Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr21g0304861 Lupinus albus HOM05D007548 ORTHO05D009527 4.4e-142 508.1 277 100.0
Glyma.10G242400 Glycine max HOM05D007548 ORTHO05D009527 4.3e-57 225.7 318 51.6
Lj5g0018367 Lotus japonicus HOM05D007548 ORTHO05D009527 1.0e-53 214.5 312 51.6
Glyma.20G151700 Glycine max HOM05D007548 ORTHO05D009527 1.2e-46 191.0 311 46.3
Medtr1g102510 Medicago truncatula HOM05D007548 ORTHO05D009527 1.1e-41 174.5 287 45.6
Phvul.007G063100 Phaseolus vulgaris HOM05D007548 ORTHO05D009527 4.4e-41 172.6 302 45.0
Psat6g202320 Pisum sativum HOM05D007548 ORTHO05D009527 3.2e-36 156.4 289 42.9
Potri.015G132000 Populus trichocarpa HOM05D007548 ORTHO05D009527 1.0e-34 151.4 308 38.6
Haze_13820 Corylus avellana HOM05D007548 ORTHO05D009527 8.8e-34 148.3 304 41.1
Cfa008236 Carpinus fangiana HOM05D007548 ORTHO05D009527 2.6e-33 146.7 297 41.1
arahy.Tifrunner.gnm1.ann1.WA56KQ Arachis hypogaea HOM05D001870 ORTHO05D001797 4.8e-32 142.5 294 41.8
arahy.Tifrunner.gnm1.ann1.J4U887 Arachis hypogaea HOM05D001870 ORTHO05D001797 1.2e-30 137.9 291 41.6
TPR.G26079 Trifolium pratense HOM05D007548 ORTHO05D009527 1.2e-30 137.9 285 38.9
VMungo0720G2396 Vigna mungo HOM05D007548 ORTHO05D009527 4.5e-30 136.0 274 40.9
CiPaw.03G097400 Carya illinoinensis HOM05D007548 ORTHO05D009527 5.9e-30 135.6 312 39.1
Thecc.03G162900 Theobroma cacao HOM05D007548 ORTHO05D009527 1.7e-29 134.0 312 38.5
Duzib068G0425 Durio zibethinus HOM05D007548 ORTHO05D009527 5.0e-29 132.5 302 39.1
TWI39G0023 Tripterygium wilfordii HOM05D007548 ORTHO05D009527 3.6e-27 126.3 314 38.2
Ciclev10007148m.g Citrus clementina HOM05D007548 ORTHO05D009527 4.4e-25 119.4 264 40.5
Prupe.2G283000 Prunus persica HOM05D007548 ORTHO05D009527 5.7e-25 119.0 320 37.5
FvH4_7g28270 Fragaria vesca HOM05D007548 ORTHO05D009527 1.7e-24 117.5 314 38.9
FAN06G3028 Fragaria x ananassa HOM05D007548 ORTHO05D009527 1.7e-24 117.5 314 38.9
FAN06G3476 Fragaria x ananassa HOM05D007548 ORTHO05D009527 1.7e-24 117.5 314 38.9
Atru.chr1.619 Acer truncatum HOM05D007548 ORTHO05D009527 2.2e-24 117.1 287 37.3
FAN03G1824 Fragaria x ananassa HOM05D007548 ORTHO05D009527 8.3e-24 115.2 318 39.3
Cpa.g.sc13.212 Carica papaya HOM05D007548 ORTHO05D009527 1.2e-22 111.3 294 38.4
Gohir.A12G263800 Gossypium hirsutum HOM05D007548 ORTHO05D009527 3.5e-22 109.8 301 36.5
FAN01G2764 Fragaria x ananassa HOM05D007548 ORTHO05D009527 1.0e-21 108.2 316 37.3
Manes.06G138600 Manihot esculenta HOM05D007548 ORTHO05D009527 3.8e-21 106.3 302 32.8
Peaxi162Scf00192g00096 Petunia axillaris HOM05D007548 ORTHO05D009527 8.5e-21 105.1 289 38.1
CANSAT80G1542 Cannabis sativa HOM05D007548 ORTHO05D009527 1.5e-20 104.4 265 40.0
TAR636G2044 Trochodendron aralioides HOM05D007548 ORTHO05D009527 1.5e-20 104.4 294 36.1
Gohir.D12G264100 Gossypium hirsutum HOM05D007548 ORTHO05D009527 3.2e-20 103.2 290 33.8
DCAR_018129 Daucus carota HOM05D007548 ORTHO05D009527 5.5e-20 102.4 302 36.4
Gorai.008G283300 Gossypium raimondii HOM05D007548 ORTHO05D009527 5.5e-20 102.4 295 36.6
COL.COLO4_14190 Corchorus olitorius HOM05D007548 ORTHO05D009527 1.2e-19 101.3 206 41.7
Oeu021733.1 Olea europaea HOM05D007548 ORTHO05D009527 1.0e-18 98.2 285 37.2
THA.LOC104798720 Tarenaya hassleriana HOM05D007548 ORTHO05D009527 1.4e-18 97.8 303 36.3
Oeu021734.1 Olea europaea HOM05D007548 ORTHO05D009527 6.8e-18 95.5 281 37.4
Actinidia13550 Actinidia chinensis HOM05D007548 ORTHO05D009527 8.8e-18 95.1 280 35.7
