Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr21g0304891 Lupinus albus HOM05D005135 ORTHO05D005810 1.2e-113 413.3 222 100.0
Lalb_Chr06g0160891 Lupinus albus HOM05D005135 ORTHO05D005810 6.5e-80 301.2 217 78.3
VMungo0720G1039 Vigna mungo HOM05D005135 ORTHO05D005810 2.8e-67 259.2 234 65.8
Phvul.007G065300 Phaseolus vulgaris HOM05D005135 ORTHO05D005810 8.3e-67 257.7 234 65.8
Glyma.10G240700 Glycine max HOM05D005135 ORTHO05D005810 1.5e-63 246.9 219 66.7
arahy.Tifrunner.gnm1.ann1.UR3NDK Arachis hypogaea HOM05D005135 ORTHO05D005810 2.3e-61 239.6 217 65.4
TPR.G17397 Trifolium pratense HOM05D005135 ORTHO05D005810 2.6e-60 236.1 214 65.9
arahy.Tifrunner.gnm1.ann1.3G6IEL Arachis hypogaea HOM05D005135 ORTHO05D005810 8.3e-59 231.1 217 63.6
Glyma.20G154000 Glycine max HOM05D005135 ORTHO05D005810 2.9e-56 222.6 218 61.5
Psat7g169320 Pisum sativum HOM05D005135 ORTHO05D005810 2.5e-55 219.5 213 66.7
GSVIVG01018448001 Vitis vinifera HOM05D005135 ORTHO05D005810 1.3e-51 207.2 220 59.1
Ca_10813_v3 Cicer arietinum L. HOM05D005135 ORTHO05D005810 3.2e-50 202.6 216 57.9
Hma1.2p1_0488F.1_g163940 Hydrangea macrophylla HOM05D005135 ORTHO05D005810 4.1e-50 202.2 221 56.6
Dinv35139 Davidia involucrata HOM05D005135 ORTHO05D005810 5.4e-50 201.8 221 56.6
Actinidia31800 Actinidia chinensis HOM05D005135 ORTHO05D005810 1.2e-49 200.7 221 57.5
vmacro09870 Vaccinium macrocarpon HOM05D005135 ORTHO05D005810 1.2e-49 200.7 221 55.2
Lj5g0000742 Lotus japonicus HOM05D005135 ORTHO05D005810 5.9e-49 198.4 234 55.6
Rhsim09G0195100 Rhododendron simsii HOM05D000559 ORTHO05D005810 1.0e-48 197.6 220 55.5
VMungo0464G2082 Vigna mungo HOM05D000559 ORTHO05D005810 3.9e-48 195.7 224 57.6
CiPaw.03G100200 Carya illinoinensis HOM05D005135 ORTHO05D005810 5.0e-48 195.3 216 58.3
Lj1A988G25 Lonicera japonica HOM05D005135 ORTHO05D005810 5.0e-48 195.3 218 56.9
Thecc.03G166900 Theobroma cacao HOM05D005135 ORTHO05D005810 5.0e-48 195.3 221 56.1
Duzib084G0614 Durio zibethinus HOM05D005135 ORTHO05D005810 4.7e-46 188.7 221 54.8
FAN10G2880 Fragaria x ananassa HOM05D005135 ORTHO05D005810 4.7e-46 188.7 220 53.6
Potri.015G135000 Populus trichocarpa HOM05D005135 ORTHO05D005810 4.7e-46 188.7 221 55.2
CSS0048110 Camellia sinensis var. sinensis HOM05D005135 ORTHO05D005810 1.4e-45 187.2 219 52.5
Duzib068G0893 Durio zibethinus HOM05D005135 ORTHO05D005810 1.8e-45 186.8 220 52.7
FAN01G0847 Fragaria x ananassa HOM05D005135 ORTHO05D005810 1.8e-45 186.8 220 53.2
Medtr1g101945 Medicago truncatula HOM05D005135 ORTHO05D005810 1.8e-45 186.8 212 55.2
CAN.G1187.4 Capsicum annuum HOM05D005135 ORTHO05D005810 5.2e-45 185.3 220 54.5
Nn1g01287 Nelumbo nucifera HOM05D005135 ORTHO05D005810 6.8e-45 184.9 224 56.7
Eucgr.K00188 Eucalyptus grandis HOM05D005135 ORTHO05D005810 2.0e-44 183.3 220 55.0
PGSC0003DMG400027379 Solanum tuberosum HOM05D005135 ORTHO05D005810 2.0e-44 183.3 219 52.1
Peaxi162Scf00557g00212 Petunia axillaris HOM05D005135 ORTHO05D005810 3.4e-44 182.6 219 51.1
