Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr21g0304901 Lupinus albus HOM05D003765 ORTHO05D004561 0.0e+00 1294.3 675 100.0
Lalb_Chr02g0140881 Lupinus albus HOM05D003765 ORTHO05D004561 1.2e-220 770.4 707 65.1
Glyma.20G154100 Glycine max HOM05D003765 ORTHO05D004561 9.0e-165 584.7 732 53.1
Lj5g0012460 Lotus japonicus HOM05D003765 ORTHO05D004561 4.2e-162 575.9 711 54.4
Glyma.10G240600 Glycine max HOM05D003765 ORTHO05D004561 1.2e-161 574.3 730 53.8
Phvul.007G065400 Phaseolus vulgaris HOM05D003765 ORTHO05D004561 6.7e-160 568.5 709 53.2
TPR.G17415 Trifolium pratense HOM05D003765 ORTHO05D004561 3.7e-150 536.2 712 52.4
VMungo0720G0810 Vigna mungo HOM05D003765 ORTHO05D004561 1.7e-147 527.3 714 51.3
Medtr1g101910 Medicago truncatula HOM05D003765 ORTHO05D004561 2.9e-147 526.6 707 52.6
Lj2g0000316 Lotus japonicus HOM05D003765 ORTHO05D004561 6.9e-141 505.4 730 50.3
Phvul.004G123200 Phaseolus vulgaris HOM05D003765 ORTHO05D004561 1.2e-140 504.6 724 51.9
Glyma.09G148700 Glycine max HOM05D003765 ORTHO05D004561 6.7e-136 488.8 761 50.2
Ca_10812_v3 Cicer arietinum L. HOM05D003765 ORTHO05D004561 9.4e-130 468.4 709 48.8
Lalb_Chr03g0034171 Lupinus albus HOM05D003765 ORTHO05D004561 2.1e-129 467.2 744 48.8
Glyma.16G200400 Glycine max HOM05D003765 ORTHO05D004561 1.8e-128 464.2 748 49.3
arahy.Tifrunner.gnm1.ann1.S2H83J Arachis hypogaea HOM05D003765 ORTHO05D004561 9.1e-117 425.2 704 47.7
arahy.Tifrunner.gnm1.ann1.G7HECD Arachis hypogaea HOM05D003765 ORTHO05D004561 9.7e-111 405.2 668 47.8
Psat6g201640 Pisum sativum HOM05D003765 ORTHO05D004561 1.3e-110 404.8 671 47.5
Thecc.03G167000 Theobroma cacao HOM05D003765 ORTHO05D004561 2.4e-109 400.6 763 44.2
TPR.G21305 Trifolium pratense HOM05D003765 ORTHO05D004561 1.3e-102 378.3 738 43.0
Potri.015G135200 Populus trichocarpa HOM05D003765 ORTHO05D004561 4.5e-100 369.8 736 43.6
Manes.06G141500 Manihot esculenta HOM05D003765 ORTHO05D004561 2.8e-97 360.5 754 40.6
Sabra15G0147100 Salix brachista HOM05D003765 ORTHO05D004561 2.8e-97 360.5 740 43.5
Medtr6g089530 Medicago truncatula HOM05D003765 ORTHO05D004561 1.2e-95 355.1 771 40.3
Potri.012G132900 Populus trichocarpa HOM05D003765 ORTHO05D004561 4.4e-95 353.2 760 40.7
Psat1g111440 Pisum sativum HOM05D003765 ORTHO05D004561 8.3e-94 349.0 727 42.0
Duzib084G1451 Durio zibethinus HOM05D003765 ORTHO05D004561 1.6e-92 344.7 735 40.5
Ciclev10004387m.g Citrus clementina HOM05D003765 ORTHO05D004561 2.1e-89 334.3 768 39.5
Gorai.008G281700 Gossypium raimondii HOM05D003765 ORTHO05D004561 5.7e-87 326.2 753 40.2
Sabra12G0100000 Salix brachista HOM05D003765 ORTHO05D004561 5.7e-87 326.2 764 39.9
Manes.14G030900 Manihot esculenta HOM05D003765 ORTHO05D004561 5.9e-84 316.2 745 38.9
Gohir.A12G262100 Gossypium hirsutum HOM05D003765 ORTHO05D004561 9.8e-79 298.9 753 38.9
Atru.chr1.559 Acer truncatum HOM05D003765 ORTHO05D004561 1.3e-78 298.5 791 39.4
Cpa.g.sc4.199 Carica papaya HOM05D003765 ORTHO05D004561 4.1e-77 293.5 740 40.7
