Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr21g0305111 Lupinus albus HOM05D008240 ORTHO05D010333 1.5e-26 122.1 60 100.0
Glyma.12G005800 Glycine max HOM05D008240 ORTHO05D010333 2.3e-19 98.2 57 84.2
VMungo1127G0785 Vigna mungo HOM05D008240 ORTHO05D010333 2.3e-19 98.2 56 82.1
Phvul.011G006600 Phaseolus vulgaris HOM05D008240 ORTHO05D010333 3.0e-19 97.8 56 82.1
Prupe.2G297100 Prunus persica HOM05D008240 ORTHO05D010333 1.5e-18 95.5 58 77.6
Medtr1g100890 Medicago truncatula HOM05D008240 ORTHO05D010333 2.5e-18 94.7 56 80.4
Haze_00010 Corylus avellana HOM05D008240 ORTHO05D010333 5.6e-18 93.6 56 80.4
Psat6g197280 Pisum sativum HOM05D008240 ORTHO05D010333 1.2e-17 92.4 56 78.6
arahy.Tifrunner.gnm1.ann1.ES0TVM Arachis hypogaea HOM05D008240 ORTHO05D010333 4.7e-17 90.5 56 71.4
FvH4_7g29780 Fragaria vesca HOM05D008240 ORTHO05D010333 4.7e-17 90.5 60 73.3
RcHm_v2.0_Chr1g0377781 Rosa chinensis HOM05D008240 ORTHO05D010333 6.2e-17 90.1 58 74.1
TPR.G27012 Trifolium pratense HOM05D008240 ORTHO05D010333 6.2e-17 90.1 56 76.8
Atru.chr1.425 Acer truncatum HOM05D008240 ORTHO05D010333 1.1e-16 89.4 50 86.0
arahy.Tifrunner.gnm1.ann1.MUHC0Z Arachis hypogaea HOM05D002671 ORTHO05D010333 1.1e-16 89.4 54 72.2
Dinv28418 Davidia involucrata HOM05D008240 ORTHO05D002863 1.4e-16 89.0 57 75.4
Sabra01G0148200 Salix brachista HOM05D008240 ORTHO05D010333 1.4e-16 89.0 50 80.0
Thecc.03G179600 Theobroma cacao HOM05D008240 ORTHO05D010333 1.8e-16 88.6 56 80.4
Manes.14G024900 Manihot esculenta HOM05D008240 ORTHO05D010333 2.3e-16 88.2 56 76.8
Potri.001G178400 Populus trichocarpa HOM05D008240 ORTHO05D010333 2.3e-16 88.2 53 77.4
Glyma.09G230900 Glycine max HOM05D008240 ORTHO05D010333 3.1e-16 87.8 57 77.2
Cpa.g.sc107.72 Carica papaya HOM05D008240 ORTHO05D010333 4.0e-16 87.4 52 76.9
Actinidia34129 Actinidia chinensis HOM05D000206 ORTHO05D002863 8.9e-16 86.3 60 70.0
Gorai.008G276000 Gossypium raimondii HOM05D008240 ORTHO05D010333 8.9e-16 86.3 46 84.8
Hma1.2p1_0227F.1_g095850 Hydrangea macrophylla HOM05D008240 ORTHO05D010333 8.9e-16 86.3 51 82.4
Sc13g0008860 Simmondsia chinensis HOM05D008240 ORTHO05D010333 8.9e-16 86.3 56 73.2
Manes.06G149600 Manihot esculenta HOM05D008240 ORTHO05D010333 1.2e-15 85.9 50 78.0
CSS0023725 Camellia sinensis var. sinensis HOM05D008240 ORTHO05D010333 1.5e-15 85.5 53 77.4
COL.COLO4_03572 Corchorus olitorius HOM05D008240 ORTHO05D010333 2.6e-15 84.7 45 86.7
COL.COLO4_28004 Corchorus olitorius HOM05D008240 ORTHO05D010333 2.6e-15 84.7 45 86.7
Gohir.A12G256400 Gossypium hirsutum HOM05D008240 ORTHO05D010333 3.4e-15 84.3 46 84.8
Gohir.D12G257700 Gossypium hirsutum HOM05D008240 ORTHO05D010333 3.4e-15 84.3 46 84.8
CiPaw.06G002300 Carya illinoinensis HOM05D008240 ORTHO05D010333 5.8e-15 83.6 56 75.0
Ciclev10006392m.g Citrus clementina HOM05D008240 ORTHO05D010333 5.8e-15 83.6 54 72.2
ClCG10G005770 Citrullus lanatus HOM05D008240 ORTHO05D010333 7.5e-15 83.2 56 69.6
