Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr17g0348341 Lupinus albus HOM05D006994 ORTHO05D008229 0.0e+00 1477.2 744 100.0
Lalb_Chr04g0248671 Lupinus albus HOM05D006994 ORTHO05D008229 5.1e-312 1074.7 750 75.9
Glyma.02G288000 Glycine max HOM05D006994 ORTHO05D008229 5.0e-225 785.0 768 58.9
arahy.Tifrunner.gnm1.ann1.T2GFFQ Arachis hypogaea HOM05D006994 ORTHO05D008229 6.1e-223 778.1 766 58.0
arahy.Tifrunner.gnm1.ann1.0D28PY Arachis hypogaea HOM05D006994 ORTHO05D008229 1.8e-222 776.5 766 57.8
Glyma.14G026900 Glycine max HOM05D006994 ORTHO05D008229 1.1e-221 773.9 750 60.3
Phvul.008G190400 Phaseolus vulgaris HOM05D006994 ORTHO05D008229 3.4e-213 745.7 768 57.0
VMungo0647G0009 Vigna mungo HOM05D006994 ORTHO05D008229 2.0e-210 736.5 769 57.1
LjContig00310g0024424 Lotus japonicus HOM05D006994 ORTHO05D008229 9.5e-200 701.0 769 55.7
Ca_06289_v3 Cicer arietinum L. HOM05D006994 ORTHO05D008229 3.7e-196 689.1 762 53.9
TPR.G12670 Trifolium pratense HOM05D006994 ORTHO05D008229 1.9e-187 660.2 765 52.4
Medtr5g091810 Medicago truncatula HOM05D006994 ORTHO05D008229 3.9e-185 652.5 775 51.9
Psat0s1339g0080 Pisum sativum HOM05D006994 ORTHO05D008229 3.3e-184 649.4 766 53.1
Glyma.08G310800 Glycine max HOM05D006994 ORTHO05D008229 1.4e-171 607.4 760 50.3
Glyma.18G104900 Glycine max HOM05D006994 ORTHO05D008229 6.6e-169 598.6 783 49.6
Phvul.006G035100 Phaseolus vulgaris HOM05D006994 ORTHO05D008229 2.6e-157 560.1 740 49.6
VMungo0540G1807 Vigna mungo HOM05D006994 ORTHO05D008229 3.9e-137 493.0 739 45.7
arahy.Tifrunner.gnm1.ann1.0VWG63 Arachis hypogaea HOM05D006994 ORTHO05D008229 3.7e-103 380.2 764 41.6
arahy.Tifrunner.gnm1.ann1.EW4W42 Arachis hypogaea HOM05D006994 ORTHO05D008229 8.2e-103 379.0 746 41.4
Psat5g180160 Pisum sativum HOM05D006994 ORTHO05D008229 7.3e-75 286.2 310 55.5
QL08p043727 Quercus lobata HOM05D006994 ORTHO05D008229 6.0e-69 266.5 791 32.0
GSVIVG01000809001 Vitis vinifera HOM05D006994 ORTHO05D008229 2.0e-64 251.5 791 30.6
Prupe.3G170300 Prunus persica HOM05D006994 ORTHO05D008229 3.7e-63 247.3 804 30.8
Dinv12707 Davidia involucrata HOM05D006994 ORTHO05D008229 4.0e-57 227.3 788 29.4
Cfa022555 Carpinus fangiana HOM05D006994 ORTHO05D008229 1.7e-55 221.9 736 30.8
Atru.chr6.1474 Acer truncatum HOM05D006994 ORTHO05D008229 7.8e-53 213.0 778 30.5
Dinv06483 Davidia involucrata HOM05D006994 ORTHO05D008229 9.6e-51 206.1 783 29.9
TAR629G2429 Trochodendron aralioides HOM05D006994 ORTHO05D008229 9.6e-51 206.1 787 29.7
RcHm_v2.0_Chr2g0150941 Rosa chinensis HOM05D006994 ORTHO05D008229 4.4e-48 197.2 762 29.8
TAR627G0262 Trochodendron aralioides HOM05D006994 ORTHO05D008229 2.9e-47 194.5 785 29.0
FvH4_6g37820 Fragaria vesca HOM05D006994 ORTHO05D008229 1.6e-45 188.7 790 29.0
FAN14G2472 Fragaria x ananassa HOM05D006994 ORTHO05D008229 2.7e-45 188.0 780 30.0
Thecc.01G159900 Theobroma cacao HOM05D006994 ORTHO05D008229 6.6e-44 183.3 737 28.9
Psat5g180120 Pisum sativum HOM05D006994 ORTHO05D008229 1.5e-43 182.2 458 36.0
FAN02G4438 Fragaria x ananassa HOM05D006994 ORTHO05D008229 2.5e-43 181.4 785 29.7