Duzib205G1056 Durio zibethinus HOM05D003765 ORTHO05D004561 5.4e-77 293.1 635 41.7
Haze_13790 Corylus avellana HOM05D003765 ORTHO05D004561 2.3e-75 287.7 696 38.9
Actinidia13542 Actinidia chinensis HOM05D003765 ORTHO05D004561 3.9e-75 287.0 734 37.2
Peaxi162Scf00192g00516 Petunia axillaris HOM05D003765 ORTHO05D004561 5.6e-74 283.1 769 38.0
Prupe.2G287400 Prunus persica HOM05D003765 ORTHO05D004561 9.5e-74 282.3 770 37.3
Peaxi162Scf00557g00216 Petunia axillaris HOM05D003765 ORTHO05D004561 2.3e-72 277.7 761 35.9
CiPaw.03G100300 Carya illinoinensis HOM05D003765 ORTHO05D004561 4.0e-72 276.9 731 38.7
Lj1A988T34 Lonicera japonica HOM05D003765 ORTHO05D004561 8.9e-72 275.8 742 37.2
FAN10G2022 Fragaria x ananassa HOM05D003765 ORTHO05D004561 4.9e-70 270.0 710 38.3
RcHm_v2.0_Chr1g0376241 Rosa chinensis HOM05D003765 ORTHO05D004561 1.9e-69 268.1 728 37.5
MD00G1004300 Malus domestica HOM05D003765 ORTHO05D004561 5.4e-69 266.5 757 35.7
MD01G1193200 Malus domestica HOM05D003765 ORTHO05D004561 5.4e-69 266.5 754 35.4
FAN03G1055 Fragaria x ananassa HOM05D003765 ORTHO05D004561 7.1e-69 266.2 719 37.7
Gorai.006G196800 Gossypium raimondii HOM05D003765 ORTHO05D004561 1.6e-68 265.0 732 35.9
FAN03G1770 Fragaria x ananassa HOM05D003765 ORTHO05D004561 4.6e-68 263.5 720 37.5
Gohir.D09G174700 Gossypium hirsutum HOM05D003765 ORTHO05D004561 4.6e-68 263.5 730 36.2
Oeu030141.1 Olea europaea HOM05D003765 ORTHO05D004561 1.3e-67 261.9 730 37.5
Gohir.D12G262800 Gossypium hirsutum HOM05D003765 ORTHO05D004561 2.3e-67 261.2 622 40.5
FvH4_7g28730 Fragaria vesca HOM05D003765 ORTHO05D004561 5.1e-67 260.0 721 37.7
FAN06G4109 Fragaria x ananassa HOM05D003765 ORTHO05D004561 1.9e-66 258.1 721 37.6
FAN06G1616 Fragaria x ananassa HOM05D003765 ORTHO05D004561 3.3e-66 257.3 721 37.7
Oeu030257.1 Olea europaea HOM05D003765 ORTHO05D004561 5.6e-66 256.5 718 35.8
Eucgr.A02847 Eucalyptus grandis HOM05D003765 ORTHO05D004561 6.2e-65 253.1 713 35.9
Gohir.A09G179400 Gossypium hirsutum HOM05D003765 ORTHO05D004561 1.8e-64 251.5 730 34.8
TAR629G2057 Trochodendron aralioides HOM05D003765 ORTHO05D004561 5.2e-64 250.0 735 35.6
CANSAT21G2021 Cannabis sativa HOM05D003765 ORTHO05D004561 7.6e-63 246.1 823 34.8
Cc02_g03580 Coffea canephora HOM05D003765 ORTHO05D004561 1.3e-62 245.4 779 35.3
FAN01G1737 Fragaria x ananassa HOM05D003765 ORTHO05D004561 2.2e-62 244.6 753 36.0
arahy.Tifrunner.gnm1.ann1.3X1084 Arachis hypogaea HOM05D003765 ORTHO05D004561 1.4e-61 241.9 782 35.0
Nitab4.5_0004911g0030 Nicotiana tabacum HOM05D003765 ORTHO05D004561 9.2e-61 239.2 781 34.4
Sopen03g002830 Solanum pennellii HOM05D003765 ORTHO05D004561 3.5e-60 237.3 764 34.7
Dinv35140 Davidia involucrata HOM05D003765 ORTHO05D004561 6.0e-60 236.5 502 43.6
Nitab4.5_0000599g0030 Nicotiana tabacum HOM05D003765 ORTHO05D004561 1.0e-59 235.7 769 33.8
Nitab4.5_0000205g0170 Nicotiana tabacum HOM05D003765 ORTHO05D004561 2.3e-59 234.6 775 34.6
