Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr21g0305131 Lupinus albus HOM05D003626 ORTHO05D004255 6.6e-249 863.6 445 100.0
Lalb_Chr06g0161221 Lupinus albus HOM05D003626 ORTHO05D004255 2.6e-173 612.5 475 71.8
Glyma.10G233400 Glycine max HOM05D003626 ORTHO05D004255 1.9e-123 446.8 480 56.5
Lalb_Chr02g0141141 Lupinus albus HOM05D003626 ORTHO05D004255 3.8e-119 432.6 420 61.9
Phvul.007G072400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 7.1e-118 428.3 477 55.3
Glyma.20G161000 Glycine max HOM05D003626 ORTHO05D004255 3.0e-116 422.9 479 54.3
Psat6g197120 Pisum sativum HOM05D003626 ORTHO05D004255 1.3e-114 417.5 499 52.9
VMungo0720G1546 Vigna mungo HOM05D003626 ORTHO05D004255 1.1e-113 414.5 481 53.2
arahy.Tifrunner.gnm1.ann1.DJI5YQ Arachis hypogaea HOM05D003626 ORTHO05D004255 1.2e-112 411.0 482 54.1
arahy.Tifrunner.gnm1.ann1.TX8CZR Arachis hypogaea HOM05D003626 ORTHO05D004255 1.5e-112 410.6 482 54.4
TPR.G26995 Trifolium pratense HOM05D003626 ORTHO05D004255 4.4e-112 409.1 498 51.8
Lalb_Chr03g0034731 Lupinus albus HOM05D003626 ORTHO05D004255 1.3e-106 391.0 482 51.0
Medtr1g100810 Medicago truncatula HOM05D003626 ORTHO05D004255 1.8e-100 370.5 501 49.1
Glyma.16G181700 Glycine max HOM05D003626 ORTHO05D004255 5.1e-100 369.0 480 50.2
Ca_10741_v3 Cicer arietinum L. HOM05D003626 ORTHO05D004255 2.1e-98 363.6 501 48.5
Lalb_Chr19g0130741 Lupinus albus HOM05D003626 ORTHO05D004255 1.3e-95 354.4 481 48.6
arahy.Tifrunner.gnm1.ann1.26FV7C Arachis hypogaea HOM05D003626 ORTHO05D004255 1.0e-92 344.7 480 47.3
Lj5g0006318 Lotus japonicus HOM05D003626 ORTHO05D004255 6.2e-90 335.5 559 43.1
arahy.Tifrunner.gnm1.ann1.7Y9ZSE Arachis hypogaea HOM05D003626 ORTHO05D004255 3.1e-89 333.2 480 46.7
Lj2g0008392 Lotus japonicus HOM05D003626 ORTHO05D004255 6.5e-87 325.5 480 44.0
Phvul.004G113400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 1.8e-76 290.8 477 43.4
Manes.06G149800 Manihot esculenta HOM05D003626 ORTHO05D004255 1.2e-72 278.1 502 40.4
Actinidia25889 Actinidia chinensis HOM05D003626 ORTHO05D000962 1.0e-71 275.0 503 41.4
Cfa016262 Carpinus fangiana HOM05D003626 ORTHO05D004255 1.0e-71 275.0 500 41.0
Prupe.2G297500 Prunus persica HOM05D003626 ORTHO05D004255 1.2e-69 268.1 498 41.8
Potri.015G146300 Populus trichocarpa HOM05D003626 ORTHO05D004255 3.9e-68 263.1 496 39.5
Manes.14G024700 Manihot esculenta HOM05D003626 ORTHO05D004255 2.0e-67 260.8 502 40.0
RcHm_v2.0_Chr1g0377821 Rosa chinensis HOM05D003626 ORTHO05D004255 6.3e-66 255.8 492 42.1
Medtr6g053660 Medicago truncatula HOM05D003626 ORTHO05D004255 1.1e-65 255.0 507 40.6
TWI23G0117 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 1.1e-65 255.0 497 41.0
Haze_00014 Corylus avellana HOM05D003626 ORTHO05D004255 3.1e-65 253.4 543 37.4
Dinv28414 Davidia involucrata HOM05D003626 ORTHO05D004255 2.6e-64 250.4 429 43.1
