D006800 2.3e-121 439.1 254 85.0
CSS0031927 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 6.7e-121 437.6 257 82.5
Lj4A706T78 Lonicera japonica HOM05D005529 ORTHO05D006800 6.7e-121 437.6 256 81.2
MSTRG.965 Avicennia marina HOM05D005529 ORTHO05D006800 8.8e-121 437.2 257 81.3
CsaV3_6G004830 Cucumis sativus L. HOM05D005529 ORTHO05D006800 2.0e-120 436.0 257 80.2
Atru.chr13.1964 Acer truncatum HOM05D005529 ORTHO05D006800 3.3e-120 435.3 257 81.7
Sabra05G0151800 Salix brachista HOM05D005529 ORTHO05D006800 5.7e-120 434.5 254 84.3
Nitab4.5_0004541g0010 Nicotiana tabacum HOM05D005529 ORTHO05D006800 2.8e-119 432.2 265 80.8
PSO675G2610 Papaver somniferum HOM05D005529 ORTHO05D006800 2.8e-119 432.2 257 81.7
PSO541G1243 Papaver somniferum HOM05D005529 ORTHO05D006800 3.7e-119 431.8 257 81.7
Ciclev10002214m.g Citrus clementina HOM05D005529 ORTHO05D006800 4.8e-119 431.4 256 82.8
Gohir.A05G247200 Gossypium hirsutum HOM05D005529 ORTHO05D006800 4.8e-119 431.4 257 82.9
Gohir.D05G248700 Gossypium hirsutum HOM05D005529 ORTHO05D006800 4.8e-119 431.4 257 82.9
Gorai.009G259800 Gossypium raimondii HOM05D005529 ORTHO05D006800 4.8e-119 431.4 257 82.9
PGSC0003DMG400016963 Solanum tuberosum HOM05D005529 ORTHO05D006800 6.3e-119 431.0 302 71.5
Sed0025527 Sechium edule HOM05D005529 ORTHO05D006800 1.1e-118 430.3 257 79.4
Ah.05g168410 Amaranthus hybridus HOM05D005529 ORTHO05D006800 1.4e-118 429.9 257 81.3
AUR62032105 Chenopodium quinoa HOM05D005529 ORTHO05D006800 1.4e-118 429.9 271 78.2
Manes.02G186100 Manihot esculenta HOM05D005529 ORTHO05D006800 3.1e-118 428.7 258 81.0
Oeu027223.1 Olea europaea HOM05D005529 ORTHO05D006800 7.0e-118 427.6 257 81.3
TWI34G1474 Tripterygium wilfordii HOM05D005529 ORTHO05D006800 1.2e-117 426.8 257 81.7
THA.LOC104800098 Tarenaya hassleriana HOM05D005529 ORTHO05D006800 1.6e-117 426.4 257 80.5
AL2G31360 Arabidopsis lyrata HOM05D005529 ORTHO05D006800 2.7e-117 425.6 257 80.9
BcaC08g46609 Brassica carinata HOM05D005529 ORTHO05D006800 2.7e-117 425.6 257 80.9
A07p37940 Brassica napus HOM05D005529 ORTHO05D006800 2.7e-117 425.6 257 80.9
C06p45850 Brassica napus HOM05D005529 ORTHO05D006800 2.7e-117 425.6 257 80.9
BolC6t39637H Brassica oleracea HOM05D005529 ORTHO05D006800 2.7e-117 425.6 257 80.9
BraA07t31359Z Brassica rapa HOM05D005529 ORTHO05D006800 2.7e-117 425.6 257 80.9
AUR62034931 Chenopodium quinoa HOM05D005529 ORTHO05D006800 3.5e-117 425.2 271 77.1
Thhalv10019028m.g Eutrema salsugineum HOM05D005529 ORTHO05D006800 4.5e-117 424.9 257 80.5
AT1G71790 Arabidopsis thaliana HOM05D005529 ORTHO05D006800 5.9e-117 424.5 257 80.9
Sp5g26810 Schrenkiella parvula HOM05D005529 ORTHO05D006800 5.9e-117 424.5 257 80.5
