Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr17g0348421 Lupinus albus HOM05D008272 ORTHO05D010429 4.0e-173 611.3 300 100.0
arahy.Tifrunner.gnm1.ann1.UDA7AK Arachis hypogaea HOM05D008272 ORTHO05D010429 7.6e-148 527.3 298 86.2
arahy.Tifrunner.gnm1.ann1.MV6CSW Arachis hypogaea HOM05D008272 ORTHO05D010429 1.7e-147 526.2 298 85.9
VMungo0647G0594 Vigna mungo HOM05D008272 ORTHO05D010429 1.2e-140 503.4 300 82.7
QL08p010511 Quercus lobata HOM05D008272 ORTHO05D010429 2.5e-135 485.7 299 75.3
CiPaw.12G129300 Carya illinoinensis HOM05D008272 ORTHO05D010429 2.4e-133 479.2 298 75.8
Potri.011G138900 Populus trichocarpa HOM05D008272 ORTHO05D010429 1.2e-132 476.9 298 75.5
Cpa.g.sc97.8 Carica papaya HOM05D008272 ORTHO05D010429 2.4e-130 469.2 299 73.2
Manes.15G072400 Manihot esculenta HOM05D008272 ORTHO05D010429 2.7e-129 465.7 298 73.5
Duzib170G0415 Durio zibethinus HOM05D008272 ORTHO05D010429 6.0e-129 464.5 298 71.8
Eucgr.F03464 Eucalyptus grandis HOM05D008272 ORTHO05D010429 6.0e-129 464.5 297 74.1
Thecc.07G038600 Theobroma cacao HOM05D008272 ORTHO05D010429 1.9e-127 459.5 299 71.6
GSVIVG01037640001 Vitis vinifera HOM05D008272 ORTHO05D010429 5.6e-127 458.0 317 68.8
Ciclev10008983m.g Citrus clementina HOM05D008272 ORTHO05D010429 3.6e-126 455.3 300 69.7
CiPaw.11G188800 Carya illinoinensis HOM05D008272 ORTHO05D010429 1.8e-125 453.0 297 72.1
ClCG10G005430 Citrullus lanatus HOM05D008272 ORTHO05D010429 2.4e-125 452.6 298 71.8
Eucgr.F00768 Eucalyptus grandis HOM05D008272 ORTHO05D010429 4.0e-125 451.8 298 71.5
Gohir.D01G066300 Gossypium hirsutum HOM05D008272 ORTHO05D010429 1.2e-124 450.3 300 69.0
MELO3C025383.2 Cucumis melo HOM05D008272 ORTHO05D010429 2.0e-124 449.5 297 72.1
Hund23252 Selenicereus undatus HOM05D008272 ORTHO05D010429 4.5e-124 448.4 343 65.0
CsaV3_3G005170 Cucumis sativus L. HOM05D008272 ORTHO05D010429 2.2e-123 446.0 297 71.7
Gohir.A01G079200 Gossypium hirsutum HOM05D008272 ORTHO05D010429 3.8e-123 445.3 300 69.7
RcHm_v2.0_Chr5g0039361 Rosa chinensis HOM05D008272 ORTHO05D010429 7.9e-121 437.6 298 69.5
Hund01995 Selenicereus undatus HOM05D008272 ORTHO05D010429 1.5e-119 433.3 255 78.0
Cc05_g13720 Coffea canephora HOM05D008272 ORTHO05D010429 6.2e-118 427.9 299 68.6
Hund14975 Selenicereus undatus HOM05D008272 ORTHO05D010429 4.5e-116 421.8 346 61.3
Lj1A872T54 Lonicera japonica HOM05D008272 ORTHO05D010429 3.8e-115 418.7 306 66.0
Haze_09670 Corylus avellana HOM05D008272 ORTHO05D010429 6.5e-115 417.9 298 66.8
Migut.M01769 Erythranthe guttata HOM05D008272 ORTHO05D010429 3.2e-114 415.6 248 77.8
