Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr17g0349121 Lupinus albus HOM05D005917 ORTHO05D007517 9.2e-295 1016.1 516 100.0
Ca_06463_v3 Cicer arietinum L. HOM05D005917 ORTHO05D007517 5.2e-221 771.2 519 79.8
Glyma.14G006700 Glycine max HOM05D005917 ORTHO05D007517 8.8e-221 770.4 515 80.0
Psat0s736g0080 Pisum sativum HOM05D005917 ORTHO05D007517 2.0e-220 769.2 518 79.3
Medtr5g097510 Medicago truncatula HOM05D005917 ORTHO05D007517 3.3e-220 768.5 520 79.6
TPR.G15058 Trifolium pratense HOM05D005917 ORTHO05D007517 2.2e-219 765.8 518 79.9
arahy.Tifrunner.gnm1.ann1.V8M1HU Arachis hypogaea HOM05D005917 ORTHO05D007517 1.4e-218 763.1 520 78.5
Glyma.02G306400 Glycine max HOM05D005917 ORTHO05D007517 5.3e-218 761.1 515 79.0
LjContig00081g0012334 Lotus japonicus HOM05D005917 ORTHO05D007517 6.5e-216 754.2 526 77.4
VMungo0647G1382 Vigna mungo HOM05D005917 ORTHO05D007517 2.7e-214 748.8 515 78.3
arahy.Tifrunner.gnm1.ann1.410RPC Arachis hypogaea HOM05D005917 ORTHO05D007517 4.7e-214 748.0 513 78.4
Phvul.008G286200 Phaseolus vulgaris HOM05D005917 ORTHO05D007517 1.8e-213 746.1 517 77.4
QL08p028769 Quercus lobata HOM05D005917 ORTHO05D007517 2.4e-202 709.1 518 73.6
Duzib133G0758 Durio zibethinus HOM05D005917 ORTHO05D007517 9.2e-202 707.2 515 72.6
Thecc.01G189700 Theobroma cacao HOM05D005917 ORTHO05D007517 4.5e-201 704.9 516 72.5
CiPaw.04G195700 Carya illinoinensis HOM05D005917 ORTHO05D007517 1.0e-200 703.7 521 72.9
Gorai.007G167200 Gossypium raimondii HOM05D005917 ORTHO05D007517 2.9e-200 702.2 523 71.1
Gohir.A11G150200 Gossypium hirsutum HOM05D005917 ORTHO05D007517 4.3e-199 698.4 523 70.7
Gohir.D11G156700 Gossypium hirsutum HOM05D005917 ORTHO05D007517 7.3e-199 697.6 525 70.7
Cfa014247 Carpinus fangiana HOM05D005917 ORTHO05D007517 1.6e-198 696.4 516 72.5
Manes.13G063400 Manihot esculenta HOM05D005917 ORTHO05D007517 1.2e-196 690.3 520 71.7
COL.COLO4_33026 Corchorus olitorius HOM05D005917 ORTHO05D007517 2.0e-196 689.5 520 73.1
ClCG02G002680 Citrullus lanatus HOM05D005917 ORTHO05D007517 1.8e-194 682.9 526 70.5
Haze_12696 Corylus avellana HOM05D005917 ORTHO05D007517 7.0e-194 681.0 509 71.7
Sabra02G0169500 Salix brachista HOM05D005917 ORTHO05D007517 9.2e-194 680.6 522 69.7
CsaV3_7G002690 Cucumis sativus L. HOM05D005917 ORTHO05D007517 1.2e-193 680.2 520 71.0
Cpa.g.sc136.15 Carica papaya HOM05D005917 ORTHO05D007517 3.5e-193 678.7 526 70.2
Ciclev10014942m.g Citrus clementina HOM05D005917 ORTHO05D007517 1.0e-192 677.2 522 68.2
THA.LOC104802624 Tarenaya hassleriana HOM05D005917 ORTHO05D007517 1.7e-192 676.4 520 70.4
TWI36G1171 Tripterygium wilfordii HOM05D005917 ORTHO05D007517 1.5e-191 673.3 522 70.1
Potri.002G222100 Populus trichocarpa HOM05D005917 ORTHO05D007517 1.9e-191 672.9 522 68.2
Sed0016848 Sechium edule HOM05D005917 ORTHO05D007517 4.7e-190 668.3 524 69.3
MD09G1121500 Malus domestica HOM05D005917 ORTHO05D007517 6.2e-190 667.9 518 71.0
