Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr17g0348611 Lupinus albus HOM05D008051 ORTHO05D009905 1.1e-71 273.5 168 100.0
Lalb_Chr04g0248291 Lupinus albus HOM05D008051 ORTHO05D009905 1.5e-36 156.8 174 69.5
Glyma.14G021900 Glycine max HOM05D008051 ORTHO05D009905 1.3e-16 90.5 153 55.6
Glyma.18G093000 Glycine max HOM05D008051 ORTHO05D009905 1.1e-15 87.4 101 49.5
TPR.G24073 Trifolium pratense HOM05D008051 ORTHO05D009905 1.2e-14 84.0 94 43.6
arahy.Tifrunner.gnm1.ann1.QA2XZ5 Arachis hypogaea HOM05D008051 ORTHO05D009905 1.6e-14 83.6 104 43.3
Glyma.02G292700 Glycine max HOM05D008051 ORTHO05D009905 2.8e-14 82.8 152 52.0
Phvul.008G269500 Phaseolus vulgaris HOM05D008051 ORTHO05D009905 4.7e-14 82.0 140 57.1
Cfa012978 Carpinus fangiana HOM05D008051 ORTHO05D009905 1.4e-13 80.5 46 65.2
Oeu021430.1 Olea europaea HOM05D008051 ORTHO05D009905 4.0e-13 79.0 57 59.6
TPR.G33768 Trifolium pratense HOM05D008051 ORTHO05D009905 2.6e-12 76.3 100 40.0
Lalb_Chr15g0081481 Lupinus albus HOM05D008051 ORTHO05D009905 5.7e-12 75.1 103 46.6
Haze_21342 Corylus avellana HOM05D008051 ORTHO05D009905 7.5e-12 74.7 60 51.7
Dinv40787 Davidia involucrata HOM05D002089 ORTHO05D002848 1.3e-11 73.9 51 60.8
CAN.G407.107 Capsicum annuum HOM05D008051 ORTHO05D009905 1.7e-11 73.6 50 58.0
Haze_09724 Corylus avellana HOM05D008051 ORTHO05D009905 2.9e-11 72.8 60 51.7
DCAR_009646 Daucus carota HOM05D008051 ORTHO05D009905 3.7e-11 72.4 51 56.9
Medtr8g442670 Medicago truncatula HOM05D008051 ORTHO05D009905 3.7e-11 72.4 99 38.4
Medtr7g025060 Medicago truncatula HOM05D008051 ORTHO05D009905 4.9e-11 72.0 99 40.4
Ciclev10010548m.g Citrus clementina HOM05D008051 ORTHO05D009905 6.4e-11 71.6 57 56.1
Haze_21340 Corylus avellana HOM05D008051 ORTHO05D009905 6.4e-11 71.6 60 50.0
Medtr5g063040 Medicago truncatula HOM05D008051 ORTHO05D009905 1.1e-10 70.9 159 45.9
TPR.G1175 Trifolium pratense HOM05D008051 ORTHO05D009905 1.1e-10 70.9 58 50.0
Medtr7g074360 Medicago truncatula HOM05D008051 ORTHO05D009905 1.4e-10 70.5 97 42.3
Cfa020295 Carpinus fangiana HOM05D008051 ORTHO05D009905 1.8e-10 70.1 60 50.0
CANSAT11G0109 Cannabis sativa HOM05D008051 ORTHO05D009905 2.4e-10 69.7 99 39.4
VMungo0540G2374 Vigna mungo HOM05D008051 ORTHO05D009905 5.4e-10 68.6 46 54.3
Medtr7g074340 Medicago truncatula HOM05D008051 ORTHO05D009905 7.0e-10 68.2 97 41.2
Medtr7g074350 Medicago truncatula HOM05D008051 ORTHO05D009905 7.0e-10 68.2 97 41.2
Phvul.006G046600 Phaseolus vulgaris HOM05D008051 ORTHO05D009905 1.6e-09 67.0 96 38.5
Solyc03g116450.1 Solanum lycopersicum HOM05D008051 ORTHO05D009905 3.5e-09 65.9 100 34.0
vmacro21377 Vaccinium macrocarpon HOM05D008051 ORTHO05D009905 3.5e-09 65.9 45 55.6
LjContig00272g0004425 Lotus japonicus HOM05D008051 ORTHO05D009905 4.6e-09 65.5 111 36.0
