Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr21g0305211 Lupinus albus HOM05D006494 ORTHO05D007787 5.4e-145 517.7 271 100.0
Lalb_Chr02g0144041 Lupinus albus HOM05D006494 ORTHO05D007787 1.3e-69 267.3 272 60.3
VMungo0720G0554 Vigna mungo HOM05D006494 ORTHO05D007787 2.0e-67 260.0 274 61.3
Phvul.007G073600 Phaseolus vulgaris HOM05D006494 ORTHO05D007787 9.1e-60 234.6 274 56.9
Glyma.10G231900 Glycine max HOM05D006494 ORTHO05D007787 3.5e-59 232.6 276 58.0
Glyma.20G162200 Glycine max HOM05D006494 ORTHO05D007787 4.5e-59 232.3 273 59.3
Ca_10732_v3 Cicer arietinum L. HOM05D006494 ORTHO05D007787 1.5e-57 227.3 274 55.8
Lj5g0022841 Lotus japonicus HOM05D006494 ORTHO05D007787 1.0e-55 221.1 266 57.1
TPR.G26961 Trifolium pratense HOM05D006494 ORTHO05D007787 2.8e-53 213.0 273 52.4
Psat0s2528g0040 Pisum sativum HOM05D006494 ORTHO05D007787 3.0e-42 176.4 281 43.4
arahy.Tifrunner.gnm1.ann1.HAQV4X Arachis hypogaea HOM05D006494 ORTHO05D007787 3.3e-41 172.9 273 48.0
arahy.Tifrunner.gnm1.ann1.J3K5XQ Arachis hypogaea HOM05D006494 ORTHO05D007787 3.6e-40 169.5 273 47.6
TWI39G0535 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 9.2e-28 128.3 285 36.5
Cfa016278 Carpinus fangiana HOM05D006494 ORTHO05D007787 2.1e-27 127.1 291 40.2
Haze_00032 Corylus avellana HOM05D006494 ORTHO05D007787 1.0e-26 124.8 292 39.7
Prupe.7G058200 Prunus persica HOM05D006494 ORTHO05D007787 1.5e-25 120.9 271 38.0
Ciclev10005709m.g Citrus clementina HOM05D006494 ORTHO05D007787 1.2e-24 117.9 283 37.8
TWI23G1164 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 2.1e-24 117.1 280 36.1
QL09p013118 Quercus lobata HOM05D006494 ORTHO05D007787 2.8e-24 116.7 283 39.9
Dinv28397 Davidia involucrata HOM05D006494 ORTHO05D007787 3.1e-23 113.2 278 37.4
Thecc.04G169800 Theobroma cacao HOM05D006494 ORTHO05D007787 8.9e-23 111.7 284 34.5
CiPaw.05G263300 Carya illinoinensis HOM05D006494 ORTHO05D007787 1.2e-22 111.3 257 37.4
Hma1.2p1_0327F.1_g126290 Hydrangea macrophylla HOM05D006494 ORTHO05D007787 1.2e-22 111.3 277 34.7
Duzib268G1872 Durio zibethinus HOM05D006494 ORTHO05D007787 3.4e-22 109.8 282 33.3
Gohir.A02G091800 Gossypium hirsutum HOM05D006494 ORTHO05D007787 9.9e-22 108.2 276 34.4
Gorai.005G124800 Gossypium raimondii HOM05D006494 ORTHO05D007787 4.9e-21 105.9 276 33.7
Duzib151G1204 Durio zibethinus HOM05D006494 ORTHO05D007787 1.1e-20 104.8 285 32.6
Gohir.D02G108900 Gossypium hirsutum HOM05D006494 ORTHO05D007787 1.1e-20 104.8 276 33.3
arahy.Tifrunner.gnm1.ann1.P4DBMR Arachis hypogaea HOM05D062081 ORTHO05D007787 1.4e-20 104.4 293 37.9
Manes.06G151500 Manihot esculenta HOM05D006494 ORTHO05D007787 1.9e-20 104.0 282 37.6
arahy.Tifrunner.gnm1.ann1.78PZ7R Arachis hypogaea HOM05D062081 ORTHO05D007787 5.4e-20 102.4 283 38.9
Gohir.A10G141700 Gossypium hirsutum HOM05D006494 ORTHO05D007787 5.4e-20 102.4 288 34.0
Gorai.011G137900 Gossypium raimondii HOM05D006494 ORTHO05D007787 5.4e-20 102.4 288 33.7