Gorai.002G088200 Gossypium raimondii HOM05D008272 ORTHO05D010429 1.3e-112 410.2 300 64.0
Hma1.2p1_1162F.1_g262620 Hydrangea macrophylla HOM05D008272 ORTHO05D010429 9.6e-111 404.1 239 77.4
PGR083G1743 Punica granatum HOM05D008272 ORTHO05D010429 9.6e-111 404.1 297 64.6
PGR031G2232 Punica granatum HOM05D008272 ORTHO05D010429 2.8e-110 402.5 301 65.8
HPP92_011139 Vanilla planifolia HOM05D008272 ORTHO05D010429 9.0e-109 397.5 302 61.9
unitig_62.g23281 Utricularia gibba HOM05D008272 ORTHO05D010429 2.0e-108 396.4 256 71.9
EL10Ac4g07813 Beta vulgaris HOM05D008272 ORTHO05D010429 3.4e-108 395.6 288 64.9
ATR0752G027 Amborella trichopoda HOM05D008272 ORTHO05D010429 6.5e-107 391.3 298 63.8
FAN24G3338 Fragaria x ananassa HOM05D008272 ORTHO05D010429 1.4e-106 390.2 298 62.4
VMungo0540G1205 Vigna mungo HOM05D008272 ORTHO05D010429 7.4e-103 377.9 267 70.8
Duzib213G0361 Durio zibethinus HOM05D008272 ORTHO05D010429 1.6e-102 376.7 249 71.5
SMO119G0124 Selaginella moellendorffii HOM05D008272 ORTHO05D010429 2.5e-98 362.8 251 65.3
MBI02_g22115_MAGBIO Magnolia biondii HOM05D008272 ORTHO05D010429 4.2e-98 362.1 290 61.0
Os04g0625200 Oryza sativa ssp. japonica HOM05D008272 ORTHO05D010429 8.8e-96 354.4 214 75.7
COL.COLO4_09657 Corchorus olitorius HOM05D008272 ORTHO05D010429 4.2e-90 335.5 190 80.5
Thecc.07G038700 Theobroma cacao HOM05D008272 ORTHO05D010429 9.4e-90 334.3 191 79.6
Nn004s41404 Nelumbo nucifera HOM05D008272 ORTHO05D010429 2.7e-89 332.8 226 73.0
Sc16g0006090 Simmondsia chinensis HOM05D008272 ORTHO05D010429 3.7e-78 295.8 246 62.6
FvH4_2g04690 Fragaria vesca HOM05D008272 ORTHO05D010429 4.7e-73 278.9 298 49.7
Sc03g0008620 Simmondsia chinensis HOM05D008272 ORTHO05D010429 3.0e-72 276.2 190 68.9
MBI16_g12297_MAGBIO Magnolia biondii HOM05D008272 ORTHO05D010429 1.4e-69 267.3 190 67.9
CAN.G337.128 Capsicum annuum HOM05D008272 ORTHO05D010429 7.0e-69 265.0 283 50.5
Sabra11G0124700 Salix brachista HOM05D008272 ORTHO05D010429 4.9e-62 242.3 148 77.0
Sabra11G0124400 Salix brachista HOM05D008272 ORTHO05D010429 3.7e-54 216.1 137 75.9
MD11G1219100 Malus domestica HOM05D008272 ORTHO05D010429 2.3e-51 206.8 298 39.6
Phvul.L001633 Phaseolus vulgaris HOM05D008272 ORTHO05D010429 2.5e-50 203.4 118 80.5
unitig_578.g15997 Utricularia gibba HOM05D008272 ORTHO05D010429 1.0e-48 198.0 120 76.7
Oeu020117.1 Olea europaea HOM05D008272 ORTHO05D010429 1.2e-23 114.8 114 52.6
Cfa020968 Carpinus fangiana HOM05D008272 ORTHO05D010429 2.6e-23 113.6 62 74.2
arahy.Tifrunner.gnm1.ann1.39PYJI Arachis hypogaea HOM05D008272 ORTHO05D010429 1.0e-19 101.7 109 54.1