QL08p007021 Quercus lobata HOM05D008051 ORTHO05D009905 4.6e-09 65.5 45 60.0
TPR.G1196 Trifolium pratense HOM05D008051 ORTHO05D009905 4.6e-09 65.5 85 40.0
PGSC0003DMG401000629 Solanum tuberosum HOM05D008051 ORTHO05D009905 7.8e-09 64.7 50 50.0
Eucgr.F00712 Eucalyptus grandis HOM05D008051 ORTHO05D009905 1.0e-08 64.3 47 55.3
Ah.04g166050 Amaranthus hybridus HOM05D000120 ORTHO05D002159 2.3e-08 63.2 46 52.2
Psat2g012240 Pisum sativum HOM05D008051 ORTHO05D009905 2.3e-08 63.2 69 33.3
CiPaw.11G193500 Carya illinoinensis HOM05D008051 ORTHO05D009905 3.0e-08 62.8 74 43.2
CSS0002609 Camellia sinensis var. sinensis HOM05D008051 ORTHO05D009905 3.9e-08 62.4 48 52.1
Rhsim06G0068300 Rhododendron simsii HOM05D008051 ORTHO05D009905 6.6e-08 61.6 100 36.0
SGA_v2.0_scaffold196G40891 Striga asiatica HOM05D008051 ORTHO05D009905 6.6e-08 61.6 47 55.3
Migut.N00262 Erythranthe guttata HOM05D008051 ORTHO05D009905 8.6e-08 61.2 46 63.0
Cpa.g.sc12.286 Carica papaya HOM05D008051 ORTHO05D009905 1.1e-07 60.8 58 50.0
Gohir.D01G070000 Gossypium hirsutum HOM05D008051 ORTHO05D009905 1.9e-07 60.1 51 49.0
Gorai.002G092500 Gossypium raimondii HOM05D008051 ORTHO05D009905 1.9e-07 60.1 51 49.0
Potri.001G355700 Populus trichocarpa HOM05D008051 ORTHO05D009905 1.9e-07 60.1 99 36.4
EL10Ac4g07747 Beta vulgaris HOM05D008051 ORTHO05D009905 3.3e-07 59.3 47 48.9
Duzib213G0687 Durio zibethinus HOM05D008051 ORTHO05D009905 3.3e-07 59.3 51 51.0
TWI39G0594 Tripterygium wilfordii HOM05D008051 ORTHO05D009905 3.3e-07 59.3 104 34.6
Lsat_1_v5_gn_5_3180 Lactuca sativa HOM05D008051 ORTHO05D009905 4.3e-07 58.9 50 52.0
COL.COLO4_09713 Corchorus olitorius HOM05D008051 ORTHO05D009905 7.3e-07 58.2 98 33.7
Medtr5g093370 Medicago truncatula HOM05D008051 ORTHO05D009905 7.3e-07 58.2 99 37.4
MBI18_g27147_MAGBIO Magnolia biondii HOM05D008051 ORTHO05D009905 9.5e-07 57.8 56 44.6
Sabra11G0071300 Salix brachista HOM05D008051 ORTHO05D009905 2.1e-06 56.6 108 32.4
PGR083G0962 Punica granatum HOM05D008051 ORTHO05D009905 2.8e-06 56.2 91 36.3
Medtr5g093340 Medicago truncatula HOM05D008051 ORTHO05D009905 3.6e-06 55.8 87 35.6
SGA_v2.0_scaffold196G40892 Striga asiatica HOM05D008051 ORTHO05D009905 3.6e-06 55.8 47 51.1
Atru.chr2.3503 Acer truncatum HOM05D007124 ORTHO05D008980 4.7e-06 55.5 52 50.0
Gohir.A01G083500 Gossypium hirsutum HOM05D008051 ORTHO05D009905 4.7e-06 55.5 92 34.8
HanXRQChr08g0233561 Helianthus annuus HOM05D008051 ORTHO05D009905 6.2e-06 55.1 103 38.8
RcHm_v2.0_Chr5g0041151 Rosa chinensis HOM05D008051 ORTHO05D009905 6.2e-06 55.1 111 31.5
Nn1g07253 Nelumbo nucifera HOM05D008051 ORTHO05D009905 8.0e-06 54.7 42 57.1
Thecc.07G029800 Theobroma cacao HOM05D008051 ORTHO05D009905 8.0e-06 54.7 95 35.8


User provided reference genes

Program Settings