Potri.012G143200 Populus trichocarpa HOM05D003626 ORTHO05D004255 3.5e-64 250.0 485 38.6
Cpa.g.sc107.76 Carica papaya HOM05D003626 ORTHO05D004255 4.5e-64 249.6 508 40.2
Atru.chr1.420 Acer truncatum HOM05D003626 ORTHO05D004255 1.7e-63 247.7 504 39.1
Duzib205G1576 Durio zibethinus HOM05D003626 ORTHO05D004255 1.9e-62 244.2 462 41.1
COL.COLO4_28044 Corchorus olitorius HOM05D003626 ORTHO05D004255 2.5e-62 243.8 497 39.0
GSVIVG01028908001 Vitis vinifera HOM05D003626 ORTHO05D004255 1.2e-61 241.5 502 39.4
TWI14G0197 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 1.6e-61 241.1 491 39.5
MD07G1273500 Malus domestica HOM05D003626 ORTHO05D004255 8.0e-61 238.8 505 40.2
Ca_13872_v3 Cicer arietinum L. HOM05D003626 ORTHO05D004255 1.0e-60 238.4 439 41.2
vmacro06655 Vaccinium macrocarpon HOM05D003626 ORTHO05D004255 3.0e-60 236.9 503 38.0
Gohir.A12G256000 Gossypium hirsutum HOM05D003626 ORTHO05D004255 2.0e-59 234.2 499 38.1
Gorai.008G275600 Gossypium raimondii HOM05D003626 ORTHO05D004255 3.3e-59 233.4 502 37.8
TWI39G1025 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 4.4e-59 233.0 493 40.2
Rhsim03G0188200 Rhododendron simsii HOM05D003626 ORTHO05D004255 5.7e-59 232.6 493 38.7
Thecc.03G180000 Theobroma cacao HOM05D003626 ORTHO05D004255 5.7e-59 232.6 495 37.4
TAR636G1367 Trochodendron aralioides HOM05D003626 ORTHO05D004255 1.3e-58 231.5 533 38.3
Gohir.D08G110300 Gossypium hirsutum HOM05D003626 ORTHO05D004255 4.8e-58 229.6 460 37.6
Hma1.2p1_0227F.1_g095920 Hydrangea macrophylla HOM05D003626 ORTHO05D004255 8.2e-58 228.8 500 39.0
Psat0s4127g0040 Pisum sativum HOM05D003626 ORTHO05D004255 8.2e-58 228.8 482 38.4
FAN03G0953 Fragaria x ananassa HOM05D003626 ORTHO05D004255 2.4e-57 227.3 487 39.4
Duzib084G0771 Durio zibethinus HOM05D003626 ORTHO05D004255 4.1e-57 226.5 496 38.1
TPR.G8172 Trifolium pratense HOM05D003626 ORTHO05D004255 5.3e-57 226.1 535 36.6
Gohir.A08G098700 Gossypium hirsutum HOM05D003626 ORTHO05D004255 1.2e-56 224.9 466 39.3
Gohir.D12G257400 Gossypium hirsutum HOM05D003626 ORTHO05D004255 1.0e-55 221.9 509 37.1
CsaV3_3G017260 Cucumis sativus L. HOM05D003626 ORTHO05D004255 1.7e-55 221.1 511 37.0
Gorai.004G117900 Gossypium raimondii HOM05D003626 ORTHO05D004255 2.9e-55 220.3 494 36.4
MELO3C006924.2 Cucumis melo HOM05D003626 ORTHO05D004255 3.8e-55 219.9 502 37.8
TAR629G0048 Trochodendron aralioides HOM05D003626 ORTHO05D004255 2.7e-53 213.8 495 38.6
FvH4_7g29860 Fragaria vesca HOM05D003626 ORTHO05D004255 3.6e-53 213.4 486 38.1
MD01G1205100 Malus domestica HOM05D003626 ORTHO05D004255 3.6e-53 213.4 498 38.0
Duzib068G0520 Durio zibethinus HOM05D003626 ORTHO05D004255 2.3e-52 210.7 485 37.3
Sed0000543 Sechium edule HOM05D003626 ORTHO05D004255 5.2e-52 209.5 506 37.5
Lj1C1001T6 Lonicera japonica HOM05D003626 ORTHO05D004255 8.8e-52 208.8 519 35.1
