Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr21g0305161 Lupinus albus HOM05D005232 ORTHO05D006389 5.0e-57 224.2 110 100.0
Glyma.10G232300 Glycine max HOM05D005232 ORTHO05D006389 1.2e-50 203.0 112 89.3
Glyma.20G161800 Glycine max HOM05D005232 ORTHO05D006389 1.2e-50 203.0 112 89.3
arahy.Tifrunner.gnm1.ann1.IW4QJC Arachis hypogaea HOM05D005232 ORTHO05D006389 2.7e-50 201.8 111 89.2
arahy.Tifrunner.gnm1.ann1.JBBQ4L Arachis hypogaea HOM05D005232 ORTHO05D006389 2.7e-50 201.8 111 89.2
Lalb_Chr02g0141181 Lupinus albus HOM05D005232 ORTHO05D006389 5.9e-50 200.7 112 88.4
Ca_10736_v3 Cicer arietinum L. HOM05D005232 ORTHO05D006389 3.8e-49 198.0 112 86.6
VMungo0720G1404 Vigna mungo HOM05D005232 ORTHO05D006389 6.6e-49 197.2 112 86.6
RcHm_v2.0_Chr2g0116381 Rosa chinensis HOM05D005232 ORTHO05D006389 8.6e-49 196.8 112 86.6
TPR.G26976 Trifolium pratense HOM05D005232 ORTHO05D006389 3.3e-48 194.9 112 83.9
FAN26G0882 Fragaria x ananassa HOM05D005232 ORTHO05D006389 5.6e-48 194.1 112 85.7
FAN19G1688 Fragaria x ananassa HOM05D005232 ORTHO05D006389 7.3e-48 193.7 112 85.7
Potri.012G144400 Populus trichocarpa HOM05D005232 ORTHO05D006389 7.3e-48 193.7 109 86.2
CSS0049575 Camellia sinensis var. sinensis HOM05D005232 ORTHO05D006389 1.6e-47 192.6 109 83.5
Prupe.2G298500 Prunus persica HOM05D005232 ORTHO05D006389 2.1e-47 192.2 112 83.9
Eucgr.C03422 Eucalyptus grandis HOM05D005232 ORTHO05D006389 2.8e-47 191.8 112 85.7
Phvul.007G073300 Phaseolus vulgaris HOM05D005232 ORTHO05D006389 2.8e-47 191.8 112 84.8
QL09p013403 Quercus lobata HOM05D005232 ORTHO05D006389 2.8e-47 191.8 112 82.1
CiPaw.05G164300 Carya illinoinensis HOM05D005232 ORTHO05D006389 3.6e-47 191.4 112 82.1
MD07G1276200 Malus domestica HOM05D005232 ORTHO05D006389 4.7e-47 191.0 112 84.8
FAN23G0292 Fragaria x ananassa HOM05D005232 ORTHO05D006389 6.1e-47 190.7 112 84.8
FAN28G2294 Fragaria x ananassa HOM05D005232 ORTHO05D006389 6.1e-47 190.7 112 83.9
Lj5g0027810 Lotus japonicus HOM05D005232 ORTHO05D006389 6.1e-47 190.7 112 82.1
Actinidia22445 Actinidia chinensis HOM05D005232 ORTHO05D006389 8.0e-47 190.3 110 82.7
Lj8A722G14 Lonicera japonica HOM05D005232 ORTHO05D006389 8.0e-47 190.3 105 87.6
FvH4_1g22240 Fragaria vesca HOM05D005232 ORTHO05D006389 1.4e-46 189.5 112 83.9
Oeu014380.1 Olea europaea HOM05D005232 ORTHO05D006389 1.4e-46 189.5 112 82.1
Ciclev10004180m.g Citrus clementina HOM05D005232 ORTHO05D006389 3.0e-46 188.3 100 88.0
Psat6g193720 Pisum sativum HOM05D005232 ORTHO05D006389 4.0e-46 188.0 113 80.5
DCAR_006428 Daucus carota HOM05D005232 ORTHO05D006389 6.8e-46 187.2 112 81.2
Gorai.001G083900 Gossypium raimondii HOM05D005232 ORTHO05D006389 8.9e-46 186.8 112 81.2