TWI18G0259 Tripterygium wilfordii HOM05D005917 ORTHO05D007517 2.3e-189 666.0 518 69.7
Aa31LG5G18370 Aethionema arabicum HOM05D005917 ORTHO05D007517 5.8e-188 661.4 521 68.1
Thhalv10022183m.g Eutrema salsugineum HOM05D005917 ORTHO05D007517 2.2e-187 659.4 510 70.2
PGR042G1386 Punica granatum HOM05D005917 ORTHO05D007517 1.1e-186 657.1 517 70.6
EL10Ac9g22738 Beta vulgaris HOM05D005917 ORTHO05D007517 4.1e-186 655.2 519 69.4
Prupe.3G202200 Prunus persica HOM05D005917 ORTHO05D007517 9.2e-186 654.1 519 70.1
Atru.chr6.3353 Acer truncatum HOM05D005917 ORTHO05D007517 1.6e-185 653.3 521 69.3
Eucgr.K00656 Eucalyptus grandis HOM05D005917 ORTHO05D007517 1.6e-185 653.3 518 68.0
Potri.014G164200 Populus trichocarpa HOM05D005917 ORTHO05D007517 1.3e-184 650.2 526 66.0
AL3G19160 Arabidopsis lyrata HOM05D005917 ORTHO05D007517 2.3e-184 649.4 511 68.7
Lj1P791T65 Lonicera japonica HOM05D005917 ORTHO05D007517 3.0e-184 649.0 521 68.1
Hma1.2p1_0405F.1_g145810 Hydrangea macrophylla HOM05D005917 ORTHO05D007517 3.9e-184 648.7 518 67.6
Manes.12G062101 Manihot esculenta HOM05D005917 ORTHO05D007517 6.6e-184 647.9 518 67.8
Cc02_g11180 Coffea canephora HOM05D005917 ORTHO05D007517 1.1e-183 647.1 539 67.0
CAN.G854.3 Capsicum annuum HOM05D005917 ORTHO05D007517 3.3e-183 645.6 521 67.6
MD17G1112500 Malus domestica HOM05D005917 ORTHO05D007517 3.3e-183 645.6 518 69.3
Nn1g08522 Nelumbo nucifera HOM05D005917 ORTHO05D007517 9.5e-183 644.0 524 67.2
Sp3g06720 Schrenkiella parvula HOM05D005917 ORTHO05D007517 1.2e-182 643.7 511 68.5
Sopen07g024410 Solanum pennellii HOM05D005917 ORTHO05D007517 2.1e-182 642.9 520 66.2
AT3G07790 Arabidopsis thaliana HOM05D005917 ORTHO05D007517 8.1e-182 641.0 516 67.6
Sc21g0000840 Simmondsia chinensis HOM05D005917 ORTHO05D007517 8.1e-182 641.0 516 67.2
Solyc07g047980.3 Solanum lycopersicum HOM05D005917 ORTHO05D007517 1.8e-181 639.8 523 66.2
Peaxi162Scf00776g00033 Petunia axillaris HOM05D005917 ORTHO05D007517 6.8e-181 637.9 516 67.1
PGSC0003DMG400006133 Solanum tuberosum HOM05D005917 ORTHO05D007517 6.8e-181 637.9 520 65.6
vmacro12107 Vaccinium macrocarpon HOM05D005917 ORTHO05D007517 6.8e-181 637.9 518 66.6
CARHR082500 Cardamine hirsuta HOM05D005917 ORTHO05D007517 8.9e-181 637.5 511 68.1
FvH4_6g41230 Fragaria vesca HOM05D005917 ORTHO05D007517 2.0e-180 636.3 522 68.2
SHI10119 Sapria himalayana HOM05D005917 ORTHO05D007517 2.0e-180 636.3 521 65.5
FAN05G4769 Fragaria x ananassa HOM05D005917 ORTHO05D007517 2.6e-180 636.0 521 68.5
Nitab4.5_0005699g0010 Nicotiana tabacum HOM05D005917 ORTHO05D007517 2.6e-180 636.0 525 66.7
Rhsim06G0173900 Rhododendron simsii HOM05D005917 ORTHO05D007517 3.4e-180 635.6 521 66.8
Ah.14g082780 Amaranthus hybridus HOM05D005917 ORTHO05D007517 7.5e-180 634.4 514 66.3
FAN09G3123 Fragaria x ananassa HOM05D005917 ORTHO05D007517 1.7e-179 633.3 522 68.2