Cc02_g03840 Coffea canephora HOM05D007548 ORTHO05D009527 2.0e-17 94.0 308 34.7
FAN03G2953 Fragaria x ananassa HOM05D007548 ORTHO05D009527 9.8e-17 91.7 277 39.0
Nitab4.5_0008495g0030 Nicotiana tabacum HOM05D007548 ORTHO05D009527 3.7e-16 89.7 302 34.8
RcHm_v2.0_Chr1g0375221 Rosa chinensis HOM05D007548 ORTHO05D009527 4.9e-16 89.4 273 40.3
Actinidia25043 Actinidia chinensis HOM05D007548 ORTHO05D009527 1.8e-15 87.4 276 34.1
Manes.14G032600 Manihot esculenta HOM05D007548 ORTHO05D009527 2.4e-15 87.0 267 31.8
Carub.0008s1170 Capsella rubella HOM05D007548 ORTHO05D009527 4.1e-15 86.3 338 32.0
SalBow4G1498 Salvia bowleyana HOM05D007548 ORTHO05D009527 1.2e-14 84.7 314 34.1
CARHR264530 Cardamine hirsuta HOM05D007548 ORTHO05D009527 2.0e-14 84.0 341 29.9
arahy.Tifrunner.gnm1.ann1.1QTB59 Arachis hypogaea HOM05D007548 ORTHO05D009527 2.7e-14 83.6 148 39.2
Rhsim03G0172300 Rhododendron simsii HOM05D007548 ORTHO05D009527 4.5e-14 82.8 311 33.1
AL8G25930 Arabidopsis lyrata HOM05D007548 ORTHO05D009527 5.9e-14 82.4 333 31.2
MSTRG.27166 Avicennia marina HOM05D007548 ORTHO05D009527 5.9e-14 82.4 313 32.3
Aa31LG3G8110 Aethionema arabicum HOM05D007548 ORTHO05D009527 1.0e-13 81.6 356 28.9
Nitab4.5_0000072g0300 Nicotiana tabacum HOM05D007548 ORTHO05D009527 1.3e-13 81.3 291 34.0
AT5G51680 Arabidopsis thaliana HOM05D007548 ORTHO05D009527 1.1e-12 78.2 344 31.7
SalBow4G2379 Salvia bowleyana HOM05D007548 ORTHO05D009527 1.5e-12 77.8 221 38.0
Eucgr.K00142 Eucalyptus grandis HOM05D007548 ORTHO05D009527 2.5e-12 77.0 283 32.5
HanXRQChr05g0141371 Helianthus annuus HOM05D007548 ORTHO05D009527 1.2e-11 74.7 266 34.2
Dinv07997 Davidia involucrata HOM05D007548 ORTHO05D009527 1.6e-11 74.3 217 34.1
PGR142G1046 Punica granatum HOM05D007548 ORTHO05D009527 1.6e-11 74.3 279 30.5
Lj8A35G80 Lonicera japonica HOM05D007548 ORTHO05D009527 2.1e-11 73.9 282 31.9
Thhalv10014011m.g Eutrema salsugineum HOM05D007548 ORTHO05D009527 3.6e-11 73.2 339 31.3
Nn4g26440 Nelumbo nucifera HOM05D007548 ORTHO05D009527 8.0e-11 72.0 307 31.6
arahy.Tifrunner.gnm1.ann1.Z61DE3 Arachis hypogaea HOM05D007548 ORTHO05D009527 1.8e-10 70.9 255 30.2
Migut.F00422 Erythranthe guttata HOM05D007548 ORTHO05D009527 6.8e-10 68.9 287 33.1
EL10Ac3g05788 Beta vulgaris HOM05D007548 ORTHO05D009527 1.5e-09 67.8 308 32.5
Sopen03g003070 Solanum pennellii HOM05D007548 ORTHO05D009527 2.6e-09 67.0 317 30.3
Sp6g13900 Schrenkiella parvula HOM05D007548 ORTHO05D009527 1.7e-08 64.3 166 34.9
FAN10G1395 Fragaria x ananassa HOM05D007548 ORTHO05D009527 2.2e-08 63.9 81 58.0
PSO782G0883 Papaver somniferum HOM05D007548 ORTHO05D009527 2.9e-08 63.5 304 30.6
PSO478G0091 Papaver somniferum HOM05D007548 ORTHO05D009527 1.4e-07 61.2 244 33.2
Solyc03g007080.4 Solanum lycopersicum HOM05D007548 ORTHO05D009527 1.8e-07 60.8 237 30.4
SGA_v2.0_scaffold2G01130 Striga asiatica HOM05D007548 ORTHO05D009527 1.8e-07 60.8 253 32.4
Ah.07g208330 Amaranthus hybridus HOM05D007548 ORTHO05D009527 4.1e-07 59.7 298 28.9
Lsat_1_v5_gn_8_8041 Lactuca sativa HOM05D007548 ORTHO05D009527 5.4e-07 59.3 267 30.7
Nn1g01184 Nelumbo nucifera HOM05D007548 ORTHO05D009527 5.4e-07 59.3 270 31.5
PGSC0003DMG400031012 Solanum tuberosum HOM05D007548 ORTHO05D009527 7.0e-07 58.9 288 30.6
AUR62016096 Chenopodium quinoa HOM05D007548 ORTHO05D009527 1.2e-06 58.2 295 29.2


User provided reference genes

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