Oeu004107.1 Olea europaea HOM05D003626 ORTHO05D004255 7.5e-51 205.7 489 36.0
Peaxi162Scf00444g00425 Petunia axillaris HOM05D003626 ORTHO05D004255 7.5e-51 205.7 499 37.1
Sabra15G0155500 Salix brachista HOM05D003626 ORTHO05D004255 1.7e-50 204.5 489 36.6
PSO478G3353 Papaver somniferum HOM05D003626 ORTHO05D004255 3.7e-50 203.4 503 36.0
CiPaw.05G264100 Carya illinoinensis HOM05D003626 ORTHO05D004255 8.3e-50 202.2 403 40.9
EL10Ac3g05599 Beta vulgaris HOM05D003626 ORTHO05D004255 2.4e-49 200.7 493 37.5
Ciclev10006582m.g Citrus clementina HOM05D003626 ORTHO05D004255 2.4e-49 200.7 397 40.3
Dinv35227 Davidia involucrata HOM05D003626 ORTHO05D004255 9.1e-49 198.7 378 41.5
CSS0005394 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 7.7e-48 195.7 417 36.9
Sabra12G0107600 Salix brachista HOM05D003626 ORTHO05D004255 1.1e-46 191.8 453 35.5
FAN10G0313 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.5e-46 191.4 483 36.2
Nn6g33408 Nelumbo nucifera HOM05D003626 ORTHO05D004255 1.5e-46 191.4 509 35.6
Solyc03g025440.3 Solanum lycopersicum HOM05D003626 ORTHO05D004255 1.5e-46 191.4 498 37.1
Nitab4.5_0000084g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 1.9e-46 191.0 494 35.4
PSO782G4415 Papaver somniferum HOM05D003626 ORTHO05D004255 1.9e-46 191.0 504 34.7
Sopen03g004280 Solanum pennellii HOM05D003626 ORTHO05D004255 1.9e-46 191.0 498 37.3
FAN10G2476 Fragaria x ananassa HOM05D003626 ORTHO05D004255 3.2e-46 190.3 483 36.0
PGSC0003DMG400015791 Solanum tuberosum HOM05D003626 ORTHO05D004255 1.2e-45 188.3 492 36.0
FAN03G3125 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.6e-45 188.0 487 36.3
FAN01G0376 Fragaria x ananassa HOM05D003626 ORTHO05D004255 3.6e-45 186.8 488 35.9
Sc19g0001390 Simmondsia chinensis HOM05D003626 ORTHO05D004255 3.6e-45 186.8 494 35.0
PGR042G2663 Punica granatum HOM05D003626 ORTHO05D004255 4.7e-45 186.4 490 35.9
AUR62015951 Chenopodium quinoa HOM05D003626 ORTHO05D004255 8.0e-45 185.7 508 35.4
Nitab4.5_0000080g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 1.2e-43 181.8 471 37.4
Nitab4.5_0004439g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 1.5e-43 181.4 494 35.4
Nn1g01542 Nelumbo nucifera HOM05D003626 ORTHO05D004255 2.6e-43 180.6 507 33.9
DCAR_020260 Daucus carota HOM05D003626 ORTHO05D004255 1.3e-42 178.3 491 34.2
Nitab4.5_0001951g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 2.2e-42 177.6 492 37.0
Cc02_g02700 Coffea canephora HOM05D003626 ORTHO05D004255 6.3e-42 176.0 494 36.0
Hund04768 Selenicereus undatus HOM05D003626 ORTHO05D004255 3.1e-41 173.7 483 34.2
ClCG05G008170 Citrullus lanatus HOM05D003626 ORTHO05D004255 7.0e-41 172.6 611 31.1
CAN.G1175.16 Capsicum annuum HOM05D003626 ORTHO05D004255 9.1e-41 172.2 568 32.4
FAN06G2167 Fragaria x ananassa HOM05D003626 ORTHO05D004255 9.1e-41 172.2 326 41.4
CANSAT21G2257 Cannabis sativa HOM05D003626 ORTHO05D004255 2.0e-40 171.0 488 36.9
