Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr07g0192081 Lupinus albus HOM05D007549 ORTHO05D009532 4.5e-32 140.6 68 100.0
Lalb_Chr20g0115511 Lupinus albus HOM05D007549 ORTHO05D009532 4.5e-32 140.6 68 100.0
Glyma.12G232300 Glycine max HOM05D007549 ORTHO05D009532 5.3e-25 117.1 68 85.3
Lalb_Chr23g0274441 Lupinus albus HOM05D007549 ORTHO05D009532 5.3e-25 117.1 68 89.7
PSO548G0033 Papaver somniferum HOM05D007549 ORTHO05D009532 2.0e-24 115.2 68 80.9
RcHm_v2.0_CPg0502021 Rosa chinensis HOM05D007549 ORTHO05D009532 2.0e-24 115.2 68 83.8
Sed0011532 Sechium edule HOM05D007549 ORTHO05D009532 3.5e-24 114.4 68 82.4
Sed0017373 Sechium edule HOM05D007549 ORTHO05D009532 3.5e-24 114.4 68 82.4
Sed0021629 Sechium edule HOM05D007549 ORTHO05D009532 3.5e-24 114.4 68 82.4
Sed0025178 Sechium edule HOM05D007549 ORTHO05D009532 3.5e-24 114.4 68 82.4
CsaV3_7G024610 Cucumis sativus L. HOM05D007549 ORTHO05D009532 4.5e-24 114.0 68 83.8
MELO3C001514.2 Cucumis melo HOM05D007549 ORTHO05D009532 1.0e-23 112.8 68 82.4
Ciclev10033989m.g Citrus clementina HOM05D007549 ORTHO05D009532 1.3e-23 112.5 68 80.9
Lj1g0000802 Lotus japonicus HOM05D007549 ORTHO05D009532 1.3e-23 112.5 68 83.8
LjContig00318g0016693 Lotus japonicus HOM05D007549 ORTHO05D009532 1.3e-23 112.5 68 83.8
Gohir.1Z050480 Gossypium hirsutum HOM05D007549 ORTHO05D009532 1.7e-23 112.1 68 79.4
Gohir.A09G103600 Gossypium hirsutum HOM05D007549 ORTHO05D009532 1.7e-23 112.1 68 79.4
Nn021s41532 Nelumbo nucifera HOM05D007549 ORTHO05D009532 1.7e-23 112.1 68 80.9
EL10As12g24029 Beta vulgaris HOM05D007549 ORTHO05D009532 2.2e-23 111.7 68 80.9
EL10As15g24130 Beta vulgaris HOM05D007549 ORTHO05D009532 2.2e-23 111.7 68 80.9
BolSC49t61174H Brassica oleracea HOM05D007549 ORTHO05D009532 2.2e-23 111.7 68 77.9
Gohir.D12G108000 Gossypium hirsutum HOM05D007549 ORTHO05D009532 2.2e-23 111.7 68 79.4
CARHR282150 Cardamine hirsuta HOM05D007549 ORTHO05D009532 2.9e-23 111.3 68 77.9
A06p23130 Brassica napus HOM05D007549 ORTHO05D009532 3.8e-23 110.9 68 77.9
BNapus_Darmor_BZH_scaffold_253p00240 Brassica napus HOM05D007549 ORTHO05D009532 3.8e-23 110.9 68 77.9
BNapus_Darmor_BZH_scaffold_287p00180 Brassica napus HOM05D007549 ORTHO05D009532 3.8e-23 110.9 68 77.9
C02p43570 Brassica napus HOM05D007549 ORTHO05D009532 3.8e-23 110.9 68 77.9
C06p22970 Brassica napus HOM05D007549 ORTHO05D009532 3.8e-23 110.9 68 77.9
C06p23020 Brassica napus HOM05D007549 ORTHO05D009532 3.8e-23 110.9 68 77.9
BolC8t52432H Brassica oleracea HOM05D007549 ORTHO05D009532 3.8e-23 110.9 68 77.9
BolSC29t60475H Brassica oleracea HOM05D007549 ORTHO05D009532 3.8e-23 110.9 68 77.9
BolSC29t60596H Brassica oleracea HOM05D007549 ORTHO05D009532 3.8e-23 110.9 68 77.9
BolSC35t60656H Brassica oleracea HOM05D007549 ORTHO05D009532 3.8e-23 110.9 68 77.9
BolSC35t60741H Brassica oleracea HOM05D007549 ORTHO05D009532 3.8e-23 110.9 68 77.9