SpUn0095_0040 Schrenkiella parvula HOM05D005529 ORTHO05D006800 5.9e-117 424.5 257 80.5
DCAR_019977 Daucus carota HOM05D005529 ORTHO05D006800 7.7e-117 424.1 254 79.1
Carub.0002s1855 Capsella rubella HOM05D005529 ORTHO05D006800 1.7e-116 422.9 257 80.2
SGA_v2.0_scaffold161G37858 Striga asiatica HOM05D005529 ORTHO05D006800 2.2e-116 422.5 263 77.9
Manes.18G096400 Manihot esculenta HOM05D005529 ORTHO05D006800 8.5e-116 420.6 258 80.2
Nn1g05167 Nelumbo nucifera HOM05D005529 ORTHO05D006800 4.2e-115 418.3 257 80.2
Cfa018254 Carpinus fangiana HOM05D005529 ORTHO05D006800 1.6e-114 416.4 257 81.3
Aa31LG4G8850 Aethionema arabicum HOM05D005529 ORTHO05D006800 1.4e-113 413.3 257 78.6
ECA247G3042 Erigeron canadensis HOM05D005529 ORTHO05D006800 2.3e-113 412.5 255 76.9
unitig_32.g11170 Utricularia gibba HOM05D005529 ORTHO05D006800 6.8e-113 411.0 257 76.7
HanXRQChr11g0320531 Helianthus annuus HOM05D005529 ORTHO05D006800 1.2e-112 410.2 258 76.7
Dinv41017 Davidia involucrata HOM05D005529 ORTHO05D006800 1.4e-110 403.3 230 85.2
ECA232G2783 Erigeron canadensis HOM05D005529 ORTHO05D006800 3.1e-110 402.1 257 74.7
CDE04G0217 Ceratophyllum demersum HOM05D005529 ORTHO05D006800 5.4e-110 401.4 257 76.3
ClCG08G007150 Citrullus lanatus HOM05D005529 ORTHO05D006800 9.1e-110 400.6 257 74.3
Lsat_1_v5_gn_9_42620 Lactuca sativa HOM05D005529 ORTHO05D006800 9.1e-110 400.6 253 75.9
Lsat_1_v5_gn_1_5401 Lactuca sativa HOM05D005529 ORTHO05D006800 1.7e-108 396.4 254 75.2
Nn5g28882 Nelumbo nucifera HOM05D005529 ORTHO05D006800 2.0e-104 382.9 250 74.8
Os03g0381200 Oryza sativa ssp. japonica HOM05D005529 ORTHO05D006800 2.0e-104 382.9 257 73.2
TAR381G0607 Trochodendron aralioides HOM05D005529 ORTHO05D006800 2.2e-103 379.4 280 70.0
vmacro21201 Vaccinium macrocarpon HOM05D005529 ORTHO05D006800 3.1e-102 375.6 214 82.2
Duzib093G1833 Durio zibethinus HOM05D005529 ORTHO05D006800 2.3e-100 369.4 257 73.9
Hma1.2p1_0358F.1_g134920 Hydrangea macrophylla HOM05D005529 ORTHO05D006800 3.6e-98 362.1 214 79.9
ATR0564G028 Amborella trichopoda HOM05D005529 ORTHO05D006800 1.4e-97 360.1 231 74.0
Nitab4.5_0004295g0010 Nicotiana tabacum HOM05D005529 ORTHO05D006800 1.8e-97 359.8 223 78.9
MELO3C019956.2 Cucumis melo HOM05D005529 ORTHO05D006800 6.8e-97 357.8 257 70.0
Lj7C387G8 Lonicera japonica HOM05D005529 ORTHO05D006800 4.1e-94 348.6 256 66.4
TAR625G0192 Trochodendron aralioides HOM05D005529 ORTHO05D006800 9.8e-88 327.4 198 80.8
Pp3c1_32040 Physcomitrium patens HOM05D005529 ORTHO05D006800 1.7e-87 326.6 247 66.4
Mapoly0006s0028 Marchantia polymorpha HOM05D005529 ORTHO05D006800 2.4e-86 322.8 247 65.6
SMO141G0273 Selaginella moellendorffii HOM05D005529 ORTHO05D006800 2.3e-84 316.2 249 63.5