Gohir.A12G262200 Gossypium hirsutum HOM05D005135 ORTHO05D005810 4.4e-44 182.2 220 54.5
Solyc11g072300.2 Solanum lycopersicum HOM05D005135 ORTHO05D005810 4.4e-44 182.2 219 52.5
Sabra15G0147000 Salix brachista HOM05D005135 ORTHO05D005810 7.5e-44 181.4 249 49.4
Sopen11g029970 Solanum pennellii HOM05D005135 ORTHO05D005810 9.8e-44 181.0 219 52.5
Gohir.D12G262900 Gossypium hirsutum HOM05D005135 ORTHO05D005810 1.3e-43 180.6 220 54.1
COL.COLO4_14228 Corchorus olitorius HOM05D005135 ORTHO05D005810 1.7e-43 180.3 221 53.4
Nitab4.5_0000205g0180 Nicotiana tabacum HOM05D005135 ORTHO05D005810 1.7e-43 180.3 220 53.6
Oeu022533.1 Olea europaea HOM05D005135 ORTHO05D005810 1.7e-43 180.3 215 50.7
Gorai.008G281800 Gossypium raimondii HOM05D005135 ORTHO05D005810 2.2e-43 179.9 220 54.1
FAN06G3133 Fragaria x ananassa HOM05D005135 ORTHO05D005810 3.7e-43 179.1 221 51.6
ClCG05G007690 Citrullus lanatus HOM05D005135 ORTHO05D005810 6.4e-43 178.3 225 51.1
Manes.14G031000 Manihot esculenta HOM05D005135 ORTHO05D005810 6.4e-43 178.3 220 54.1
TWI23G0093 Tripterygium wilfordii HOM05D005135 ORTHO05D005810 6.4e-43 178.3 221 53.4
FAN06G4903 Fragaria x ananassa HOM05D005135 ORTHO05D005810 8.3e-43 177.9 221 51.1
MELO3C006858.2 Cucumis melo HOM05D005135 ORTHO05D005810 1.1e-42 177.6 224 50.0
FAN03G3482 Fragaria x ananassa HOM05D005135 ORTHO05D005810 4.1e-42 175.6 221 51.1
CsaV3_3G016630 Cucumis sativus L. HOM05D005135 ORTHO05D005810 9.2e-42 174.5 224 50.0
Sopen03g002840 Solanum pennellii HOM05D005135 ORTHO05D005810 9.2e-42 174.5 220 50.9
MSTRG.8780 Avicennia marina HOM05D005135 ORTHO05D005810 1.2e-41 174.1 217 51.2
PSO782G0956 Papaver somniferum HOM05D005135 ORTHO05D005810 1.2e-41 174.1 222 49.5
RcHm_v2.0_Chr1g0376221 Rosa chinensis HOM05D005135 ORTHO05D005810 1.2e-41 174.1 221 50.7
FAN03G1115 Fragaria x ananassa HOM05D005135 ORTHO05D005810 1.6e-41 173.7 221 51.1
Solyc03g006850.3 Solanum lycopersicum HOM05D005135 ORTHO05D005810 2.7e-41 172.9 220 50.5
CAN.G1182.3 Capsicum annuum HOM05D005135 ORTHO05D005810 4.6e-41 172.2 219 49.3
FvH4_7g28720 Fragaria vesca HOM05D005135 ORTHO05D005810 4.6e-41 172.2 215 51.2
Gohir.D08G104900 Gossypium hirsutum HOM05D005135 ORTHO05D005810 6.0e-41 171.8 220 50.5
unitig_52.g17751 Utricularia gibba HOM05D005135 ORTHO05D005810 6.0e-41 171.8 221 51.1
Oeu030142.1 Olea europaea HOM05D005135 ORTHO05D005810 1.0e-40 171.0 221 48.9
Nitab4.5_0001573g0020 Nicotiana tabacum HOM05D005135 ORTHO05D005810 1.3e-40 170.6 216 52.3
Sed0024541 Sechium edule HOM05D005135 ORTHO05D005810 1.3e-40 170.6 220 49.5
EL10Ac3g05742 Beta vulgaris HOM05D005135 ORTHO05D005810 1.7e-40 170.2 217 50.7
TAR629G2517 Trochodendron aralioides HOM05D005135 ORTHO05D005810 5.0e-40 168.7 222 52.3
Oeu030256.1 Olea europaea HOM05D005135 ORTHO05D005810 8.6e-40 167.9 217 47.9
PGR142G1544 Punica granatum HOM05D005135 ORTHO05D005810 1.1e-39 167.5 218 49.1
Gohir.A08G093700 Gossypium hirsutum HOM05D005135 ORTHO05D005810 1.5e-39 167.2 220 49.5