PGSC0003DMG400024251 Solanum tuberosum HOM05D003765 ORTHO05D004561 6.6e-59 233.0 773 34.7
Nn1g01288 Nelumbo nucifera HOM05D003765 ORTHO05D004561 1.1e-58 232.3 802 33.3
GSVIVG01018447001 Vitis vinifera HOM05D003765 ORTHO05D004561 1.1e-58 232.3 723 35.5
MSTRG.8430 Avicennia marina HOM05D003765 ORTHO05D004561 9.6e-58 229.2 706 33.6
VMungo0464G1637 Vigna mungo HOM05D003765 ORTHO05D004561 1.6e-57 228.4 262 58.0
COL.COLO4_14229 Corchorus olitorius HOM05D003765 ORTHO05D004561 5.2e-56 223.4 740 34.1
PGR042G0955 Punica granatum HOM05D003765 ORTHO05D004561 2.4e-53 214.5 733 33.4
Solyc03g006840.4 Solanum lycopersicum HOM05D003765 ORTHO05D004561 2.4e-53 214.5 755 33.0
MSTRG.114 Avicennia marina HOM05D003765 ORTHO05D004561 9.3e-53 212.6 766 32.2
THA.LOC104824843 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 6.0e-52 209.9 722 33.7
DCAR_014604 Daucus carota HOM05D003765 ORTHO05D004561 1.7e-51 208.4 752 34.3
Nn6g34319 Nelumbo nucifera HOM05D003765 ORTHO05D004561 8.7e-51 206.1 808 32.1
SalBow2G1841 Salvia bowleyana HOM05D003765 ORTHO05D004561 4.3e-50 203.8 703 32.1
vmacro06738 Vaccinium macrocarpon HOM05D003765 ORTHO05D004561 2.8e-49 201.1 722 35.3
THA.LOC104798744 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 4.0e-48 197.2 700 31.9
BolC3t18736H Brassica oleracea HOM05D003765 ORTHO05D004561 2.0e-47 194.9 694 32.7
Carub.0008s2285 Capsella rubella HOM05D003765 ORTHO05D004561 4.5e-47 193.7 701 34.0
Rhsim03G0174800 Rhododendron simsii HOM05D003765 ORTHO05D004561 4.5e-47 193.7 636 36.2
Sp2g25350 Schrenkiella parvula HOM05D003765 ORTHO05D004561 1.3e-46 192.2 743 33.0
A06p28880 Brassica napus HOM05D003765 ORTHO05D004561 1.7e-46 191.8 697 33.3
BraA06t25836Z Brassica rapa HOM05D003765 ORTHO05D004561 3.8e-46 190.7 700 33.1
Aqoxy7G00497 Aquilegia oxysepala HOM05D003765 ORTHO05D004561 6.4e-46 189.9 750 30.9
Aa31LG11G1410 Aethionema arabicum HOM05D003765 ORTHO05D004561 1.1e-45 189.1 722 31.3
Thhalv10003732m.g Eutrema salsugineum HOM05D003765 ORTHO05D004561 3.2e-45 187.6 698 32.7
THA.LOC104818268 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 5.4e-45 186.8 737 32.4
arahy.Tifrunner.gnm1.ann1.XAW92V Arachis hypogaea HOM05D003765 ORTHO05D004561 1.3e-43 182.2 786 31.7
Lsat_1_v5_gn_2_130181 Lactuca sativa HOM05D003765 ORTHO05D004561 1.3e-43 182.2 715 32.2
Dinv28506 Davidia involucrata HOM05D003765 ORTHO05D004561 2.1e-41 174.9 447 37.1
AL8G38980 Arabidopsis lyrata HOM05D003765 ORTHO05D004561 6.2e-41 173.3 701 31.1
HanXRQChr14g0461811 Helianthus annuus HOM05D003765 ORTHO05D004561 6.2e-41 173.3 708 30.4
Migut.F01159 Erythranthe guttata HOM05D003765 ORTHO05D004561 5.3e-40 170.2 692 30.8
MBI04_g06623_MAGBIO Magnolia biondii HOM05D003765 ORTHO05D004561 1.5e-39 168.7 613 31.5
CARHR275960 Cardamine hirsuta HOM05D003765 ORTHO05D004561 2.0e-39 168.3 727 30.8
Lsat_1_v5_gn_9_53700 Lactuca sativa HOM05D003765 ORTHO05D004561 2.0e-39 168.3 730 30.3
EL10Ac3g05741 Beta vulgaris HOM05D003765 ORTHO05D004561 1.1e-37 162.5 718 30.9
