Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr17g0348621 Lupinus albus HOM05D005193 ORTHO05D006316 2.4e-287 991.5 499 100.0
arahy.Tifrunner.gnm1.ann1.K04HM7 Arachis hypogaea HOM05D005193 ORTHO05D006316 4.5e-206 721.5 504 74.6
LjContig00272g0004657 Lotus japonicus HOM05D005193 ORTHO05D006316 8.6e-205 717.2 493 74.2
Glyma.14G021300 Glycine max HOM05D005193 ORTHO05D006316 2.5e-204 715.7 492 74.8
VMungo0647G2043 Vigna mungo HOM05D005193 ORTHO05D006316 9.8e-201 703.7 492 73.6
Ca_11685_v3 Cicer arietinum L. HOM05D005193 ORTHO05D006316 2.7e-198 695.7 492 73.4
Phvul.008G270200 Phaseolus vulgaris HOM05D005193 ORTHO05D006316 3.5e-198 695.3 492 73.0
Medtr1g056460 Medicago truncatula HOM05D005193 ORTHO05D006316 5.6e-196 688.0 492 71.7
arahy.Tifrunner.gnm1.ann1.J5TE7C Arachis hypogaea HOM05D005193 ORTHO05D006316 1.6e-195 686.4 504 71.8
Psat6g078440 Pisum sativum HOM05D005193 ORTHO05D006316 9.8e-193 677.2 492 71.3
QL08p009116 Quercus lobata HOM05D005193 ORTHO05D006316 1.3e-173 613.6 496 63.1
Dinv40781 Davidia involucrata HOM05D005193 ORTHO05D006316 8.6e-173 610.9 494 62.6
Prupe.4G218100 Prunus persica HOM05D005193 ORTHO05D006316 3.1e-170 602.4 514 60.7
FvH4_3g23170 Fragaria vesca HOM05D005193 ORTHO05D006316 5.4e-167 591.7 515 59.6
CiPaw.11G192300 Carya illinoinensis HOM05D005193 ORTHO05D006316 2.7e-166 589.3 495 62.2
arahy.Tifrunner.gnm1.ann1.6PV7EE Arachis hypogaea HOM05D005193 ORTHO05D006316 4.6e-166 588.6 422 73.7
Potri.001G356700 Populus trichocarpa HOM05D005193 ORTHO05D006316 6.0e-166 588.2 501 62.3
TPR.G2822 Trifolium pratense HOM05D005193 ORTHO05D006316 6.0e-166 588.2 487 63.4
Ciclev10007388m.g Citrus clementina HOM05D005193 ORTHO05D006316 6.6e-165 584.7 500 60.0
TAR627G0707 Trochodendron aralioides HOM05D005193 ORTHO05D006316 1.1e-164 583.9 499 61.1
RhsimUnG0248800 Rhododendron simsii HOM05D005193 ORTHO05D006316 1.5e-164 583.6 498 59.2
TWI38G1184 Tripterygium wilfordii HOM05D005193 ORTHO05D006316 3.3e-164 582.4 516 58.1
vmacro09699 Vaccinium macrocarpon HOM05D005193 ORTHO05D006316 2.1e-163 579.7 497 59.0
FAN11G0281 Fragaria x ananassa HOM05D005193 ORTHO05D006316 1.8e-162 576.6 529 57.5
Gohir.D01G069100 Gossypium hirsutum HOM05D005193 ORTHO05D006316 1.8e-162 576.6 514 58.4
MD03G1197400 Malus domestica HOM05D005193 ORTHO05D006316 1.8e-162 576.6 514 58.4
Atru.chr2.3490 Acer truncatum HOM05D005193 ORTHO05D006316 4.0e-162 575.5 456 63.4
Gohir.A01G082500 Gossypium hirsutum HOM05D005193 ORTHO05D006316 4.4e-161 572.0 501 59.3