Rhsim03G0174700 Rhododendron simsii HOM05D000559 ORTHO05D000596 3.3e-39 166.0 221 50.7
Sc13g0008230 Simmondsia chinensis HOM05D005135 ORTHO05D005810 3.3e-39 166.0 219 49.8
Ciclev10005677m.g Citrus clementina HOM05D005135 ORTHO05D005810 9.5e-39 164.5 222 49.5
AUR62021268 Chenopodium quinoa HOM05D005135 ORTHO05D005810 1.2e-38 164.1 220 48.2
MD01G1193100 Malus domestica HOM05D005135 ORTHO05D005810 1.2e-38 164.1 214 51.9
PSO478G0331 Papaver somniferum HOM05D005135 ORTHO05D005810 1.2e-38 164.1 221 48.9
Prupe.2G287200 Prunus persica HOM05D005135 ORTHO05D005810 2.8e-38 162.9 215 51.6
Migut.F01160 Erythranthe guttata HOM05D005135 ORTHO05D005810 4.7e-38 162.2 221 47.5
MD00G1004200 Malus domestica HOM05D005135 ORTHO05D005810 8.1e-38 161.4 214 50.9
DCAR_020208 Daucus carota HOM05D005135 ORTHO05D005810 1.4e-37 160.6 221 51.6
TWI39G0390 Tripterygium wilfordii HOM05D005135 ORTHO05D005810 5.2e-37 158.7 213 49.3
HanXRQChr14g0461821 Helianthus annuus HOM05D005135 ORTHO05D005810 1.2e-36 157.5 212 47.2
ECA238G2105 Erigeron canadensis HOM05D005135 ORTHO05D005810 1.5e-36 157.1 212 50.5
SGA_v2.0_scaffold10G05426 Striga asiatica HOM05D005135 ORTHO05D005810 1.5e-36 157.1 216 50.0
Sed0023089 Sechium edule HOM05D005135 ORTHO05D005810 3.4e-36 156.0 224 44.6
SGA_v2.0_scaffold303G47872 Striga asiatica HOM05D005135 ORTHO05D005810 2.2e-35 153.3 267 42.7
Aqoxy7G00498 Aquilegia oxysepala HOM05D005135 ORTHO05D005810 4.9e-35 152.1 220 49.5
ATR0661G043 Amborella trichopoda HOM05D005135 ORTHO05D005810 6.4e-35 151.8 225 48.9
CDE07G1455 Ceratophyllum demersum HOM05D005135 ORTHO05D005810 8.3e-35 151.4 228 48.7
Ah.07g208790 Amaranthus hybridus HOM05D005135 ORTHO05D005810 1.9e-34 150.2 215 44.7
Cc02_g03590 Coffea canephora HOM05D005135 ORTHO05D005810 3.2e-34 149.4 219 45.7
BolC3t14274H Brassica oleracea HOM05D005135 ORTHO05D005810 1.6e-33 147.1 218 44.5
Dinv28508 Davidia involucrata HOM05D005135 ORTHO05D005810 2.1e-33 146.7 119 68.9
Glyma.16G200500 Glycine max HOM05D005135 ORTHO05D005810 3.5e-33 146.0 218 47.7
A03p16010 Brassica napus HOM05D005135 ORTHO05D005810 4.6e-33 145.6 218 45.0
Zm00001eb027200 Zea mays HOM05D005135 ORTHO05D005810 4.6e-33 145.6 226 45.1
Aa31LG3G8280 Aethionema arabicum HOM05D005135 ORTHO05D005810 6.0e-33 145.2 220 45.5
BcaC01g06140 Brassica carinata HOM05D005135 ORTHO05D005810 7.8e-33 144.8 218 44.5
BraA03t10892Z Brassica rapa HOM05D005135 ORTHO05D005810 1.0e-32 144.4 219 45.2
C03p18840 Brassica napus HOM05D005135 ORTHO05D005810 2.3e-32 143.3 218 44.0
PGR042G3048 Punica granatum HOM05D005135 ORTHO05D005810 3.0e-32 142.9 117 68.4
Hund04685 Selenicereus undatus HOM05D005135 ORTHO05D005810 3.9e-32 142.5 219 43.8
Actinidia03096 Actinidia chinensis HOM05D005135 ORTHO05D005810 3.3e-31 139.4 190 48.9
HPP92_001726 Vanilla planifolia HOM05D005135 ORTHO05D005810 3.3e-31 139.4 221 45.2
Lsat_1_v5_gn_2_130120 Lactuca sativa HOM05D005135 ORTHO05D005810 9.5e-31 137.9 220 45.0