Mapoly0168s0025 Marchantia polymorpha HOM05D006248 ORTHO05D007896 2.0e-15 87.4 197 30.5
MSTRG.10698 Avicennia marina HOM05D006248 ORTHO05D007896 3.4e-15 86.7 162 34.0
HanXRQChr15g0490751 Helianthus annuus HOM05D006248 ORTHO05D007896 3.4e-15 86.7 184 33.2
MD03G1201900 Malus domestica HOM05D008272 ORTHO05D010429 7.6e-15 85.5 57 64.9
Lsat_1_v5_gn_4_165100 Lactuca sativa HOM05D006248 ORTHO05D007896 9.9e-15 85.1 195 33.3
SGA_v2.0_scaffold347G49562 Striga asiatica HOM05D006248 ORTHO05D007896 1.3e-14 84.7 162 34.6
Nitab4.5_0006523g0010 Nicotiana tabacum HOM05D006248 ORTHO05D007896 1.7e-14 84.3 186 31.7
SMO367G0591 Selaginella moellendorffii HOM05D006248 ORTHO05D007896 1.7e-14 84.3 145 33.8
Dinv41376 Davidia involucrata HOM05D000122 ORTHO05D000139 2.2e-14 84.0 183 32.2
PRCOL_00003374 Prasinoderma coloniale HOM05D008272 ORTHO05D010429 2.2e-14 84.0 147 32.7
Manes.14G143900 Manihot esculenta HOM05D006248 ORTHO05D007896 2.9e-14 83.6 131 35.1
PGR102G2393 Punica granatum HOM05D006248 ORTHO05D007896 2.9e-14 83.6 131 34.4
Lsat_1_v5_gn_2_85220 Lactuca sativa HOM05D006248 ORTHO05D007896 3.8e-14 83.2 185 33.0
PRCOL_00000503 Prasinoderma coloniale HOM05D006248 ORTHO05D007896 3.8e-14 83.2 123 35.0
Prupe.7G263300 Prunus persica HOM05D006248 ORTHO05D007896 3.8e-14 83.2 136 35.3
Migut.K00321 Erythranthe guttata HOM05D006248 ORTHO05D007896 4.9e-14 82.8 116 37.9
ATR0579G167 Amborella trichopoda HOM05D006248 ORTHO05D007896 6.4e-14 82.4 169 32.0
PGSC0003DMG402011138 Solanum tuberosum HOM05D006248 ORTHO05D007896 6.4e-14 82.4 212 31.1
AUR62015459 Chenopodium quinoa HOM05D006248 ORTHO05D007896 8.4e-14 82.0 176 31.2
ECA238G3803 Erigeron canadensis HOM05D006248 ORTHO05D007896 8.4e-14 82.0 179 30.7
Aa31LG2G19940 Aethionema arabicum HOM05D006248 ORTHO05D007896 1.1e-13 81.6 131 35.1
CANSAT80G0015 Cannabis sativa HOM05D006248 ORTHO05D007896 1.1e-13 81.6 131 35.1
CANSAT80G1584 Cannabis sativa HOM05D006248 ORTHO05D007896 1.1e-13 81.6 131 35.1
CDE11G0689 Ceratophyllum demersum HOM05D006248 ORTHO05D007896 1.1e-13 81.6 170 30.6
HanXRQChr14g0448981 Helianthus annuus HOM05D006248 ORTHO05D007896 1.1e-13 81.6 185 30.8
Peaxi162Scf00401g00615 Petunia axillaris HOM05D006248 ORTHO05D007896 1.4e-13 81.3 116 36.2
CAN.G160.64 Capsicum annuum HOM05D006248 ORTHO05D007896 1.9e-13 80.9 121 37.2
Ciclev10008803m.g Citrus clementina HOM05D006248 ORTHO05D007896 1.9e-13 80.9 184 28.8
GSVIVG01023612001 Vitis vinifera HOM05D006248 ORTHO05D007896 1.9e-13 80.9 116 35.3