BolSC47t61088H Brassica oleracea HOM05D007549 ORTHO05D009532 3.8e-23 110.9 68 77.9
BraA06t25416Z Brassica rapa HOM05D007549 ORTHO05D009532 3.8e-23 110.9 68 77.9
BraSC25t45857Z Brassica rapa HOM05D007549 ORTHO05D009532 3.8e-23 110.9 68 77.9
Lj5g0014355 Lotus japonicus HOM05D007549 ORTHO05D009532 3.8e-23 110.9 68 82.4
AL2G21610 Arabidopsis lyrata HOM05D007549 ORTHO05D009532 5.0e-23 110.5 68 77.9
ATCG00640 Arabidopsis thaliana HOM05D007549 ORTHO05D009532 8.5e-23 109.8 68 76.5
Gohir.D02G088100 Gossypium hirsutum HOM05D007549 ORTHO05D009532 8.5e-23 109.8 68 77.9
Gohir.A06G124600 Gossypium hirsutum HOM05D007549 ORTHO05D009532 1.1e-22 109.4 68 77.9
PGR111G0018 Punica granatum HOM05D007549 ORTHO05D009532 1.1e-22 109.4 69 76.8
BolC9t53163H Brassica oleracea HOM05D007549 ORTHO05D009532 1.5e-22 109.0 68 77.9
Glyma.15G239000 Glycine max HOM05D007549 ORTHO05D009532 1.5e-22 109.0 68 80.9
DCAR_032505 Daucus carota HOM05D007549 ORTHO05D009532 1.9e-22 108.6 68 76.5
HanXRQChr00c0314g0573541 Helianthus annuus HOM05D007549 ORTHO05D009532 3.2e-22 107.8 68 76.5
HanXRQChr01g0020311 Helianthus annuus HOM05D007549 ORTHO05D009532 3.2e-22 107.8 68 76.5
HanXRQChr02g0041601 Helianthus annuus HOM05D007549 ORTHO05D009532 3.2e-22 107.8 68 76.5
HanXRQChr02g0044861 Helianthus annuus HOM05D007549 ORTHO05D009532 3.2e-22 107.8 68 76.5
HanXRQChr10g0284281 Helianthus annuus HOM05D007549 ORTHO05D009532 3.2e-22 107.8 68 76.5
HanXRQChr10g0289301 Helianthus annuus HOM05D007549 ORTHO05D009532 3.2e-22 107.8 68 76.5
HanXRQChr10g0318161 Helianthus annuus HOM05D007549 ORTHO05D009532 3.2e-22 107.8 68 76.5
HanXRQChr11g0326871 Helianthus annuus HOM05D007549 ORTHO05D009532 3.2e-22 107.8 68 76.5
HanXRQChr11g0345191 Helianthus annuus HOM05D007549 ORTHO05D009532 3.2e-22 107.8 68 76.5
HanXRQCPg0580081 Helianthus annuus HOM05D007549 ORTHO05D009532 3.2e-22 107.8 68 76.5
Solyc09g064410.1 Solanum lycopersicum HOM05D007549 ORTHO05D009532 3.2e-22 107.8 68 77.9
HanXRQChr04g0095131 Helianthus annuus HOM05D007549 ORTHO05D009532 4.2e-22 107.5 68 76.5
Potri.003G067400 Populus trichocarpa HOM05D007549 ORTHO05D009532 4.2e-22 107.5 68 77.9
BolC2t08912H Brassica oleracea HOM05D007549 ORTHO05D009532 5.5e-22 107.1 68 76.5
BolC6t36197H Brassica oleracea HOM05D007549 ORTHO05D009532 5.5e-22 107.1 68 75.0
CAN.G1148.11 Capsicum annuum HOM05D007549 ORTHO05D009532 5.5e-22 107.1 68 77.9
CAN.G1314.5 Capsicum annuum HOM05D007549 ORTHO05D009532 5.5e-22 107.1 68 77.9
CAN.G2018.15 Capsicum annuum HOM05D007549 ORTHO05D009532 5.5e-22 107.1 68 77.9
CAN.G2018.7 Capsicum annuum HOM05D007549 ORTHO05D009532 5.5e-22 107.1 68 77.9
CAN.G438.85 Capsicum annuum HOM05D007549 ORTHO05D009532 5.5e-22 107.1 68 77.9
BraSC138t45567Z Brassica rapa HOM05D007549 ORTHO05D009532 1.2e-21 105.9 66 75.8