FAN14G0404 Fragaria x ananassa HOM05D005917 ORTHO05D007517 2.2e-179 632.9 522 68.0
Nitab4.5_0000441g0160 Nicotiana tabacum HOM05D005917 ORTHO05D007517 8.3e-179 630.9 528 66.1
BolC1t05532H Brassica oleracea HOM05D005917 ORTHO05D007517 1.9e-178 629.8 513 66.9
BcaC09g47947 Brassica carinata HOM05D005917 ORTHO05D007517 4.1e-178 628.6 511 66.9
RcHm_v2.0_Chr2g0156781 Rosa chinensis HOM05D005917 ORTHO05D007517 2.1e-177 626.3 520 67.3
DCAR_019712 Daucus carota HOM05D005917 ORTHO05D007517 2.7e-177 625.9 523 64.1
TAR624G1058 Trochodendron aralioides HOM05D005917 ORTHO05D007517 2.7e-177 625.9 528 65.0
AUR62017525 Chenopodium quinoa HOM05D005917 ORTHO05D007517 4.6e-177 625.2 518 65.6
Dinv07857 Davidia involucrata HOM05D005917 ORTHO05D007517 6.0e-177 624.8 518 68.0
BraA01t04362Z Brassica rapa HOM05D005917 ORTHO05D007517 6.6e-176 621.3 510 66.3
Carub.0003s0737 Capsella rubella HOM05D005917 ORTHO05D007517 1.1e-175 620.5 516 66.3
Lsat_1_v5_gn_7_96161 Lactuca sativa HOM05D005917 ORTHO05D007517 1.5e-175 620.2 528 65.5
MBI16_g11554_MAGBIO Magnolia biondii HOM05D005917 ORTHO05D007517 2.5e-175 619.4 521 63.5
SGA_v2.0_scaffold302G47853 Striga asiatica HOM05D005917 ORTHO05D000086 6.2e-174 614.8 534 63.7
SalBow2G0814 Salvia bowleyana HOM05D005917 ORTHO05D007517 1.8e-173 613.2 526 63.9
MSTRG.14928 Avicennia marina HOM05D005917 ORTHO05D007517 2.4e-173 612.8 531 64.4
Aqoxy1G02033 Aquilegia oxysepala HOM05D005917 ORTHO05D007517 8.9e-173 610.9 521 63.3
SalBow2G2149 Salvia bowleyana HOM05D005917 ORTHO05D007517 2.0e-172 609.8 525 63.2
ECA236G4414 Erigeron canadensis HOM05D005917 ORTHO05D007517 2.6e-172 609.4 533 64.2
BolC5t34607H Brassica oleracea HOM05D005917 ORTHO05D007517 3.4e-172 609.0 509 66.0
C05p59510 Brassica napus HOM05D005917 ORTHO05D007517 2.2e-171 606.3 509 66.4
AUR62015069 Chenopodium quinoa HOM05D005917 ORTHO05D007517 3.8e-171 605.5 474 67.5
BcaC05g29571 Brassica carinata HOM05D005917 ORTHO05D007517 6.4e-171 604.7 511 65.4
HanXRQChr04g0126661 Helianthus annuus HOM05D005917 ORTHO05D007517 3.5e-169 599.0 523 64.1
PSO700G0235 Papaver somniferum HOM05D005917 ORTHO05D007517 6.0e-169 598.2 526 62.7
BraA05t22776Z Brassica rapa HOM05D005917 ORTHO05D007517 1.3e-168 597.0 510 65.5
A05p40430 Brassica napus HOM05D005917 ORTHO05D007517 3.0e-168 595.9 510 65.3
PSO761G0708 Papaver somniferum HOM05D005917 ORTHO05D007517 6.6e-168 594.7 526 61.8
Oeu012341.1 Olea europaea HOM05D005917 ORTHO05D007517 1.5e-164 583.6 527 61.5
Migut.M00025 Erythranthe guttata HOM05D005917 ORTHO05D007517 7.6e-164 581.3 529 61.8
FAN02G4512 Fragaria x ananassa HOM05D005917 ORTHO05D007517 1.7e-163 580.1 518 63.9
unitig_747.g21169 Utricularia gibba HOM05D005917 ORTHO05D007517 2.1e-161 573.2 527 59.0
TAR626G1403 Trochodendron aralioides HOM05D005917 ORTHO05D007517 2.5e-159 566.2 470 65.1
HPP92_002896 Vanilla planifolia HOM05D005917 ORTHO05D007517 2.1e-158 563.1 536 61.0