THA.LOC104811493 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 3.2e-37 161.0 697 30.6
ECA238G0747 Erigeron canadensis HOM05D003765 ORTHO05D004561 4.2e-37 160.6 755 30.2
DCAR_009410 Daucus carota HOM05D003765 ORTHO05D004561 1.2e-36 159.1 680 33.1
Thhalv10012958m.g Eutrema salsugineum HOM05D003765 ORTHO05D004561 1.8e-35 155.2 685 29.2
Ah.07g208800 Amaranthus hybridus HOM05D003765 ORTHO05D004561 3.0e-35 154.5 702 29.6
PSO782G0143 Papaver somniferum HOM05D003765 ORTHO05D004561 3.9e-35 154.1 730 31.4
C03p64740 Brassica napus HOM05D003765 ORTHO05D004561 8.7e-35 152.9 620 31.8
Sp6g14100 Schrenkiella parvula HOM05D003765 ORTHO05D004561 1.5e-34 152.1 699 31.3
PSO478G3102 Papaver somniferum HOM05D003765 ORTHO05D004561 9.6e-34 149.4 756 29.5
ECA232G3914 Erigeron canadensis HOM05D003765 ORTHO05D004561 1.6e-33 148.7 687 30.0
Aa31LG3G8290 Aethionema arabicum HOM05D003765 ORTHO05D004561 3.7e-33 147.5 690 29.6
AT5G62170 Arabidopsis thaliana HOM05D003765 ORTHO05D004561 3.7e-33 147.5 606 32.8
Sc19g0001750 Simmondsia chinensis HOM05D003765 ORTHO05D004561 6.2e-33 146.7 700 29.0
ClCG05G007700 Citrullus lanatus HOM05D003765 ORTHO05D004561 1.4e-32 145.6 721 28.2
AL8G26150 Arabidopsis lyrata HOM05D003765 ORTHO05D004561 1.2e-31 142.5 689 30.6
Hma1.2p1_0488F.1_g163950 Hydrangea macrophylla HOM05D003765 ORTHO05D004561 1.5e-31 142.1 665 29.9
CARHR264740 Cardamine hirsuta HOM05D003765 ORTHO05D004561 2.7e-28 131.3 669 28.6
CDE04G3755 Ceratophyllum demersum HOM05D003765 ORTHO05D004561 3.5e-28 131.0 754 28.8
Sed0025435 Sechium edule HOM05D003765 ORTHO05D004561 4.6e-28 130.6 696 27.6
SalBow4G0450 Salvia bowleyana HOM05D003765 ORTHO05D004561 3.0e-27 127.9 704 29.3
VMungo0464G2043 Vigna mungo HOM05D003765 ORTHO05D004561 5.1e-27 127.1 249 41.0
Lalb_Chr19g0131131 Lupinus albus HOM05D003765 ORTHO05D004561 8.7e-27 126.3 506 32.2
SGA_v2.0_scaffold113G31787 Striga asiatica HOM05D003765 ORTHO05D004561 1.1e-26 125.9 717 28.9
AT5G51850 Arabidopsis thaliana HOM05D003765 ORTHO05D004561 2.2e-25 121.7 688 29.2
CDE07G1851 Ceratophyllum demersum HOM05D003765 ORTHO05D004561 2.8e-25 121.3 744 25.8
CsaV3_3G016640 Cucumis sativus L. HOM05D003765 ORTHO05D004561 1.4e-24 119.0 728 28.8
MELO3C006859.2 Cucumis melo HOM05D003765 ORTHO05D004561 4.1e-24 117.5 728 28.6
Aa31LG6G8690 Aethionema arabicum HOM05D003765 ORTHO05D004561 6.9e-24 116.7 279 42.3
AUR62016059 Chenopodium quinoa HOM05D003765 ORTHO05D004561 5.9e-23 113.6 672 26.8
AUR62021267 Chenopodium quinoa HOM05D003765 ORTHO05D004561 2.9e-22 111.3 263 37.3
Thhalv10025080m.g Eutrema salsugineum HOM05D003765 ORTHO05D004561 6.5e-22 110.2 497 29.8
A10p09680 Brassica napus HOM05D003765 ORTHO05D004561 3.2e-21 107.8 417 30.5
Carub.0008s1189 Capsella rubella HOM05D003765 ORTHO05D004561 3.2e-21 107.8 556 29.9
BraA10t43049Z Brassica rapa HOM05D003765 ORTHO05D004561 1.6e-20 105.5 417 30.2
VMungo0100G0003 Vigna mungo HOM05D003765 ORTHO05D004561 1.1e-18 99.4 112 58.0