COL.COLO4_28030 Corchorus olitorius HOM05D006494 ORTHO05D007787 1.6e-19 100.9 281 34.9
MD14G1075900 Malus domestica HOM05D006494 ORTHO05D007787 2.1e-19 100.5 278 33.8
MD12G1079700 Malus domestica HOM05D006494 ORTHO05D007787 2.7e-19 100.1 277 33.6
Gohir.D10G124800 Gossypium hirsutum HOM05D006494 ORTHO05D007787 4.6e-19 99.4 288 33.3
COL.COLO4_10079 Corchorus olitorius HOM05D006494 ORTHO05D007787 1.0e-18 98.2 277 35.7
Cpa.g.sc107.95 Carica papaya HOM05D006494 ORTHO05D007787 1.7e-18 97.4 275 33.5
Eucgr.K00289 Eucalyptus grandis HOM05D006494 ORTHO05D007787 2.3e-18 97.1 281 34.9
vmacro09820 Vaccinium macrocarpon HOM05D006494 ORTHO05D007787 1.1e-17 94.7 290 31.7
TWI39G0536 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 3.3e-17 93.2 281 33.1
Lalb_Chr06g0164231 Lupinus albus HOM05D006494 ORTHO05D007787 4.3e-17 92.8 92 62.0
Thecc.03G182400 Theobroma cacao HOM05D006494 ORTHO05D007787 1.2e-16 91.3 282 35.1
MD07G1041300 Malus domestica HOM05D006494 ORTHO05D007787 2.8e-16 90.1 279 33.7
RcHm_v2.0_Chr3g0482351 Rosa chinensis HOM05D006494 ORTHO05D007787 2.8e-16 90.1 277 33.2
PGR142G1234 Punica granatum HOM05D006494 ORTHO05D007787 3.6e-16 89.7 290 33.4
RcHm_v2.0_Chr3g0482771 Rosa chinensis HOM05D006494 ORTHO05D007787 3.1e-15 86.7 279 33.7
SalBow2G1868 Salvia bowleyana HOM05D006494 ORTHO05D007787 3.1e-15 86.7 273 33.0
SalBow2G2185 Salvia bowleyana HOM05D006494 ORTHO05D007787 3.1e-15 86.7 273 33.0
MSTRG.8473 Avicennia marina HOM05D006494 ORTHO05D007787 1.2e-14 84.7 283 33.6
Migut.F01093 Erythranthe guttata HOM05D006494 ORTHO05D007787 1.5e-14 84.3 278 33.1
Actinidia20864 Actinidia chinensis HOM05D006494 ORTHO05D007787 2.0e-14 84.0 280 32.9
MELO3C018639.2 Cucumis melo HOM05D006494 ORTHO05D007787 4.4e-14 82.8 285 32.3
Rhsim09G0200100 Rhododendron simsii HOM05D006494 ORTHO05D007787 4.4e-14 82.8 282 31.2
ClCG05G008270 Citrullus lanatus HOM05D006494 ORTHO05D007787 7.6e-14 82.0 278 32.4
CsaV3_3G017370 Cucumis sativus L. HOM05D006494 ORTHO05D007787 2.2e-13 80.5 282 31.6
Prupe.7G043900 Prunus persica HOM05D006494 ORTHO05D007787 8.4e-13 78.6 205 35.1
Actinidia34147 Actinidia chinensis HOM05D006494 ORTHO05D007787 1.1e-12 78.2 229 35.8
PGSC0003DMG400010122 Solanum tuberosum HOM05D006494 ORTHO05D007787 1.1e-12 78.2 234 35.5
Manes.14G023400 Manihot esculenta HOM05D006494 ORTHO05D007787 1.4e-12 77.8 245 33.9
vmacro06639 Vaccinium macrocarpon HOM05D006494 ORTHO05D007787 5.4e-12 75.9 242 30.6
Nitab4.5_0000084g0320 Nicotiana tabacum HOM05D006494 ORTHO05D007787 1.6e-11 74.3 284 32.0
SGA_v2.0_scaffold10G05304 Striga asiatica HOM05D006494 ORTHO05D007787 1.6e-11 74.3 274 32.8
Sed0015630 Sechium edule HOM05D006494 ORTHO05D007787 2.1e-11 73.9 274 29.2
Cc02_g02520 Coffea canephora HOM05D006494 ORTHO05D007787 2.7e-11 73.6 224 31.7
FvH4_6g37300 Fragaria vesca HOM05D006494 ORTHO05D007787 3.5e-11 73.2 274 29.6