Medtr1g100210 Medicago truncatula HOM05D005232 ORTHO05D006389 8.9e-46 186.8 112 81.2
Sabra15G0156100 Salix brachista HOM05D005232 ORTHO05D006389 8.9e-46 186.8 116 81.0
Sabra12G0108400 Salix brachista HOM05D005232 ORTHO05D006389 1.2e-45 186.4 108 82.4
GSVIVG01028893001 Vitis vinifera HOM05D005232 ORTHO05D006389 1.2e-45 186.4 112 79.5
ECA233G2984 Erigeron canadensis HOM05D005232 ORTHO05D006389 1.5e-45 186.0 112 82.1
Cc02_g11150 Coffea canephora HOM05D005232 ORTHO05D006389 2.0e-45 185.7 111 82.9
Gohir.D07G079300 Gossypium hirsutum HOM05D005232 ORTHO05D006389 2.0e-45 185.7 112 80.4
Ah.07g201890 Amaranthus hybridus HOM05D005232 ORTHO05D006389 2.6e-45 185.3 112 81.2
Nitab4.5_0013274g0010 Nicotiana tabacum HOM05D005232 ORTHO05D006389 3.4e-45 184.9 111 82.0
TAR375G0877 Trochodendron aralioides HOM05D005232 ORTHO05D006389 3.4e-45 184.9 109 78.0
vmacro22314 Vaccinium macrocarpon HOM05D005232 ORTHO05D006389 3.4e-45 184.9 104 84.6
Dinv28407 Davidia involucrata HOM05D005232 ORTHO05D006389 4.4e-45 184.5 112 78.6
Hund04775 Selenicereus undatus HOM05D005232 ORTHO05D006389 7.5e-45 183.7 112 80.4
Solyc05g056220.3 Solanum lycopersicum HOM05D005232 ORTHO05D006389 7.5e-45 183.7 109 79.8
TWI14G0968 Tripterygium wilfordii HOM05D005232 ORTHO05D006389 7.5e-45 183.7 105 83.8
PGSC0003DMG401023336 Solanum tuberosum HOM05D005232 ORTHO05D006389 9.8e-45 183.3 109 79.8
Thecc.08G165200 Theobroma cacao HOM05D005232 ORTHO05D006389 9.8e-45 183.3 112 79.5
MSTRG.8138 Avicennia marina HOM05D005232 ORTHO05D006389 1.3e-44 183.0 112 79.5
Gohir.A07G074600 Gossypium hirsutum HOM05D005232 ORTHO05D006389 1.7e-44 182.6 112 79.5
Nitab4.5_0007148g0020 Nicotiana tabacum HOM05D005232 ORTHO05D006389 1.7e-44 182.6 111 79.3
Atru.chr1.399 Acer truncatum HOM05D005232 ORTHO05D006389 2.2e-44 182.2 112 78.6
PGR102G0407 Punica granatum HOM05D005232 ORTHO05D006389 2.2e-44 182.2 93 91.4
unitig_736.g22333 Utricularia gibba HOM05D005232 ORTHO05D006389 2.2e-44 182.2 104 80.8
Carub.0006s2852 Capsella rubella HOM05D005232 ORTHO05D006389 2.9e-44 181.8 109 79.8
A09p28930 Brassica napus HOM05D005232 ORTHO05D006389 4.9e-44 181.0 109 78.0
BraA09t38457Z Brassica rapa HOM05D005232 ORTHO05D006389 4.9e-44 181.0 109 78.0
SalBow7G4258 Salvia bowleyana HOM05D005232 ORTHO05D006389 4.9e-44 181.0 105 80.0
Migut.F01728 Erythranthe guttata HOM05D005232 ORTHO05D006389 6.4e-44 180.6 113 77.9
HanXRQChr08g0218691 Helianthus annuus HOM05D005232 ORTHO05D006389 6.4e-44 180.6 107 80.4
Thhalv10028402m.g Eutrema salsugineum HOM05D005232 ORTHO05D006389 8.3e-44 180.3 109 78.0
Rhsim03G0189000 Rhododendron simsii HOM05D005232 ORTHO05D006389 8.3e-44 180.3 104 81.7
RhsimUnG0027300 Rhododendron simsii HOM05D005232 ORTHO05D006389 8.3e-44 180.3 104 81.7