Actinidia10743 Actinidia chinensis HOM05D005193 ORTHO05D006316 9.9e-161 570.9 498 58.8
Thecc.07G032100 Theobroma cacao HOM05D005193 ORTHO05D006316 1.7e-160 570.1 501 59.7
FAN16G1885 Fragaria x ananassa HOM05D005193 ORTHO05D006316 4.9e-160 568.5 515 57.9
Gorai.002G091400 Gossypium raimondii HOM05D005193 ORTHO05D006316 1.4e-159 567.0 502 59.2
Hma1.2p1_0036F.1_g023390 Hydrangea macrophylla HOM05D005193 ORTHO05D006316 1.6e-158 563.5 474 60.3
Sabra16G0234700 Salix brachista HOM05D005193 ORTHO05D006316 1.0e-157 560.8 513 57.9
FAN21G2135 Fragaria x ananassa HOM05D005193 ORTHO05D006316 3.3e-156 555.8 514 57.0
RcHm_v2.0_Chr5g0040821 Rosa chinensis HOM05D005193 ORTHO05D006316 5.6e-156 555.1 514 56.8
Nn1g03454 Nelumbo nucifera HOM05D005193 ORTHO05D006316 5.3e-154 548.5 499 57.5
Duzib268G1225 Durio zibethinus HOM05D005193 ORTHO05D006316 2.0e-153 546.6 501 57.7
CANSAT11G2467 Cannabis sativa HOM05D005193 ORTHO05D006316 5.1e-149 531.9 502 56.4
FAN25G0346 Fragaria x ananassa HOM05D005193 ORTHO05D006316 1.5e-148 530.4 595 51.4
Haze_09711 Corylus avellana HOM05D005193 ORTHO05D006316 5.3e-146 521.9 392 66.3
FAN25G2894 Fragaria x ananassa HOM05D005193 ORTHO05D006316 1.2e-142 510.8 550 52.2
COL.COLO4_09693 Corchorus olitorius HOM05D005193 ORTHO05D006316 2.1e-142 510.0 523 53.3
Nitab4.5_0000168g0220 Nicotiana tabacum HOM05D005193 ORTHO05D006316 6.0e-142 508.4 502 52.8
PSO210G7537 Papaver somniferum HOM05D005193 ORTHO05D006316 4.3e-140 502.3 502 53.8
Cc05_g14020 Coffea canephora HOM05D005193 ORTHO05D006316 2.8e-139 499.6 500 51.6
Sopen12g001090 Solanum pennellii HOM05D005193 ORTHO05D006316 4.1e-138 495.7 516 53.3
PSO832G1529 Papaver somniferum HOM05D005193 ORTHO05D006316 5.3e-138 495.4 501 53.7
CsaV3_7G021980 Cucumis sativus L. HOM05D005193 ORTHO05D006316 2.6e-137 493.0 506 51.0
MELO3C013149.2 Cucumis melo HOM05D005193 ORTHO05D006316 3.4e-137 492.7 495 52.3
ECA236G2682 Erigeron canadensis HOM05D005193 ORTHO05D006316 2.2e-136 490.0 507 50.7
Lsat_1_v5_gn_7_111080 Lactuca sativa HOM05D005193 ORTHO05D006316 2.9e-136 489.6 504 49.6
MSTRG.6941 Avicennia marina HOM05D005193 ORTHO05D006316 3.8e-136 489.2 515 50.9
Migut.M01736 Erythranthe guttata HOM05D005193 ORTHO05D006316 5.5e-135 485.3 501 50.5
Aqoxy4G01697 Aquilegia oxysepala HOM05D005193 ORTHO05D006316 3.5e-134 482.6 504 51.6
Aqoxy1G03394 Aquilegia oxysepala HOM05D005193 ORTHO05D006316 3.0e-133 479.6 505 51.7
MBI07_g09089_MAGBIO Magnolia biondii HOM05D005193 ORTHO05D006316 3.9e-133 479.2 506 51.8
PGR031G1204 Punica granatum HOM05D005193 ORTHO05D006316 5.1e-133 478.8 485 51.5
