Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr21g0305611 Lupinus albus HOM05D006901 ORTHO05D008582 2.7e-77 292.0 154 100.0
Psat6g189960 Pisum sativum HOM05D006901 ORTHO05D008582 3.7e-50 201.8 156 72.4
TPR.G792 Trifolium pratense HOM05D006901 ORTHO05D008582 4.1e-49 198.4 157 72.6
Phvul.007G084500 Phaseolus vulgaris HOM05D006901 ORTHO05D008582 1.6e-48 196.4 158 72.8
Glyma.20G171000 Glycine max HOM05D006901 ORTHO05D008582 3.5e-48 195.3 153 71.9
Glyma.10G220600 Glycine max HOM05D006901 ORTHO05D008582 1.1e-46 190.3 154 70.8
Ca_10653_v3 Cicer arietinum L. HOM05D006901 ORTHO05D008582 9.5e-46 187.2 154 69.5
Medtr1g097570 Medicago truncatula HOM05D006901 ORTHO05D008582 2.3e-44 182.6 154 67.5
VMungo0720G0575 Vigna mungo HOM05D006901 ORTHO05D008582 4.0e-44 181.8 158 68.4
Lj5g0019877 Lotus japonicus HOM05D006901 ORTHO05D008582 4.4e-43 178.3 157 67.5
arahy.Tifrunner.gnm1.ann1.96Y3Q8 Arachis hypogaea HOM05D006901 ORTHO05D008582 2.7e-40 169.1 153 66.0
arahy.Tifrunner.gnm1.ann1.YZ7MCJ Arachis hypogaea HOM05D006901 ORTHO05D008582 6.0e-40 167.9 154 66.9
QL02p037117 Quercus lobata HOM05D006901 ORTHO05D008582 2.3e-39 166.0 158 67.1
QL02p036605 Quercus lobata HOM05D006901 ORTHO05D008582 3.9e-39 165.2 160 66.2
Lj5g0009364 Lotus japonicus HOM05D006901 ORTHO05D008582 1.4e-36 156.8 157 63.1
TAR376G0851 Trochodendron aralioides HOM05D006901 ORTHO05D008582 2.0e-35 152.9 181 56.4
Gohir.D06G116100 Gossypium hirsutum HOM05D006901 ORTHO05D008582 4.4e-35 151.8 172 57.0
Gorai.010G133900 Gossypium raimondii HOM05D006901 ORTHO05D008582 4.4e-35 151.8 172 57.0
CANSAT25G0969 Cannabis sativa HOM05D006901 ORTHO05D008582 9.9e-35 150.6 116 73.3
CiPaw.16G007900 Carya illinoinensis HOM05D006901 ORTHO05D008582 1.3e-34 150.2 177 57.1
Duzib041G0277 Durio zibethinus HOM05D006901 ORTHO05D008582 6.4e-34 147.9 177 55.4
Potri.002G063100 Populus trichocarpa HOM05D006901 ORTHO05D008582 1.4e-33 146.7 184 52.2
Gohir.A06G111900 Gossypium hirsutum HOM05D006901 ORTHO05D008582 1.9e-33 146.4 154 61.0
Sabra02G0050800 Salix brachista HOM05D006901 ORTHO05D008582 1.2e-32 143.7 184 51.1
Haze_17820 Corylus avellana HOM05D006901 ORTHO05D008582 1.6e-32 143.3 177 54.2
Duzib116G0108 Durio zibethinus HOM05D006901 ORTHO05D008582 1.6e-32 143.3 177 56.5
Thhalv10019220m.g Eutrema salsugineum HOM05D006901 ORTHO05D008582 2.7e-32 142.5 173 54.9
Ciclev10002626m.g Citrus clementina HOM05D006901 ORTHO05D008582 3.5e-32 142.1 185 53.5
Cc10_g06470 Coffea canephora HOM05D006901 ORTHO05D008582 3.5e-32 142.1 172 53.5
Prupe.8G043100 Prunus persica HOM05D006901 ORTHO05D008582 3.5e-32 142.1 144 59.7
Thecc.08G162300 Theobroma cacao HOM05D006901 ORTHO05D008582 3.5e-32 142.1 173 55.5
Duzib093G0981 Durio zibethinus HOM05D006901 ORTHO05D008582 6.0e-32 141.4 149 61.7
Actinidia17766 Actinidia chinensis HOM05D006901 ORTHO05D008582 1.3e-31 140.2 155 57.4
Nitab4.5_0003443g0040 Nicotiana tabacum HOM05D006901 ORTHO05D008582 1.7e-31 139.8 165 54.5
Potri.005G198100 Populus trichocarpa HOM05D006901 ORTHO05D008582 1.7e-31 139.8 184 52.2
Ah.16g108540 Amaranthus hybridus HOM05D006901 ORTHO05D008582 2.3e-31 139.4 164 55.5
Aa31LG4G8920 Aethionema arabicum HOM05D006901 ORTHO05D008582 3.0e-31 139.0 129 67.4
Dinv02470 Davidia involucrata HOM05D006901 ORTHO05D008582 3.9e-31 138.7 172 52.9
Manes.18G095700 Manihot esculenta HOM05D006901 ORTHO05D008582 3.9e-31 138.7 182 52.7