CSS0008954 Camellia sinensis var. sinensis HOM05D006248 ORTHO05D007896 2.4e-13 80.5 116 37.1
Eucgr.C02495 Eucalyptus grandis HOM05D006248 ORTHO05D007896 2.4e-13 80.5 116 37.9
Oeu054273.3 Olea europaea HOM05D006248 ORTHO05D007896 2.4e-13 80.5 116 36.2
QL02p093323 Quercus lobata HOM05D006248 ORTHO05D007896 2.4e-13 80.5 189 30.2
Sed0021098 Sechium edule HOM05D006248 ORTHO05D007896 2.4e-13 80.5 131 33.6
CiPaw.15G168100 Carya illinoinensis HOM05D006248 ORTHO05D007896 3.2e-13 80.1 117 37.6
Cpa.g.sc46.160 Carica papaya HOM05D006248 ORTHO05D007896 4.2e-13 79.7 116 36.2
Cfa020823 Carpinus fangiana HOM05D006248 ORTHO05D007896 4.2e-13 79.7 116 36.2
FAN23G2094 Fragaria x ananassa HOM05D000238 ORTHO05D001043 4.2e-13 79.7 136 35.3
PSO384G3884 Papaver somniferum HOM05D006248 ORTHO05D007896 4.2e-13 79.7 189 30.7
Sed0009955 Sechium edule HOM05D006248 ORTHO05D007896 4.2e-13 79.7 183 28.4
Gohir.D05G054900 Gossypium hirsutum HOM05D006248 ORTHO05D007896 5.4e-13 79.3 116 36.2
Lalb_Chr08g0234181 Lupinus albus HOM05D006248 ORTHO05D007896 5.4e-13 79.3 131 35.1
MD15G1144400 Malus domestica HOM05D006248 ORTHO05D007896 5.4e-13 79.3 136 35.3
PRCOL_00006194 Prasinoderma coloniale HOM05D006248 ORTHO05D010429 5.4e-13 79.3 150 30.7
SalBow1G5186 Salvia bowleyana HOM05D006248 ORTHO05D007896 5.4e-13 79.3 116 36.2
arahy.Tifrunner.gnm1.ann1.73F3S2 Arachis hypogaea HOM05D006248 ORTHO05D007896 7.1e-13 79.0 184 29.3
EL10Ac3g05888 Beta vulgaris HOM05D006248 ORTHO05D007896 7.1e-13 79.0 184 30.4
CsaV3_4G030910 Cucumis sativus L. HOM05D006248 ORTHO05D007896 7.1e-13 79.0 131 32.1
Gohir.A05G053300 Gossypium hirsutum HOM05D006248 ORTHO05D007896 7.1e-13 79.0 116 35.3
Gorai.009G056600 Gossypium raimondii HOM05D006248 ORTHO05D007896 7.1e-13 79.0 116 35.3
Nitab4.5_0005147g0010 Nicotiana tabacum HOM05D006248 ORTHO05D007896 7.1e-13 79.0 186 30.6
RcHm_v2.0_Chr2g0085591 Rosa chinensis HOM05D006248 ORTHO05D007896 7.1e-13 79.0 136 35.3
Actinidia38318 Actinidia chinensis HOM05D006248 ORTHO05D007896 9.3e-13 78.6 183 30.1
arahy.Tifrunner.gnm1.ann1.35XGVT Arachis hypogaea HOM05D006248 ORTHO05D007896 9.3e-13 78.6 184 29.3
arahy.Tifrunner.gnm1.ann1.VIT8JQ Arachis hypogaea HOM05D006248 ORTHO05D007896 9.3e-13 78.6 131 33.6
Cc06_g14900 Coffea canephora HOM05D006248 ORTHO05D007896 9.3e-13 78.6 214 29.9
FAN26G2974 Fragaria x ananassa HOM05D000238 ORTHO05D007896 9.3e-13 78.6 136 35.3
Hund24368 Selenicereus undatus HOM05D006248 ORTHO05D007896 9.3e-13 78.6 184 30.4
ClCG02G020550 Citrullus lanatus HOM05D006248 ORTHO05D007896 1.2e-12 78.2 131 32.1