Manes.15G068700 Manihot esculenta HOM05D005193 ORTHO05D006316 1.5e-132 477.2 380 62.9
Oeu041839.1 Olea europaea HOM05D005193 ORTHO05D006316 3.3e-132 476.1 431 55.9
Sed0015549 Sechium edule HOM05D005193 ORTHO05D006316 1.6e-131 473.8 496 51.0
HanXRQChr11g0335911 Helianthus annuus HOM05D005193 ORTHO05D006316 3.8e-128 462.6 451 51.7
Hund02018 Selenicereus undatus HOM05D005193 ORTHO05D006316 3.2e-127 459.5 531 47.3
AT1G50730 Arabidopsis thaliana HOM05D005193 ORTHO05D006316 1.7e-123 447.2 499 48.7
Carub.0001s3976 Capsella rubella HOM05D005193 ORTHO05D006316 2.2e-123 446.8 494 48.0
CSS0020168 Camellia sinensis var. sinensis HOM05D005193 ORTHO05D006316 6.3e-123 445.3 405 57.3
BraA06t23495Z Brassica rapa HOM05D005193 ORTHO05D006316 1.4e-122 444.1 507 48.1
Sp1g37570 Schrenkiella parvula HOM05D005193 ORTHO05D006316 2.4e-122 443.4 498 48.4
THA.LOC104816145 Tarenaya hassleriana HOM05D005193 ORTHO05D006316 9.1e-122 441.4 494 47.6
CARHR040830 Cardamine hirsuta HOM05D005193 ORTHO05D006316 1.3e-120 437.6 495 47.5
GSVIVG01037690001 Vitis vinifera HOM05D005193 ORTHO05D006316 1.9e-119 433.7 332 63.6
Peaxi162Scf00660g00118 Petunia axillaris HOM05D005193 ORTHO05D006316 2.1e-118 430.3 436 52.8
Ah.06g182590 Amaranthus hybridus HOM05D005193 ORTHO05D006316 3.6e-118 429.5 509 48.1
Nitab4.5_0003450g0040 Nicotiana tabacum HOM05D005193 ORTHO05D006316 4.8e-115 419.1 483 48.4
Aa31LG10G3620 Aethionema arabicum HOM05D005193 ORTHO05D006316 6.3e-115 418.7 495 46.5
BcaB07g33512 Brassica carinata HOM05D005193 ORTHO05D006316 6.3e-115 418.7 497 47.3
C06p05990 Brassica napus HOM05D005193 ORTHO05D006316 4.1e-114 416.0 503 46.7
A06p02890 Brassica napus HOM05D005193 ORTHO05D006316 2.6e-113 413.3 503 46.5
BcaC08g43253 Brassica carinata HOM05D005193 ORTHO05D006316 3.5e-113 412.9 502 46.4
Eucgr.F03483 Eucalyptus grandis HOM05D005193 ORTHO05D006316 8.0e-110 401.7 383 54.0
AUR62020399 Chenopodium quinoa HOM05D005193 ORTHO05D006316 3.3e-108 396.4 466 47.6
HPP92_008858 Vanilla planifolia HOM05D005193 ORTHO05D006316 3.8e-104 382.9 477 44.4
ATR0585G046 Amborella trichopoda HOM05D005193 ORTHO05D006316 5.0e-104 382.5 373 52.5
Thhalv10011218m.g Eutrema salsugineum HOM05D005193 ORTHO05D006316 1.3e-99 367.9 516 43.0
Cpa.g.sc12.274 Carica papaya HOM05D005193 ORTHO05D006316 2.8e-99 366.7 390 51.8
ClCG09G010950 Citrullus lanatus HOM05D005193 ORTHO05D006316 4.1e-98 362.8 412 48.5
BolC6t35712H Brassica oleracea HOM05D005193 ORTHO05D006316 2.2e-96 357.1 533 41.8
AUR62015820 Chenopodium quinoa HOM05D005193 ORTHO05D006316 2.5e-95 353.6 500 41.8