Sp6g14090 Schrenkiella parvula HOM05D005135 ORTHO05D005810 9.5e-31 137.9 218 45.4
vmacro06737 Vaccinium macrocarpon HOM05D005135 ORTHO05D005810 1.2e-30 137.5 129 61.2
HPP92_001719 Vanilla planifolia HOM05D005135 ORTHO05D005810 1.2e-30 137.5 221 43.9
PGSC0003DMG400024247 Solanum tuberosum HOM05D005135 ORTHO05D005810 1.6e-30 137.1 176 48.3
Actinidia14214 Actinidia chinensis HOM05D005135 ORTHO05D005810 2.1e-30 136.7 158 55.7
Potri.012G132832 Populus trichocarpa HOM05D005135 ORTHO05D005810 4.7e-30 135.6 182 48.9
Gohir.D04G141600 Gossypium hirsutum HOM05D005135 ORTHO05D005810 6.2e-30 135.2 116 64.7
BcaB08g35536 Brassica carinata HOM05D005135 ORTHO05D005810 1.1e-29 134.4 218 44.0
AL8G26130 Arabidopsis lyrata HOM05D005135 ORTHO05D005810 5.2e-29 132.1 218 44.5
Thhalv10014510m.g Eutrema salsugineum HOM05D005135 ORTHO05D005810 5.2e-29 132.1 218 44.0
Carub.0008s1186 Capsella rubella HOM05D005135 ORTHO05D005810 6.8e-29 131.7 218 43.6
CARHR264720 Cardamine hirsuta HOM05D005135 ORTHO05D005810 6.8e-29 131.7 218 41.7
AT5G51840 Arabidopsis thaliana HOM05D005135 ORTHO05D005810 8.9e-29 131.3 218 44.0
AUR62016060 Chenopodium quinoa HOM05D005135 ORTHO05D005810 3.4e-28 129.4 234 41.5
BcaB01g04154 Brassica carinata HOM05D005135 ORTHO05D005810 7.6e-28 128.3 219 42.0
Peaxi162Scf00192g00520 Petunia axillaris HOM05D005135 ORTHO05D005810 4.1e-26 122.5 158 48.7
Haze_13791 Corylus avellana HOM05D005135 ORTHO05D005810 6.0e-25 118.6 168 47.6
Lj8A32T30 Lonicera japonica HOM05D005135 ORTHO05D005810 1.9e-23 113.6 181 44.2
Mapoly0096s0072 Marchantia polymorpha HOM05D005135 ORTHO05D005810 3.3e-23 112.8 244 38.9
Phvul.004G123300 Phaseolus vulgaris HOM05D005135 ORTHO05D005810 1.2e-22 110.9 219 42.5
Pp3c13_17710 Physcomitrium patens HOM05D005135 ORTHO05D005810 3.1e-21 106.3 255 37.3
CDE04G3520 Ceratophyllum demersum HOM05D005135 ORTHO05D005810 5.2e-21 105.5 193 44.0
AagrBONN_evm.TU.Sc2ySwM_117.1266 Anthoceros agrestis HOM05D005135 ORTHO05D005810 1.2e-20 104.4 247 36.8
SHI48584 Sapria himalayana HOM05D005135 ORTHO05D005810 1.9e-15 87.0 153 43.8
Hma1.2p1_3202F.1_g333920 Hydrangea macrophylla HOM05D005135 ORTHO05D005810 1.4e-13 80.9 55 76.4
BcaC04g20628 Brassica carinata HOM05D005135 ORTHO05D005810 2.0e-12 77.0 209 34.9
Cre16.g661800 Chlamydomonas reinhardtii HOM05D005135 ORTHO05D005810 2.2e-11 73.6 107 42.1
Glyma.09G148800 Glycine max HOM05D005135 ORTHO05D005810 2.2e-11 73.6 96 52.1
Lj8C32T8 Lonicera japonica HOM05D005135 ORTHO05D005810 1.6e-09 67.4 62 62.9
Os10g0188400 Oryza sativa ssp. japonica HOM05D005135 ORTHO05D005810 1.3e-08 64.3 66 62.1
TAR291G0007 Trochodendron aralioides HOM05D005135 ORTHO05D005810 2.5e-07 60.1 142 36.6
AL8G30000 Arabidopsis lyrata HOM05D005135 ORTHO05D005810 7.4e-07 58.5 62 53.2
SHI13830 Sapria himalayana HOM05D005135 ORTHO05D005810 1.6e-06 57.4 121 37.2
SEGI_16349 Sequoiadendron giganteum HOM05D056048 ORTHO05D005810 1.6e-06 57.4 236 30.1


User provided reference genes

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