MD05G1035400 Malus domestica HOM05D006901 ORTHO05D008582 6.6e-31 137.9 140 58.6
MD10G1037700 Malus domestica HOM05D006901 ORTHO05D008582 6.6e-31 137.9 113 67.3
Nitab4.5_0003178g0070 Nicotiana tabacum HOM05D006901 ORTHO05D008582 6.6e-31 137.9 165 52.7
Rhsim06G0092600 Rhododendron simsii HOM05D006901 ORTHO05D008582 6.6e-31 137.9 170 56.5
SalBow7G3034 Salvia bowleyana HOM05D006901 ORTHO05D008582 6.6e-31 137.9 161 53.4
Sc02g0003760 Simmondsia chinensis HOM05D006901 ORTHO05D008582 6.6e-31 137.9 171 54.4
Atru.chr13.1989 Acer truncatum HOM05D006901 ORTHO05D008582 8.6e-31 137.5 160 56.2
EL10Ac1g01620 Beta vulgaris HOM05D006901 ORTHO05D008582 8.6e-31 137.5 173 54.3
Sabra05G0150900 Salix brachista HOM05D006901 ORTHO05D008582 8.6e-31 137.5 181 50.8
A07p37880 Brassica napus HOM05D006901 ORTHO05D008582 1.1e-30 137.1 156 54.5
BraA07t31353Z Brassica rapa HOM05D006901 ORTHO05D008582 1.1e-30 137.1 156 54.5
HanXRQChr02g0041271 Helianthus annuus HOM05D006901 ORTHO05D008582 1.5e-30 136.7 157 55.4
PSO675G2506 Papaver somniferum HOM05D006901 ORTHO05D008582 2.5e-30 136.0 164 56.1
MELO3C019969.2 Cucumis melo HOM05D006901 ORTHO05D008582 3.3e-30 135.6 116 66.4
CsaV3_6G004930 Cucumis sativus L. HOM05D006901 ORTHO05D008582 3.3e-30 135.6 162 54.9
PGR042G3646 Punica granatum HOM05D006901 ORTHO05D008582 3.3e-30 135.6 103 73.8
Hma1.2p1_0678F.1_g202120 Hydrangea macrophylla HOM05D006901 ORTHO05D008582 4.3e-30 135.2 170 53.5
RcHm_v2.0_Chr6g0273991 Rosa chinensis HOM05D006901 ORTHO05D008582 4.3e-30 135.2 151 58.3
PGR102G0180 Punica granatum HOM05D006901 ORTHO05D008582 7.3e-30 134.4 133 60.9
TWI60G0595 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 7.3e-30 134.4 127 63.0
PSO541G2877 Papaver somniferum HOM05D006901 ORTHO05D008582 9.6e-30 134.0 164 56.1
EL10Ac4g07716 Beta vulgaris HOM05D006901 ORTHO05D008582 1.6e-29 133.3 157 56.1
Sopen04g028100 Solanum pennellii HOM05D006901 ORTHO05D008582 1.6e-29 133.3 166 51.8
BcaC08g46599 Brassica carinata HOM05D006901 ORTHO05D008582 2.1e-29 132.9 159 51.6
C06p45780 Brassica napus HOM05D006901 ORTHO05D008582 2.1e-29 132.9 159 51.6
Cpa.g.sc26.114 Carica papaya HOM05D006901 ORTHO05D008582 2.1e-29 132.9 95 76.8
Solyc04g072038.1 Solanum lycopersicum HOM05D006901 ORTHO05D008582 2.1e-29 132.9 166 51.8
Lsat_1_v5_gn_1_5120 Lactuca sativa HOM05D006901 ORTHO05D008582 2.8e-29 132.5 166 53.6
CAN.G1183.19 Capsicum annuum HOM05D006901 ORTHO05D008582 3.6e-29 132.1 165 52.1
TWI34G1320 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 3.6e-29 132.1 110 68.2
Actinidia15615 Actinidia chinensis HOM05D006901 ORTHO05D008582 4.7e-29 131.7 134 59.7
AL2G31300 Arabidopsis lyrata HOM05D006901 ORTHO05D008582 4.7e-29 131.7 172 51.7
Carub.0002s1849 Capsella rubella HOM05D006901 ORTHO05D008582 4.7e-29 131.7 93 76.3
Sp5g26760 Schrenkiella parvula HOM05D006901 ORTHO05D008582 4.7e-29 131.7 183 52.5
EL10Ac1g01617 Beta vulgaris HOM05D006901 ORTHO05D008582 6.2e-29 131.3 157 55.4
BolC6t39630H Brassica oleracea HOM05D006901 ORTHO05D008582 6.2e-29 131.3 159 50.9
MSTRG.22112 Avicennia marina HOM05D006901 ORTHO05D008582 8.1e-29 131.0 146 56.2
ClCG08G007260 Citrullus lanatus HOM05D006901 ORTHO05D008582 8.1e-29 131.0 109 69.7
Nn6g32189 Nelumbo nucifera HOM05D006901 ORTHO05D008582 8.1e-29 131.0 180 49.4