AagrBONN_evm.TU.Sc2ySwM_344.2169 Anthoceros agrestis HOM05D005193 ORTHO05D006316 4.9e-91 339.3 514 38.7
Pp3c16_8580 Physcomitrium patens HOM05D005193 ORTHO05D006316 1.9e-87 327.4 434 41.0
CDE02G4624 Ceratophyllum demersum HOM05D005193 ORTHO05D006316 1.2e-86 324.7 371 47.4
Mapoly0038s0063 Marchantia polymorpha HOM05D005193 ORTHO05D006316 5.4e-82 309.3 447 38.5
Lj1C877G9 Lonicera japonica HOM05D005193 ORTHO05D006316 1.5e-79 301.2 268 58.2
SMO115G0237 Selaginella moellendorffii HOM05D005193 ORTHO05D006316 3.3e-79 300.1 515 36.3
CBR_g49709 Chara braunii HOM05D005193 ORTHO05D000048 3.7e-67 260.0 459 35.9
arahy.Tifrunner.gnm1.ann1.DP08C5 Arachis hypogaea HOM05D005193 ORTHO05D006316 4.1e-66 256.5 250 57.6
arahy.Tifrunner.gnm1.ann1.SW2PFC Arachis hypogaea HOM05D005193 ORTHO05D006316 4.1e-66 256.5 250 57.6
Lj1C877G15 Lonicera japonica HOM05D005193 ORTHO05D006316 1.3e-64 251.5 258 53.1
Lsat_1_v5_gn_6_67380 Lactuca sativa HOM05D005193 ORTHO05D006316 2.2e-43 181.0 190 50.0
Lsat_1_v5_gn_9_67960 Lactuca sativa HOM05D005193 ORTHO05D006316 2.2e-43 181.0 190 50.0
AUR62015822 Chenopodium quinoa HOM05D005193 ORTHO05D006316 6.9e-37 159.5 314 34.1
AagrBONN_evm.TU.Sc2ySwM_362.1473 Anthoceros agrestis HOM05D005193 ORTHO05D006316 3.5e-25 120.6 110 55.5
Sabra06G0024500 Salix brachista HOM05D005193 ORTHO05D006316 3.9e-24 117.1 84 67.9
EL10Ac4g07765 Beta vulgaris HOM05D005193 ORTHO05D006316 1.5e-23 115.2 185 41.6
Sabra16G0098300 Salix brachista HOM05D005193 ORTHO05D006316 2.5e-23 114.4 82 68.3
CDE02G0065 Ceratophyllum demersum HOM05D005193 ORTHO05D006316 2.1e-17 94.7 98 44.9
TPR.G2800 Trifolium pratense HOM05D005193 ORTHO05D006316 3.6e-17 94.0 107 51.4
Haze_09712 Corylus avellana HOM05D005193 ORTHO05D006316 2.3e-16 91.3 115 50.4
Cpa.g.sc12.273 Carica papaya HOM05D005193 ORTHO05D006316 1.1e-15 89.0 110 48.2
CAN.G1219.2 Capsicum annuum HOM05D005193 ORTHO05D006316 4.3e-15 87.0 96 50.0
CSS0047254 Camellia sinensis var. sinensis HOM05D005193 ORTHO05D006316 1.3e-14 85.5 117 46.2
MD16G1253600 Malus domestica HOM05D005193 ORTHO05D006316 3.1e-13 80.9 64 62.5
GSVIVG01037691001 Vitis vinifera HOM05D005193 ORTHO05D006316 3.8e-11 73.9 108 45.4
arahy.Tifrunner.gnm1.ann1.89LBMG Arachis hypogaea HOM05D005193 ORTHO05D006316 5.5e-10 70.1 68 57.4
Eucgr.F03486 Eucalyptus grandis HOM05D005193 ORTHO05D006316 1.6e-09 68.6 109 41.3
SEGI_12195 Sequoiadendron giganteum HOM05D005193 ORTHO05D006316 2.0e-07 61.6 82 39.0


User provided reference genes

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