Haze_19202 Corylus avellana HOM05D006248 ORTHO05D007896 1.2e-12 78.2 184 29.3
MELO3C008959.2 Cucumis melo HOM05D006248 ORTHO05D007896 1.2e-12 78.2 131 32.1
CsaV3_2G008470 Cucumis sativus L. HOM05D006248 ORTHO05D007896 1.2e-12 78.2 131 32.1
Lj6g0025769 Lotus japonicus HOM05D006248 ORTHO05D007896 1.2e-12 78.2 116 35.3
Sc06g0007960 Simmondsia chinensis HOM05D006248 ORTHO05D007896 1.2e-12 78.2 131 35.1
Solyc07g005580.4 Solanum lycopersicum HOM05D006248 ORTHO05D007896 1.2e-12 78.2 184 29.9
Sopen07g001690 Solanum pennellii HOM05D006248 ORTHO05D007896 1.2e-12 78.2 184 29.9
TPR.G3534 Trifolium pratense HOM05D006248 ORTHO05D007896 1.2e-12 78.2 116 34.5
FvH4_1g00880 Fragaria vesca HOM05D006248 ORTHO05D007896 1.6e-12 77.8 136 35.3
Glyma.12G163500 Glycine max HOM05D006248 ORTHO05D007896 1.6e-12 77.8 189 30.2
vmacro16799 Vaccinium macrocarpon HOM05D006248 ORTHO05D007896 1.6e-12 77.8 116 34.5
Gorai.010G113400 Gossypium raimondii HOM05D006248 ORTHO05D007896 2.1e-12 77.4 142 32.4
BcaNung04566 Brassica carinata HOM05D006248 ORTHO05D007896 2.7e-12 77.0 183 30.1
CiPaw.16G110600 Carya illinoinensis HOM05D006248 ORTHO05D007896 2.7e-12 77.0 116 34.5
TWI09G0649 Tripterygium wilfordii HOM05D006248 ORTHO05D007896 2.7e-12 77.0 184 28.8
unitig_746.g26565 Utricularia gibba HOM05D006248 ORTHO05D007896 2.7e-12 77.0 121 33.9
Carub.0007s0999 Capsella rubella HOM05D006248 ORTHO05D007896 3.5e-12 76.6 187 30.5
CARHR238450 Cardamine hirsuta HOM05D006248 ORTHO05D007896 3.5e-12 76.6 187 30.5
Medtr5g043620 Medicago truncatula HOM05D006248 ORTHO05D007896 3.5e-12 76.6 116 34.5
Psat1g022520 Pisum sativum HOM05D006248 ORTHO05D007896 3.5e-12 76.6 116 34.5
AL7G21560 Arabidopsis lyrata HOM05D006248 ORTHO05D007896 4.6e-12 76.3 189 31.7
DCAR_019396 Daucus carota HOM05D006248 ORTHO05D007896 4.6e-12 76.3 184 28.8
Thhalv10025500m.g Eutrema salsugineum HOM05D006248 ORTHO05D007896 4.6e-12 76.3 131 35.1
Gohir.D06G098450 Gossypium hirsutum HOM05D006248 ORTHO05D007896 4.6e-12 76.3 142 32.4
MCO11G046 Micromonas commoda HOM05D006248 ORTHO05D007896 4.6e-12 76.3 159 28.3
PSO339G1376 Papaver somniferum HOM05D006248 ORTHO05D007896 4.6e-12 76.3 189 30.2
Rhsim01G0033000 Rhododendron simsii HOM05D006248 ORTHO05D007896 4.6e-12 76.3 116 33.6
Sp7g28450 Schrenkiella parvula HOM05D006248 ORTHO05D007896 4.6e-12 76.3 116 36.2
Atru.chr7.37 Acer truncatum HOM05D006248 ORTHO05D007896 6.0e-12 75.9 184 29.9
Ca_03171_v3 Cicer arietinum L. HOM05D006248 ORTHO05D007896 6.0e-12 75.9 116 33.6
Nn7g36251 Nelumbo nucifera HOM05D006248 ORTHO05D007896 6.0e-12 75.9 116 34.5