vmacro06659 Vaccinium macrocarpon HOM05D000206 ORTHO05D002863 9.8e-15 82.8 57 71.9
AUR62021162 Chenopodium quinoa HOM05D008240 ORTHO05D010333 1.3e-14 82.4 58 70.7
Lsat_1_v5_gn_9_55121 Lactuca sativa HOM05D008240 ORTHO05D010333 1.7e-14 82.0 45 80.0
EL10Ac3g05605 Beta vulgaris HOM05D008240 ORTHO05D010333 1.1e-13 79.3 57 66.7
EL10Ac3g05606 Beta vulgaris HOM05D008240 ORTHO05D010333 1.1e-13 79.3 57 66.7
Nn6g33426 Nelumbo nucifera HOM05D008240 ORTHO05D010333 1.9e-13 78.6 52 67.3
Solyc03g025480.4 Solanum lycopersicum HOM05D008240 ORTHO05D010333 1.9e-13 78.6 58 69.0
Sopen03g004320 Solanum pennellii HOM05D008240 ORTHO05D010333 1.9e-13 78.6 58 69.0
BolC8t50025H Brassica oleracea HOM05D008240 ORTHO05D010333 2.4e-13 78.2 52 65.4
Oeu045392.1 Olea europaea HOM05D008240 ORTHO05D010333 2.4e-13 78.2 48 75.0
A06p18700 Brassica napus HOM05D002671 ORTHO05D010333 3.2e-13 77.8 49 71.4
MELO3C025428.2 Cucumis melo HOM05D008240 ORTHO05D010333 4.1e-13 77.4 56 66.1
Peaxi162Scf00444g00412 Petunia axillaris HOM05D008240 ORTHO05D010333 5.4e-13 77.0 51 74.5
DCAR_020258 Daucus carota HOM05D008240 ORTHO05D010333 7.1e-13 76.6 42 81.0
Sed0005066 Sechium edule HOM05D008240 ORTHO05D010333 7.1e-13 76.6 56 62.5
Carub.0005s1524 Capsella rubella HOM05D008240 ORTHO05D010333 9.2e-13 76.3 54 66.7
BraA06t24953Z Brassica rapa HOM05D008240 ORTHO05D010333 1.6e-12 75.5 52 63.5
CAN.G1175.10 Capsicum annuum HOM05D008240 ORTHO05D010333 2.1e-12 75.1 47 72.3
PGSC0003DMG400015797 Solanum tuberosum HOM05D008240 ORTHO05D010333 2.1e-12 75.1 58 65.5
CARHR157860 Cardamine hirsuta HOM05D008240 ORTHO05D010333 4.6e-12 73.9 59 59.3
CsaV3_3G005460 Cucumis sativus L. HOM05D008240 ORTHO05D010333 7.8e-12 73.2 56 62.5
Aqoxy7G00310 Aquilegia oxysepala HOM05D008240 ORTHO05D010333 2.3e-11 71.6 49 63.3
GSVIVG01028913001 Vitis vinifera HOM05D008240 ORTHO05D010333 3.9e-11 70.9 42 76.2
Nitab4.5_0000084g0100 Nicotiana tabacum HOM05D008240 ORTHO05D010333 2.8e-09 64.7 45 75.6
Migut.F01103 Erythranthe guttata HOM05D008240 ORTHO05D010333 3.6e-09 64.3 61 55.7
Nitab4.5_0004439g0090 Nicotiana tabacum HOM05D008240 ORTHO05D010333 8.1e-09 63.2 35 77.1
Os07g0175200 Oryza sativa ssp. japonica HOM05D008240 ORTHO05D010333 1.4e-08 62.4 49 57.1
QL07p048914 Quercus lobata HOM05D008240 ORTHO05D010333 8.9e-08 59.7 27 96.3
Nitab4.5_0000885g0010 Nicotiana tabacum HOM05D011433 ORTHO05D010333 1.5e-07 58.9 57 45.6
Ah.05g180620 Amaranthus hybridus HOM05D011433 ORTHO05D013366 9.9e-07 56.2 56 48.2
AUR62022563 Chenopodium quinoa HOM05D011433 ORTHO05D013366 2.2e-06 55.1 52 55.8
Sabra06G0129100 Salix brachista HOM05D008240 ORTHO05D010333 2.2e-06 55.1 44 63.6
Sabra12G0001400 Salix brachista HOM05D008240 ORTHO05D010333 2.2e-06 55.1 44 63.6
Thecc.01G359100 Theobroma cacao HOM05D011433 ORTHO05D013366 6.4e-06 53.5 61 47.5


User provided reference genes

Program Settings