Aqoxy7G00296 Aquilegia oxysepala HOM05D003626 ORTHO05D004255 2.7e-40 170.6 509 32.6
Lsat_1_v5_gn_9_55160 Lactuca sativa HOM05D003626 ORTHO05D004255 1.2e-37 161.8 473 34.7
Sed0014313 Sechium edule HOM05D003626 ORTHO05D004255 1.6e-37 161.4 506 34.2
FAN06G1666 Fragaria x ananassa HOM05D003626 ORTHO05D004255 6.1e-37 159.5 460 34.1
SalBow4G0890 Salvia bowleyana HOM05D003626 ORTHO05D004255 3.0e-36 157.1 487 34.9
ECA233G2749 Erigeron canadensis HOM05D003626 ORTHO05D004255 4.0e-36 156.8 439 35.1
AUR62021157 Chenopodium quinoa HOM05D003626 ORTHO05D004255 3.2e-33 147.1 505 32.9
CDE02G1538 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 2.7e-32 144.1 479 31.5
DCAR_029574 Daucus carota HOM05D003626 ORTHO05D004255 3.9e-31 140.2 525 28.8
HanXRQChr14g0462361 Helianthus annuus HOM05D003626 ORTHO05D004255 6.6e-31 139.4 461 31.2
Oeu061653.1 Olea europaea HOM05D003626 ORTHO05D004255 3.3e-30 137.1 423 33.8
Ah.07g206910 Amaranthus hybridus HOM05D003626 ORTHO05D004255 1.0e-28 132.1 494 30.6
Migut.F00325 Erythranthe guttata HOM05D003626 ORTHO05D004255 1.4e-28 131.7 490 31.0
MSTRG.27103 Avicennia marina HOM05D003626 ORTHO05D004255 8.9e-28 129.0 485 30.1
ECA238G3668 Erigeron canadensis HOM05D003626 ORTHO05D004255 2.0e-27 127.9 555 30.3
Solyc06g036060.4 Solanum lycopersicum HOM05D003626 ORTHO05D004255 2.2e-26 124.4 456 30.9
A03p56130 Brassica napus HOM05D003626 ORTHO05D004255 1.4e-25 121.7 466 30.5
C07p54460 Brassica napus HOM05D003626 ORTHO05D004255 2.4e-25 120.9 471 31.2
A01p16870 Brassica napus HOM05D003626 ORTHO05D004255 3.2e-25 120.6 468 30.3
C01p21150 Brassica napus HOM05D003626 ORTHO05D004255 5.4e-25 119.8 469 31.1
PGR142G2556 Punica granatum HOM05D003626 ORTHO05D004255 7.0e-25 119.4 497 29.6
SGA_v2.0_scaffold60G21078 Striga asiatica HOM05D003626 ORTHO05D004255 1.3e-23 115.2 482 30.7
BolC7t45931H Brassica oleracea HOM05D003626 ORTHO05D004255 3.0e-23 114.0 466 29.8
BraA03t14686Z Brassica rapa HOM05D003626 ORTHO05D004255 3.0e-23 114.0 468 28.8
MSTRG.82 Avicennia marina HOM05D003626 ORTHO05D004255 3.9e-23 113.6 418 31.6
MBI18_g29423_MAGBIO Magnolia biondii HOM05D003626 ORTHO05D004255 3.9e-23 113.6 289 34.6
BcaC06g32796 Brassica carinata HOM05D003626 ORTHO05D004255 3.6e-21 107.1 467 27.6
BcaC09g50754 Brassica carinata HOM05D003626 ORTHO05D004255 1.1e-20 105.5 470 28.9
THA.LOC104825103 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 1.1e-20 105.5 416 30.0
THA.LOC104811971 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 4.4e-19 100.1 410 28.5
CDE06G1616 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 8.3e-18 95.9 448 26.6
MBI17_g24687_MAGBIO Magnolia biondii HOM05D003626 ORTHO05D004255 1.9e-17 94.7 435 30.6
Zm00001eb095880 Zea mays HOM05D003626 ORTHO05D004255 1.9e-17 94.7 403 28.5