BcaB01g01438 Brassica carinata HOM05D005232 ORTHO05D006389 1.1e-43 179.9 109 77.1
BcaC04g21005 Brassica carinata HOM05D005232 ORTHO05D006389 1.1e-43 179.9 109 77.1
C09p36730 Brassica napus HOM05D005232 ORTHO05D006389 1.1e-43 179.9 109 77.1
BolC9t56504H Brassica oleracea HOM05D005232 ORTHO05D006389 1.1e-43 179.9 109 77.1
CAN.G694.95 Capsicum annuum HOM05D005232 ORTHO05D006389 1.1e-43 179.9 95 86.3
Cfa016269 Carpinus fangiana HOM05D005232 ORTHO05D006389 1.1e-43 179.9 92 88.0
TWI39G1086 Tripterygium wilfordii HOM05D005232 ORTHO05D006389 1.1e-43 179.9 108 80.6
Aa31LG9G12010 Aethionema arabicum HOM05D005232 ORTHO05D006389 1.4e-43 179.5 109 77.1
Haze_00026 Corylus avellana HOM05D005232 ORTHO05D006389 1.4e-43 179.5 92 87.0
Potri.015G147200 Populus trichocarpa HOM05D005232 ORTHO05D006389 1.4e-43 179.5 110 80.9
MSTRG.380 Avicennia marina HOM05D005232 ORTHO05D006389 1.8e-43 179.1 109 78.0
AT4G09980 Arabidopsis thaliana HOM05D005232 ORTHO05D006389 3.2e-43 178.3 109 78.9
CARHR260960 Cardamine hirsuta HOM05D005232 ORTHO05D006389 4.1e-43 177.9 109 78.0
SGA_v2.0_scaffold51G18697 Striga asiatica HOM05D005232 ORTHO05D006389 4.1e-43 177.9 93 86.0
TPR.G22241 Trifolium pratense HOM05D005232 ORTHO05D006389 5.4e-43 177.6 92 88.0
CsaV3_4G004180 Cucumis sativus L. HOM05D005232 ORTHO05D006389 7.0e-43 177.2 108 79.6
Aqoxy7G00280 Aquilegia oxysepala HOM05D005232 ORTHO05D006389 1.2e-42 176.4 110 76.4
AL6G43680 Arabidopsis lyrata HOM05D005232 ORTHO05D006389 1.6e-42 176.0 109 78.0
Oeu041197.1 Olea europaea HOM05D005232 ORTHO05D006389 1.6e-42 176.0 93 88.2
Hund11728 Selenicereus undatus HOM05D005232 ORTHO05D006389 1.6e-42 176.0 103 81.6
Sopen05g034610 Solanum pennellii HOM05D005232 ORTHO05D006389 2.0e-42 175.6 94 85.1
Manes.14G024000 Manihot esculenta HOM05D005232 ORTHO05D006389 4.6e-42 174.5 91 85.7
Nn1g01560 Nelumbo nucifera HOM05D005232 ORTHO05D006389 6.0e-42 174.1 110 73.6
Peaxi162Scf00858g00214 Petunia axillaris HOM05D005232 ORTHO05D006389 6.0e-42 174.1 92 84.8
THA.LOC104811969 Tarenaya hassleriana HOM05D005232 ORTHO05D006389 6.0e-42 174.1 91 87.9
TAR629G2045 Trochodendron aralioides HOM05D005232 ORTHO05D006389 7.8e-42 173.7 109 76.1
AUR62021146 Chenopodium quinoa HOM05D005232 ORTHO05D006389 1.3e-41 172.9 92 84.8
AUR62031391 Chenopodium quinoa HOM05D005232 ORTHO05D006389 1.3e-41 172.9 92 84.8
ClCG07G016960 Citrullus lanatus HOM05D005232 ORTHO05D006389 1.3e-41 172.9 91 89.0
Nitab4.5_0009827g0020 Nicotiana tabacum HOM05D005232 ORTHO05D006389 1.7e-41 172.6 91 85.7
Sp6g07330 Schrenkiella parvula HOM05D005232 ORTHO05D006389 1.7e-41 172.6 91 85.7
Duzib170G0925 Durio zibethinus HOM05D005232 ORTHO05D006389 2.3e-41 172.2 90 86.7