CDE07G0226 Ceratophyllum demersum HOM05D005529 ORTHO05D006800 1.9e-83 313.2 203 74.4
AagrBONN_evm.TU.Sc2ySwM_228.4378 Anthoceros agrestis HOM05D005529 ORTHO05D006800 3.6e-82 308.9 262 61.5
MD10G1039400 Malus domestica HOM05D005529 ORTHO05D006800 1.2e-77 293.9 159 88.7
Ca_10643_v3 Cicer arietinum L. HOM05D005529 ORTHO05D006800 1.4e-70 270.4 142 93.0
Zm00001eb018520 Zea mays HOM05D005529 ORTHO05D006800 1.0e-68 264.2 170 74.1
CARHR290990 Cardamine hirsuta HOM05D005529 ORTHO05D006800 1.5e-67 260.4 153 81.0
Dinv13098 Davidia involucrata HOM05D005529 ORTHO05D006800 7.6e-64 248.1 132 87.9
Glyma.06G212500 Glycine max HOM05D005529 ORTHO05D006800 9.3e-62 241.1 130 90.8
PRCOL_00004850 Prasinoderma coloniale HOM05D005529 ORTHO05D006800 1.1e-59 234.2 254 49.6
MD10G1040900 Malus domestica HOM05D005529 ORTHO05D006800 4.0e-57 225.7 239 54.0
Haze_27340 Corylus avellana HOM05D005529 ORTHO05D006800 9.0e-57 224.6 247 45.3
Glyma.09G074800 Glycine max HOM05D005529 ORTHO05D006800 6.4e-55 218.4 114 93.9
CSS0032133 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 8.7e-52 208.0 140 71.4
Actinidia02780 Actinidia chinensis HOM05D005529 ORTHO05D006800 3.3e-51 206.1 112 86.6
Cfa022509 Carpinus fangiana HOM05D005529 ORTHO05D006800 1.5e-48 197.2 274 40.1
Glyma.20G171766 Glycine max HOM05D005529 ORTHO05D006800 5.8e-48 195.3 105 89.5
Lsat_1_v5_gn_8_71180 Lactuca sativa HOM05D005529 ORTHO05D006800 2.4e-46 189.9 156 60.9
Rhsim06G0089200 Rhododendron simsii HOM05D005529 ORTHO05D006800 1.2e-45 187.6 105 83.8
Glyma.04G140500 Glycine max HOM05D005529 ORTHO05D006800 7.9e-45 184.9 104 89.4
AUR62022308 Chenopodium quinoa HOM05D005529 ORTHO05D006800 2.1e-42 176.8 257 44.4
HPP92_020840 Vanilla planifolia HOM05D005529 ORTHO05D006800 6.2e-42 175.3 105 79.0
BcaC08g46606 Brassica carinata HOM05D005529 ORTHO05D006800 5.3e-41 172.2 105 81.0
Lsat_1_v5_gn_3_73520 Lactuca sativa HOM05D005529 ORTHO05D006800 3.1e-33 146.4 91 70.3
Actinidia17753 Actinidia chinensis HOM05D005529 ORTHO05D006800 1.0e-31 141.4 117 63.2
SalBow7G1408 Salvia bowleyana HOM05D005529 ORTHO05D006800 6.3e-26 122.1 67 86.6
HPP92_020745 Vanilla planifolia HOM05D005529 ORTHO05D006800 1.4e-25 120.9 96 63.5
HPP92_020744 Vanilla planifolia HOM05D005529 ORTHO05D006800 2.0e-24 117.1 102 59.8
MD10G1041000 Malus domestica HOM05D005529 ORTHO05D006800 7.4e-19 98.6 60 78.3
HPP92_020839 Vanilla planifolia HOM05D005529 ORTHO05D006800 2.7e-13 80.1 55 70.9
Glyma.16G101900 Glycine max HOM05D005529 ORTHO05D006800 8.8e-12 75.1 60 65.0
VMungo0464G1177 Vigna mungo HOM05D005529 ORTHO05D006800 3.1e-09 66.6 40 85.0


User provided reference genes

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