CiPaw.03G188200 Carya illinoinensis HOM05D006994 ORTHO05D008229 3.3e-43 181.0 653 30.5
Duzib187G0002 Durio zibethinus HOM05D006994 ORTHO05D008229 2.1e-42 178.3 745 28.2
Ciclev10030533m.g Citrus clementina HOM05D006994 ORTHO05D008229 2.8e-42 177.9 758 28.1
FAN09G0855 Fragaria x ananassa HOM05D006994 ORTHO05D008229 3.1e-41 174.5 728 29.5
COL.COLO4_33721 Corchorus olitorius HOM05D006994 ORTHO05D008229 4.9e-39 167.2 741 28.2
Duzib147G0646 Durio zibethinus HOM05D006994 ORTHO05D008229 2.4e-38 164.9 779 26.8
CSS0008190 Camellia sinensis var. sinensis HOM05D006994 ORTHO05D008229 4.6e-37 160.6 788 27.8
Cpa.g.sc50.71 Carica papaya HOM05D006994 ORTHO05D008229 1.7e-36 158.7 785 27.9
MD09G1155600 Malus domestica HOM05D006994 ORTHO05D008229 1.1e-35 156.0 803 28.5
CANSAT64G1952 Cannabis sativa HOM05D006994 ORTHO05D008229 1.8e-33 148.7 736 28.0
Hma1.2p1_0036F.1_g023730 Hydrangea macrophylla HOM05D006994 ORTHO05D008229 1.5e-32 145.6 762 24.4
Gohir.A09G006700 Gossypium hirsutum HOM05D006994 ORTHO05D008229 5.1e-28 130.6 752 25.9
Gorai.006G007500 Gossypium raimondii HOM05D006994 ORTHO05D008229 7.4e-27 126.7 738 26.0
TWI59G0403 Tripterygium wilfordii HOM05D006994 ORTHO05D008229 1.3e-26 125.9 781 24.8
Gohir.D09G005900 Gossypium hirsutum HOM05D006994 ORTHO05D008229 1.6e-26 125.6 739 25.7
MD17G1141700 Malus domestica HOM05D006994 ORTHO05D008229 2.8e-26 124.8 523 27.7
Actinidia32524 Actinidia chinensis HOM05D006994 ORTHO05D008229 1.7e-23 115.5 773 23.7
Nn3g20985 Nelumbo nucifera HOM05D006994 ORTHO05D008229 1.1e-22 112.8 803 24.0
Actinidia11193 Actinidia chinensis HOM05D006994 ORTHO05D008229 1.9e-22 112.1 453 28.9
Rhsim06G0121200 Rhododendron simsii HOM05D006994 ORTHO05D008229 3.2e-22 111.3 778 24.6
vmacro23412 Vaccinium macrocarpon HOM05D006994 ORTHO05D008229 3.2e-22 111.3 763 24.8
Eucgr.A01960 Eucalyptus grandis HOM05D006994 ORTHO05D008229 2.1e-21 108.6 707 25.3
Manes.02G085800 Manihot esculenta HOM05D006994 ORTHO05D008229 9.6e-19 99.8 782 23.8
TPR.G2256 Trifolium pratense HOM05D006994 ORTHO05D008229 8.2e-18 96.7 399 29.1
Nn6g34417 Nelumbo nucifera HOM05D006994 ORTHO05D008229 1.2e-16 92.8 821 23.3
Medtr3g452530 Medicago truncatula HOM05D006994 ORTHO05D008229 5.1e-12 77.4 421 23.5
Aqoxy4G00195 Aquilegia oxysepala HOM05D006994 ORTHO05D008229 5.7e-11 73.9 427 26.5
Cc05_g09220 Coffea canephora HOM05D006994 ORTHO05D008229 7.4e-11 73.6 804 21.8
PGR042G2686 Punica granatum HOM05D006994 ORTHO05D008229 7.4e-11 73.6 724 25.4
PSO541G2047 Papaver somniferum HOM05D006994 ORTHO05D008229 9.7e-11 73.2 561 26.2
CsaV3_6G037970 Cucumis sativus L. HOM05D006994 ORTHO05D008229 8.2e-10 70.1 515 24.7
ClCG09G022300 Citrullus lanatus HOM05D006994 ORTHO05D008229 2.4e-09 68.6 510 24.7
PSO675G3324 Papaver somniferum HOM05D006994 ORTHO05D008229 6.9e-09 67.0 779 23.2
Psat4g063160 Pisum sativum HOM05D001507 ORTHO05D002108 3.8e-07 61.2 52 61.5
Lj1A585G38 Lonicera japonica HOM05D006994 ORTHO05D008229 4.2e-06 57.8 747 22.2
Peaxi162Scf00154g00620 Petunia axillaris HOM05D006994 ORTHO05D008229 9.4e-06 56.6 443 23.5


User provided reference genes

Program Settings