Ciclev10030388m.g Citrus clementina HOM05D006494 ORTHO05D007787 4.6e-11 72.8 286 30.4
FAN14G1471 Fragaria x ananassa HOM05D006494 ORTHO05D007787 4.6e-11 72.8 274 29.6
Solyc03g025160.4 Solanum lycopersicum HOM05D006494 ORTHO05D007787 6.0e-11 72.4 218 34.9
FAN05G4065 Fragaria x ananassa HOM05D006494 ORTHO05D007787 7.8e-11 72.0 274 29.2
Sopen03g004010 Solanum pennellii HOM05D006494 ORTHO05D007787 7.8e-11 72.0 234 34.6
FvH4_5g32440 Fragaria vesca HOM05D006494 ORTHO05D007787 1.0e-10 71.6 278 32.7
arahy.Tifrunner.gnm1.ann1.Q03G4Y Arachis hypogaea HOM05D059322 ORTHO05D007787 2.3e-10 70.5 235 34.5
FAN02G3807 Fragaria x ananassa HOM05D006494 ORTHO05D007787 2.3e-10 70.5 277 30.3
Potri.004G101600 Populus trichocarpa HOM05D006494 ORTHO05D007787 2.3e-10 70.5 121 38.8
Actinidia08572 Actinidia chinensis HOM05D006494 ORTHO05D007787 3.9e-10 69.7 200 31.5
FAN18G4076 Fragaria x ananassa HOM05D006494 ORTHO05D007787 3.9e-10 69.7 277 31.8
DCAR_020265 Daucus carota HOM05D006494 ORTHO05D007787 6.6e-10 68.9 201 31.3
arahy.Tifrunner.gnm1.ann1.GMZ10Y Arachis hypogaea HOM05D059322 ORTHO05D007787 8.7e-10 68.6 186 36.0
ECA232G1863 Erigeron canadensis HOM05D006494 ORTHO05D007787 1.9e-09 67.4 278 29.9
TAR629G2733 Trochodendron aralioides HOM05D006494 ORTHO05D007787 4.3e-09 66.2 287 30.3
Actinidia31832 Actinidia chinensis HOM05D006494 ORTHO05D007787 5.6e-09 65.9 161 32.9
Sed0010736 Sechium edule HOM05D006494 ORTHO05D007787 7.3e-09 65.5 277 29.6
Migut.F00309 Erythranthe guttata HOM05D006494 ORTHO05D007787 2.1e-08 63.9 276 29.7
TPR.G763 Trifolium pratense HOM05D006494 ORTHO05D007787 2.1e-08 63.9 65 60.0
FAN08G0782 Fragaria x ananassa HOM05D006494 ORTHO05D007787 3.6e-08 63.2 277 30.0
HanXRQChr09g0252471 Helianthus annuus HOM05D006494 ORTHO05D007787 3.6e-08 63.2 273 27.8
Potri.017G113501 Populus trichocarpa HOM05D006494 ORTHO05D007787 3.6e-08 63.2 141 35.5
Oeu022606.1 Olea europaea HOM05D006494 ORTHO05D007787 6.2e-08 62.4 218 33.0
FAN13G0811 Fragaria x ananassa HOM05D006494 ORTHO05D007787 1.4e-07 61.2 278 30.9
Rhsim03G0190000 Rhododendron simsii HOM05D006494 ORTHO05D007787 1.2e-06 58.2 194 31.4
PSO063G3044 Papaver somniferum HOM05D006494 ORTHO05D007787 2.6e-06 57.0 245 32.2
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 3.4e-06 56.6 248 27.4
unitig_46.g18800 Utricularia gibba HOM05D006494 ORTHO05D007787 3.4e-06 56.6 235 28.1
SHI13763 Sapria himalayana HOM05D000481 ORTHO05D003804 4.5e-06 56.2 218 31.2
Aa31LG3G14870 Aethionema arabicum HOM05D007739 ORTHO05D009838 5.8e-06 55.8 193 30.1
ECA232G4003 Erigeron canadensis HOM05D006494 ORTHO05D007787 7.6e-06 55.5 248 31.5
Thhalv10014740m.g Eutrema salsugineum HOM05D007739 ORTHO05D009838 9.9e-06 55.1 191 28.3
RcHm_v2.0_Chr3g0482721 Rosa chinensis HOM05D006494 ORTHO05D007787 9.9e-06 55.1 192 31.2


User provided reference genes

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