Dinv40025 Davidia involucrata HOM05D003765 ORTHO05D000169 2.5e-18 98.2 185 48.1
C09p41340 Brassica napus HOM05D003765 ORTHO05D004561 4.3e-18 97.4 414 30.9
Sp7g23450 Schrenkiella parvula HOM05D003765 ORTHO05D004561 5.7e-18 97.1 352 33.0
BolC9t57009H Brassica oleracea HOM05D003765 ORTHO05D004561 9.7e-18 96.3 460 30.7
Lalb_Chr19g0131141 Lupinus albus HOM05D003765 ORTHO05D004561 3.7e-17 94.4 222 36.5
VMungo0251G2630 Vigna mungo HOM05D003765 ORTHO05D004561 3.7e-17 94.4 112 55.4
BcaB02g09632 Brassica carinata HOM05D003765 ORTHO05D004561 4.8e-17 94.0 536 29.7
VMungo0720G0588 Vigna mungo HOM05D003765 ORTHO05D004561 6.3e-17 93.6 184 38.6
HanXRQChr15g0486221 Helianthus annuus HOM05D003765 ORTHO05D004561 8.2e-17 93.2 485 28.5
BcaB08g35538 Brassica carinata HOM05D003765 ORTHO05D004561 1.4e-16 92.4 437 29.7
unitig_37.g11944 Utricularia gibba HOM05D003765 ORTHO05D004561 1.5e-15 89.0 359 31.2
BolC8t48608H Brassica oleracea HOM05D003765 ORTHO05D004561 5.9e-15 87.0 488 28.5
Migut.F00398 Erythranthe guttata HOM05D003765 ORTHO05D004561 5.0e-14 84.0 312 30.8
BraA09t36408Z Brassica rapa HOM05D003765 ORTHO05D004561 8.5e-14 83.2 323 32.2
BcaB03g12466 Brassica carinata HOM05D003765 ORTHO05D004561 1.9e-13 82.0 414 29.2
A08p21190 Brassica napus HOM05D003765 ORTHO05D004561 3.2e-13 81.3 407 29.5
BraA08t34069Z Brassica rapa HOM05D003765 ORTHO05D004561 5.5e-13 80.5 406 29.3
BolC9t53753H Brassica oleracea HOM05D003765 ORTHO05D004561 1.2e-12 79.3 362 32.0
AT4G25430 Arabidopsis thaliana HOM05D003765 ORTHO05D023707 1.6e-12 79.0 363 30.3
CsaV3_5G005590 Cucumis sativus L. HOM05D003765 ORTHO05D004561 1.6e-12 79.0 343 30.9
ClCG01G005340 Citrullus lanatus HOM05D003765 ORTHO05D004561 2.1e-12 78.6 718 25.3
BcaC07g38188 Brassica carinata HOM05D003765 ORTHO05D004561 2.7e-12 78.2 408 30.1
A09p07540 Brassica napus HOM05D003765 ORTHO05D004561 4.7e-12 77.4 343 30.6
Dinv28507 Davidia involucrata HOM05D003765 ORTHO05D004561 1.0e-11 76.3 170 35.9
BcaNung01408 Brassica carinata HOM05D003765 ORTHO05D004561 1.8e-11 75.5 362 31.5
BcaNung01409 Brassica carinata HOM05D003765 ORTHO05D004561 1.8e-11 75.5 362 31.5
C09p08430 Brassica napus HOM05D003765 ORTHO05D004561 6.7e-11 73.6 382 28.8
ATR0661G439 Amborella trichopoda HOM05D003765 ORTHO05D004561 2.0e-10 72.0 790 24.9
BcaC04g23427 Brassica carinata HOM05D003765 ORTHO05D004561 2.2e-09 68.6 318 30.2
AL7G27690 Arabidopsis lyrata HOM05D003765 ORTHO05D004561 2.4e-08 65.1 355 30.4
Duzib205G0479 Durio zibethinus HOM05D003765 ORTHO05D004561 9.1e-08 63.2 91 42.9
HPP92_022139 Vanilla planifolia HOM05D003765 ORTHO05D004561 1.2e-07 62.8 186 28.5
Carub.0007s1558 Capsella rubella HOM05D003765 ORTHO05D004561 2.6e-07 61.6 363 28.7
Zm00001eb418620 Zea mays HOM05D003765 ORTHO05D004561 4.5e-07 60.8 169 32.0
HPP92_022144 Vanilla planifolia HOM05D003765 ORTHO05D004561 5.9e-07 60.5 186 28.0


User provided reference genes

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