Gohir.A10G214800 Gossypium hirsutum HOM05D007549 ORTHO05D009532 1.2e-21 105.9 68 75.0
Medtr4g051350 Medicago truncatula HOM05D004570 ORTHO05D009532 1.6e-21 105.5 62 80.6
CAN.G3365.3 Capsicum annuum HOM05D007549 ORTHO05D009532 2.1e-21 105.1 68 76.5
Medtr8g045210 Medicago truncatula HOM05D007549 ORTHO05D009532 3.6e-21 104.4 63 77.8
arahy.Tifrunner.gnm1.ann1.JD40MT Arachis hypogaea HOM05D007549 ORTHO05D009532 4.7e-21 104.0 60 85.0
CAN.G452.5 Capsicum annuum HOM05D007549 ORTHO05D009532 1.0e-20 102.8 68 76.5
ClCG11G009530 Citrullus lanatus HOM05D007549 ORTHO05D009532 2.3e-20 101.7 62 80.6
BraSC58t46491Z Brassica rapa HOM05D007549 ORTHO05D009532 3.0e-20 101.3 63 76.2
HanXRQChr02g0052591 Helianthus annuus HOM05D007549 ORTHO05D009532 5.2e-20 100.5 68 70.6
HanXRQChr00c0339g0573821 Helianthus annuus HOM05D007549 ORTHO05D009532 8.8e-20 99.8 62 75.8
HanXRQChr10g0283591 Helianthus annuus HOM05D007549 ORTHO05D009532 8.8e-20 99.8 62 75.8
Oeu062831.1 Olea europaea HOM05D007549 ORTHO05D009532 8.8e-20 99.8 68 76.5
Lalb_Chr23g0274351 Lupinus albus HOM05D007549 ORTHO05D009532 5.7e-19 97.1 51 96.1
ClCG02G007770 Citrullus lanatus HOM05D007549 ORTHO05D009532 2.2e-18 95.1 68 73.5
HanXRQChr11g0331601 Helianthus annuus HOM05D007549 ORTHO05D009532 7.7e-16 86.7 67 62.7
BolC4t25867H Brassica oleracea HOM05D007549 ORTHO05D009532 2.9e-15 84.7 57 71.9
Gohir.D07G173850 Gossypium hirsutum HOM05D007549 ORTHO05D009532 3.8e-15 84.3 68 60.3
Gohir.D11G296624 Gossypium hirsutum HOM05D007549 ORTHO05D009532 3.8e-15 84.3 68 63.2
Gorai.007G320000 Gossypium raimondii HOM05D007549 ORTHO05D009532 3.8e-15 84.3 68 63.2
Gorai.001G194300 Gossypium raimondii HOM05D007549 ORTHO05D009532 1.9e-14 82.0 68 58.8
HanXRQChr00c0557g0575791 Helianthus annuus HOM05D007549 ORTHO05D009532 2.5e-14 81.6 52 75.0
HanXRQChr16g0529021 Helianthus annuus HOM05D007549 ORTHO05D009532 2.5e-14 81.6 48 79.2
TPR.G34467 Trifolium pratense HOM05D007549 ORTHO05D009532 1.2e-13 79.3 51 76.5
Gorai.010G129600 Gossypium raimondii HOM05D007549 ORTHO05D009532 2.3e-12 75.1 68 58.8
Hund31442 Selenicereus undatus HOM05D007549 ORTHO05D009532 3.4e-11 71.2 54 68.5
Gohir.D06G113650 Gossypium hirsutum HOM05D007549 ORTHO05D009532 4.8e-10 67.4 68 55.9
Gohir.D11G284350 Gossypium hirsutum HOM05D007549 ORTHO05D009532 6.3e-10 67.0 68 55.9
Gohir.A07G175856 Gossypium hirsutum HOM05D007549 ORTHO05D009532 2.4e-09 65.1 68 54.4
MCO12G297 Micromonas commoda HOM05D007549 ORTHO05D009532 2.0e-08 62.0 67 47.8
PRCOL_00001223 Prasinoderma coloniale HOM05D007549 ORTHO05D009532 3.5e-08 61.2 67 49.3
Nitab4.5_0011882g0050 Nicotiana tabacum HOM05D008505 ORTHO05D010735 7.7e-08 60.1 39 79.5
BraSC58t46430Z Brassica rapa HOM05D007549 ORTHO05D009532 5.0e-07 57.4 38 71.1
Cre10.g462950 Chlamydomonas reinhardtii HOM05D007549 ORTHO05D009532 3.3e-06 54.7 66 43.9


User provided reference genes

Program Settings