Thecc.09G029500 Theobroma cacao HOM05D006248 ORTHO05D007896 6.0e-12 75.9 186 29.6
A03p60090 Brassica napus HOM05D006248 ORTHO05D007896 7.9e-12 75.5 115 35.7
BraA03t15055Z Brassica rapa HOM05D006248 ORTHO05D007896 7.9e-12 75.5 115 35.7
Duzib168G1034 Durio zibethinus HOM05D006248 ORTHO05D007896 7.9e-12 75.5 116 32.8
Phvul.007G037000 Phaseolus vulgaris HOM05D006248 ORTHO05D007896 7.9e-12 75.5 116 34.5
Pp3c2_20500 Physcomitrium patens HOM05D006248 ORTHO05D007896 7.9e-12 75.5 216 25.5
BcaNung00567 Brassica carinata HOM05D006248 ORTHO05D007896 1.0e-11 75.1 115 35.7
C07p58030 Brassica napus HOM05D002357 ORTHO05D007896 1.0e-11 75.1 115 35.7
BolC7t46261H Brassica oleracea HOM05D006248 ORTHO05D007896 1.0e-11 75.1 115 35.7
Gohir.A06G097800 Gossypium hirsutum HOM05D006248 ORTHO05D007896 1.0e-11 75.1 131 32.8
Glyma.06G220300 Glycine max HOM05D006248 ORTHO05D007896 1.3e-11 74.7 186 29.0
Potri.006G183700 Populus trichocarpa HOM05D006248 ORTHO05D007896 1.3e-11 74.7 116 33.6
CBR_g21007 Chara braunii HOM05D006248 ORTHO05D007896 1.8e-11 74.3 118 32.2
Duzib187G1891 Durio zibethinus HOM05D006248 ORTHO05D007896 1.8e-11 74.3 184 28.3
THA.LOC104803540 Tarenaya hassleriana HOM05D006248 ORTHO05D007896 1.8e-11 74.3 183 29.5
HPP92_007369 Vanilla planifolia HOM05D006248 ORTHO05D007896 3.0e-11 73.6 116 34.5
Lj7A459G62 Lonicera japonica HOM05D006248 ORTHO05D007896 5.1e-11 72.8 183 28.4
MBI04_g39114_MAGBIO Magnolia biondii HOM05D006248 ORTHO05D007896 5.1e-11 72.8 116 35.3
Aqoxy2G03376 Aquilegia oxysepala HOM05D006248 ORTHO05D007896 6.7e-11 72.4 116 33.6
AT4G30580 Arabidopsis thaliana HOM05D006248 ORTHO05D007896 6.7e-11 72.4 189 30.7
Os10g0497100 Oryza sativa ssp. japonica HOM05D006248 ORTHO05D007896 8.7e-11 72.0 196 27.6
TAR374G0826 Trochodendron aralioides HOM05D006248 ORTHO05D007896 1.9e-10 70.9 116 32.8
SHI18557 Sapria himalayana HOM05D006248 ORTHO05D007896 2.1e-09 67.4 116 31.0
Actinidia27193 Actinidia chinensis HOM05D006248 ORTHO05D007896 3.6e-09 66.6 131 32.8
Hma1.2p1_0222F.1_g093600 Hydrangea macrophylla HOM05D006248 ORTHO05D007896 1.4e-08 64.7 142 28.9
Zm00001eb220920 Zea mays HOM05D006248 ORTHO05D007896 1.4e-08 64.7 115 30.4
Cre09.g398289 Chlamydomonas reinhardtii HOM05D006248 ORTHO05D007896 2.0e-07 60.8 142 27.5
COL.COLO4_18812 Corchorus olitorius HOM05D006248 ORTHO05D007896 2.9e-06 57.0 67 40.3
Sabra06G0139600 Salix brachista HOM05D006248 ORTHO05D007896 6.4e-06 55.8 94 33.0


User provided reference genes

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