HPP92_002885 Vanilla planifolia HOM05D005917 ORTHO05D007517 2.6e-156 556.2 537 60.0
CDE02G0007 Ceratophyllum demersum HOM05D005917 ORTHO05D007517 3.4e-156 555.8 516 60.9
Actinidia09775 Actinidia chinensis HOM05D005917 ORTHO05D007517 3.0e-152 542.7 467 63.4
CSS0026358 Camellia sinensis var. sinensis HOM05D005917 ORTHO05D007517 1.1e-146 524.2 518 59.7
Os06g0502900 Oryza sativa ssp. japonica HOM05D005917 ORTHO05D007517 6.9e-141 505.0 530 55.1
Zm00001eb403830 Zea mays HOM05D005917 ORTHO05D007517 1.8e-136 490.3 526 54.6
Zm00001eb209420 Zea mays HOM05D005917 ORTHO05D007517 5.1e-136 488.8 528 53.8
Zm00001eb209430 Zea mays HOM05D005917 ORTHO05D007517 1.5e-135 487.3 525 54.3
SEGI_07273 Sequoiadendron giganteum HOM05D005917 ORTHO05D007517 1.2e-132 477.6 541 51.9
GSVIVG01030044001 Vitis vinifera HOM05D005917 ORTHO05D000188 3.8e-131 472.6 488 56.1
ATR0665G318 Amborella trichopoda HOM05D005917 ORTHO05D007517 1.2e-121 441.0 520 52.7
Manes.12G052600 Manihot esculenta HOM05D005917 ORTHO05D007517 6.7e-120 435.3 515 53.0
Mapoly0016s0028 Marchantia polymorpha HOM05D005917 ORTHO05D007517 5.0e-115 419.1 546 49.6
Pp3c5_28640 Physcomitrium patens HOM05D005917 ORTHO05D007517 8.5e-115 418.3 544 48.9
CDE09G1298 Ceratophyllum demersum HOM05D005917 ORTHO05D007517 9.7e-111 404.8 310 67.7
SMO347G0414 Selaginella moellendorffii HOM05D005917 ORTHO05D007517 1.2e-103 381.3 518 45.6
MELO3C024210.2 Cucumis melo HOM05D005917 ORTHO05D007517 2.8e-94 350.1 297 66.3
Migut.L01336 Erythranthe guttata HOM05D005917 ORTHO05D007517 3.5e-92 343.2 518 45.8
CBR_g39617 Chara braunii HOM05D005917 ORTHO05D007517 1.6e-89 334.3 569 42.2
HanXRQChr11g0328131 Helianthus annuus HOM05D005917 ORTHO05D007517 1.7e-54 218.0 288 46.2
Sed0013022 Sechium edule HOM05D005917 ORTHO05D007517 7.8e-52 209.1 201 61.2
AagrBONN_evm.TU.Sc2ySwM_344.1277 Anthoceros agrestis HOM05D005917 ORTHO05D007517 1.1e-48 198.7 347 38.0
TPR.G18819 Trifolium pratense HOM05D005917 ORTHO05D007517 4.0e-48 196.8 289 47.1
Cre11.g482050 Chlamydomonas reinhardtii HOM05D005917 ORTHO05D007517 2.0e-23 114.8 484 25.4
FAN14G5926 Fragaria x ananassa HOM05D005917 ORTHO05D007517 7.6e-23 112.8 83 68.7
Prupe.3G225800 Prunus persica HOM05D005917 ORTHO05D007517 7.6e-23 112.8 98 67.3
Manes.16G064350 Manihot esculenta HOM05D005917 ORTHO05D007517 1.2e-20 105.5 69 73.9
MCO15G396 Micromonas commoda HOM05D005917 ORTHO05D007517 2.3e-19 101.3 540 26.5
FAN02G4549 Fragaria x ananassa HOM05D005917 ORTHO05D007517 5.9e-15 86.7 54 72.2
Nn6g32049 Nelumbo nucifera HOM05D005917 ORTHO05D007517 1.9e-13 81.6 63 63.5
CAN.G244.10 Capsicum annuum HOM05D000180 ORTHO05D000099 2.5e-13 81.3 55 65.5
Nn6g32048 Nelumbo nucifera HOM05D005917 ORTHO05D007517 2.0e-10 71.6 81 54.3
Cfa024500 Carpinus fangiana HOM05D005917 ORTHO05D007517 7.4e-10 69.7 166 30.7


User provided reference genes

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