PGSC0003DMG400025056 Solanum tuberosum HOM05D006901 ORTHO05D008582 8.1e-29 131.0 161 51.6
CARHR291060 Cardamine hirsuta HOM05D006901 ORTHO05D008582 3.1e-28 129.0 132 59.8
SalBow8G2041 Salvia bowleyana HOM05D006901 ORTHO05D008582 3.1e-28 129.0 147 54.4
FvH4_2g12890 Fragaria vesca HOM05D006901 ORTHO05D008582 6.8e-28 127.9 86 79.1
FAN24G1802 Fragaria x ananassa HOM05D006901 ORTHO05D008582 6.8e-28 127.9 86 79.1
Lj7E386T0 Lonicera japonica HOM05D006901 ORTHO05D008582 6.8e-28 127.9 86 82.6
GSVIVG01013704001 Vitis vinifera HOM05D006901 ORTHO05D008582 6.8e-28 127.9 173 51.4
Nn5g28858 Nelumbo nucifera HOM05D006901 ORTHO05D008582 8.9e-28 127.5 180 48.9
SGA_v2.0_scaffold82G26198 Striga asiatica HOM05D006901 ORTHO05D008582 8.9e-28 127.5 84 78.6
Sed0007149 Sechium edule HOM05D006901 ORTHO05D008582 1.2e-27 127.1 147 58.5
HPP92_002808 Vanilla planifolia HOM05D006901 ORTHO05D008582 1.2e-27 127.1 145 54.5
HPP92_002865 Vanilla planifolia HOM05D006901 ORTHO05D008582 1.2e-27 127.1 145 54.5
CSS0011226 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 1.5e-27 126.7 150 52.7
CSS0025966 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 1.5e-27 126.7 150 52.7
AT1G71730 Arabidopsis thaliana HOM05D006901 ORTHO05D008582 2.0e-27 126.3 178 47.8
FAN15G3138 Fragaria x ananassa HOM05D006901 ORTHO05D008582 2.6e-27 125.9 132 58.3
FAN20G0005 Fragaria x ananassa HOM05D006901 ORTHO05D008582 2.6e-27 125.9 132 58.3
Oeu017620.1 Olea europaea HOM05D006901 ORTHO05D008582 3.4e-27 125.6 112 61.6
Eucgr.F02679 Eucalyptus grandis HOM05D006901 ORTHO05D008582 5.8e-27 124.8 86 75.6
Peaxi162Scf00360g00917 Petunia axillaris HOM05D006901 ORTHO05D008582 7.6e-27 124.4 162 48.8
ECA247G1717 Erigeron canadensis HOM05D006901 ORTHO05D008582 9.9e-27 124.0 84 76.2
FAN27G3188 Fragaria x ananassa HOM05D006901 ORTHO05D008582 9.9e-27 124.0 153 53.6
THA.LOC104810483 Tarenaya hassleriana HOM05D006901 ORTHO05D008582 1.3e-26 123.6 138 59.4
SEGI_14424 Sequoiadendron giganteum HOM05D006901 ORTHO05D008582 3.8e-26 122.1 96 68.8
ATR1120G022 Amborella trichopoda HOM05D006901 ORTHO05D008582 3.2e-25 119.0 125 55.2
unitig_32.g11111 Utricularia gibba HOM05D006901 ORTHO05D008582 7.1e-25 117.9 88 71.6
AagrBONN_evm.TU.Sc2ySwM_228.5132 Anthoceros agrestis HOM05D006901 ORTHO05D008582 8.7e-23 110.9 95 62.1
Pp3c17_20520 Physcomitrium patens HOM05D006901 ORTHO05D008582 1.5e-22 110.2 103 60.2
Os05g0182000 Oryza sativa ssp. japonica HOM05D006901 ORTHO05D008582 1.3e-21 107.1 100 62.0
SMO351G0406 Selaginella moellendorffii HOM05D006901 ORTHO05D008582 2.8e-21 105.9 83 67.5
CSS0012150 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 1.1e-20 104.0 133 48.9
Zm00001eb346910 Zea mays HOM05D006901 ORTHO05D008582 1.8e-20 103.2 96 60.4
DCAR_001194 Daucus carota HOM05D006901 ORTHO05D008582 2.0e-19 99.8 65 81.5
CBR_g54341 Chara braunii HOM05D006901 ORTHO05D008582 2.1e-16 89.7 82 57.3
CSS0007119 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 1.3e-13 80.5 114 47.4
CSS0023453 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 2.8e-13 79.3 87 54.0
MCO05G280 Micromonas commoda HOM05D006901 ORTHO05D008582 2.8e-13 79.3 81 51.9
Cre03.g176500 Chlamydomonas reinhardtii HOM05D006901 ORTHO05D008582 6.9e-12 74.7 93 49.5
Ah.08g214420 Amaranthus hybridus HOM05D006901 ORTHO05D008582 4.6e-08 62.0 81 50.6


User provided reference genes

Program Settings