AT4G25610 Arabidopsis thaliana HOM05D003626 ORTHO05D004255 9.2e-17 92.4 464 28.0
unitig_0.g459 Utricularia gibba HOM05D003626 ORTHO05D004255 1.2e-16 92.0 412 27.4
Carub.0007s1537 Capsella rubella HOM05D003626 ORTHO05D004255 1.6e-16 91.7 456 25.9
ATR0680G428 Amborella trichopoda HOM05D003626 ORTHO05D004255 4.6e-16 90.1 208 39.4
VMungo0464G2114 Vigna mungo HOM05D003626 ORTHO05D002946 6.0e-16 89.7 520 24.6
CARHR233030 Cardamine hirsuta HOM05D003626 ORTHO05D004255 7.8e-16 89.4 470 28.1
Glyma.09G136202 Glycine max HOM05D003626 ORTHO05D004255 1.0e-15 89.0 74 71.6
TAR375G0013 Trochodendron aralioides HOM05D003626 ORTHO05D004255 1.0e-15 89.0 138 48.6
Os09g0570200 Oryza sativa ssp. japonica HOM05D003626 ORTHO05D004255 1.3e-15 88.6 402 28.1
HPP92_001476 Vanilla planifolia HOM05D003626 ORTHO05D004255 1.7e-15 88.2 85 63.5
Sopen06g011810 Solanum pennellii HOM05D003626 ORTHO05D004255 2.3e-15 87.8 86 59.3
Sp7g23640 Schrenkiella parvula HOM05D003626 ORTHO05D004255 3.0e-15 87.4 467 26.8
Thhalv10024755m.g Eutrema salsugineum HOM05D003626 ORTHO05D004255 3.9e-15 87.0 470 27.4
Peaxi162Scf00848g00116 Petunia axillaris HOM05D003626 ORTHO05D004255 1.1e-14 85.5 109 52.3
BcaNung03703 Brassica carinata HOM05D003626 ORTHO05D004255 4.3e-14 83.6 468 26.3
CSS0037833 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 9.5e-14 82.4 62 74.2
HPP92_011473 Vanilla planifolia HOM05D003626 ORTHO05D004255 1.2e-13 82.0 85 62.4
Zm00001eb224460 Zea mays HOM05D003626 ORTHO05D004255 6.2e-13 79.7 95 50.5
AL7G27480 Arabidopsis lyrata HOM05D003626 ORTHO05D004255 1.1e-12 79.0 470 24.3
TAR375G0736 Trochodendron aralioides HOM05D003626 ORTHO05D004255 1.1e-12 79.0 114 43.0
Eucgr.A02765 Eucalyptus grandis HOM05D003626 ORTHO05D004255 1.4e-12 78.6 83 60.2
Eucgr.E00978 Eucalyptus grandis HOM05D003626 ORTHO05D004255 1.4e-12 78.6 83 60.2
Eucgr.L00411 Eucalyptus grandis HOM05D003626 ORTHO05D004255 1.4e-12 78.6 83 60.2
Aa31LG3G8800 Aethionema arabicum HOM05D003626 ORTHO05D004255 2.6e-11 74.3 484 26.9
unitig_22.g5223 Utricularia gibba HOM05D003626 ORTHO05D004255 2.6e-11 74.3 91 52.7
PGSC0003DMG400029919 Solanum tuberosum HOM05D003626 ORTHO05D004255 2.9e-10 70.9 426 28.4
SEGI_03018 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 6.4e-10 69.7 68 58.8
SEGI_20458 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 6.4e-10 69.7 68 58.8
Migut.F01102 Erythranthe guttata HOM05D003626 ORTHO05D004255 8.4e-10 69.3 422 28.4
Mapoly0003s0245 Marchantia polymorpha HOM05D003626 ORTHO05D004255 2.3e-07 61.2 78 50.0
SMO347G0135 Selaginella moellendorffii HOM05D003626 ORTHO05D004255 3.0e-07 60.8 472 24.6
Sc13g0008850 Simmondsia chinensis HOM05D003626 ORTHO05D004255 1.1e-06 58.9 92 44.6
FAN06G0571 Fragaria x ananassa HOM05D003626 ORTHO05D004255 3.3e-06 57.4 118 42.4


User provided reference genes

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