PSO170G2956 Papaver somniferum HOM05D005232 ORTHO05D006389 3.0e-41 171.8 109 74.3
CAN.G694.94 Capsicum annuum HOM05D005232 ORTHO05D006389 3.9e-41 171.4 91 85.7
Hma1.2p1_2038F.1_g312080 Hydrangea macrophylla HOM05D005232 ORTHO05D006389 8.6e-41 170.2 112 75.9
PSO528G0151 Papaver somniferum HOM05D005232 ORTHO05D006389 8.6e-41 170.2 109 73.4
EL10Ac3g05588 Beta vulgaris HOM05D005232 ORTHO05D006389 1.1e-40 169.9 91 84.6
Sopen05g034600 Solanum pennellii HOM05D005232 ORTHO05D006389 1.5e-40 169.5 91 83.5
PGSC0003DMG402023336 Solanum tuberosum HOM05D005232 ORTHO05D006389 1.5e-40 169.5 91 83.5
Rhsim09G0150800 Rhododendron simsii HOM05D005232 ORTHO05D006389 1.9e-40 169.1 103 78.6
SEGI_16406 Sequoiadendron giganteum HOM05D005232 ORTHO05D006389 2.5e-40 168.7 100 78.0
Os01g0267100 Oryza sativa ssp. japonica HOM05D005232 ORTHO05D006389 5.6e-40 167.5 87 88.5
Nitab4.5_0000582g0120 Nicotiana tabacum HOM05D005232 ORTHO05D006389 2.1e-39 165.6 97 80.4
HPP92_018498 Vanilla planifolia HOM05D005232 ORTHO05D006389 2.8e-39 165.2 97 78.4
ATR0618G373 Amborella trichopoda HOM05D005232 ORTHO05D006389 4.7e-39 164.5 87 85.1
Sed0005714 Sechium edule HOM05D005232 ORTHO05D006389 3.1e-38 161.8 91 84.6
Zm00001eb003840 Zea mays HOM05D005232 ORTHO05D006389 2.9e-36 155.2 114 68.4
Actinidia06757 Actinidia chinensis HOM05D005232 ORTHO05D006389 4.9e-36 154.5 91 81.3
Lsat_1_v5_gn_8_20461 Lactuca sativa HOM05D005232 ORTHO05D006389 4.9e-36 154.5 132 60.6
CDE11G0704 Ceratophyllum demersum HOM05D005232 ORTHO05D006389 8.3e-36 153.7 87 79.3
Os10g0447600 Oryza sativa ssp. japonica HOM05D005232 ORTHO05D006389 9.2e-35 150.2 86 80.2
MELO3C017648.2 Cucumis melo HOM05D005232 ORTHO05D006389 1.2e-34 149.8 140 58.6
vmacro04863 Vaccinium macrocarpon HOM05D005232 ORTHO05D006389 2.1e-34 149.1 143 57.3
CDE05G3165 Ceratophyllum demersum HOM05D005232 ORTHO05D006389 1.7e-33 146.0 86 76.7
Mapoly0005s0162 Marchantia polymorpha HOM05D005232 ORTHO05D006389 6.8e-30 134.0 87 72.4
CBR_g46618 Chara braunii HOM05D005232 ORTHO05D006389 5.8e-29 131.0 87 70.1
Pp3c5_5900 Physcomitrium patens HOM05D005232 ORTHO05D006389 1.3e-28 129.8 112 60.7
Pp3c6_26980 Physcomitrium patens HOM05D005232 ORTHO05D006389 7.1e-27 124.0 94 63.8
Cre01.g050600 Chlamydomonas reinhardtii HOM05D005232 ORTHO05D006389 4.7e-23 111.3 88 63.6
Cpa.g.sc42.154 Carica papaya HOM05D005232 ORTHO05D006389 4.9e-20 101.3 50 90.0
CSS0011841 Camellia sinensis var. sinensis HOM05D005232 ORTHO05D006389 3.6e-15 85.1 43 88.4
Dinv13548 Davidia involucrata HOM05D005232 ORTHO05D006389 3.6e-15 85.1 43 90.7
SEGI_30084 Sequoiadendron giganteum HOM05D005232 ORTHO05D006389 4.0e-06 55.1 51 45.1


User provided reference genes

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