Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr17g0347681 Lupinus albus HOM05D007737 ORTHO05D009754 9.5e-69 263.5 140 100.0
LjContig00564g0006359 Lotus japonicus HOM05D007737 ORTHO05D009754 1.2e-55 219.9 140 83.6
Glyma.02G276300 Glycine max HOM05D007737 ORTHO05D009754 1.6e-52 209.5 140 80.7
Phvul.008G205200 Phaseolus vulgaris HOM05D007737 ORTHO05D009754 8.1e-52 207.2 140 80.0
arahy.Tifrunner.gnm1.ann1.BW18VB Arachis hypogaea HOM05D007737 ORTHO05D009754 2.3e-51 205.7 142 78.9
arahy.Tifrunner.gnm1.ann1.HH45UC Arachis hypogaea HOM05D007737 ORTHO05D009754 4.9e-49 198.0 140 75.7
arahy.Tifrunner.gnm1.ann1.J0MG2W Arachis hypogaea HOM05D007737 ORTHO05D009754 2.5e-45 185.7 140 65.0
Psat0s2829g0120 Pisum sativum HOM05D007737 ORTHO05D009754 1.2e-42 176.8 131 71.8
Sed0019089 Sechium edule HOM05D007737 ORTHO05D009754 1.5e-42 176.4 139 69.1
QL04p025132 Quercus lobata HOM05D007737 ORTHO05D009754 1.7e-41 172.9 137 70.8
CSS0024286 Camellia sinensis var. sinensis HOM05D007737 ORTHO05D009754 2.2e-41 172.6 136 70.6
CiPaw.13G019700 Carya illinoinensis HOM05D007737 ORTHO05D009754 3.8e-41 171.8 138 69.6
Psat0s4349g0040 Pisum sativum HOM05D007737 ORTHO05D009754 3.8e-41 171.8 131 71.0
arahy.Tifrunner.gnm1.ann1.4BAK6K Arachis hypogaea HOM05D004879 ORTHO05D009754 4.9e-41 171.4 102 77.5
Dinv43570 Davidia involucrata HOM05D007737 ORTHO05D009754 6.4e-41 171.0 134 68.7
MD02G1228500 Malus domestica HOM05D007737 ORTHO05D009754 1.4e-40 169.9 140 67.9
Psat0s4932g0040 Pisum sativum HOM05D007737 ORTHO05D009754 2.4e-40 169.1 131 72.5
RcHm_v2.0_Chr0c20g0500251 Rosa chinensis HOM05D007737 ORTHO05D009754 1.6e-39 166.4 137 57.7
Oeu029042.1 Olea europaea HOM05D007737 ORTHO05D009754 2.1e-39 166.0 139 55.4
Manes.12G126400 Manihot esculenta HOM05D007737 ORTHO05D009754 1.0e-38 163.7 131 61.1
CsaV3_6G006540 Cucumis sativus L. HOM05D007737 ORTHO05D009754 3.0e-38 162.2 124 71.0
Thecc.10G000900 Theobroma cacao HOM05D007737 ORTHO05D009754 6.6e-38 161.0 132 68.9
Gorai.012G081800 Gossypium raimondii HOM05D007737 ORTHO05D009754 1.1e-37 160.2 134 59.0
Duzib128G0131 Durio zibethinus HOM05D007737 ORTHO05D009754 4.3e-37 158.3 135 65.2
Gohir.A05G333700 Gossypium hirsutum HOM05D007737 ORTHO05D009754 4.3e-37 158.3 134 57.5
Gohir.D04G072800 Gossypium hirsutum HOM05D007737 ORTHO05D009754 4.3e-37 158.3 134 58.2
ECA236G0282 Erigeron canadensis HOM05D007737 ORTHO05D009754 1.3e-36 156.8 127 66.9
Hma1.2p1_0601F.1_g187210 Hydrangea macrophylla HOM05D007737 ORTHO05D009754 1.6e-36 156.4 138 56.5
Eucgr.D01138 Eucalyptus grandis HOM05D007737 ORTHO05D009754 6.2e-36 154.5 127 69.3
Cc02_g25850 Coffea canephora HOM05D007737 ORTHO05D009754 2.4e-35 152.5 137 61.3
FvH4_7g08430 Fragaria vesca HOM05D007737 ORTHO05D009754 5.3e-35 151.4 127 65.4
CANSAT35G0994 Cannabis sativa HOM05D007737 ORTHO05D009754 9.0e-35 150.6 139 53.2
PGSC0003DMG400015652 Solanum tuberosum HOM05D007737 ORTHO05D009754 9.0e-35 150.6 120 59.2
PGR119G2515 Punica granatum HOM05D007737 ORTHO05D009754 1.5e-34 149.8 119 63.9
GSVIVG01018401001 Vitis vinifera HOM05D007737 ORTHO05D009754 2.0e-34 149.4 139 64.7
MSTRG.4970 Avicennia marina HOM05D007737 ORTHO05D009754 3.4e-34 148.7 132 53.0
Solyc06g051160.4 Solanum lycopersicum HOM05D007737 ORTHO05D009754 5.8e-34 147.9 105 61.9
FAN03G2224 Fragaria x ananassa HOM05D007737 ORTHO05D009754 7.6e-34 147.5 127 64.6
Lsat_1_v5_gn_7_11721 Lactuca sativa HOM05D007737 ORTHO05D009754 1.7e-33 146.4 138 52.9
Medtr5g088570 Medicago truncatula HOM05D004879 ORTHO05D008271 1.7e-33 146.4 88 76.1
Actinidia30967 Actinidia chinensis HOM05D007737 ORTHO05D009754 2.2e-33 146.0 131 53.4
TAR375G1083 Trochodendron aralioides HOM05D007737 ORTHO05D009754 1.1e-32 143.7 138 50.7
Sabra14G0139900 Salix brachista HOM05D007737 ORTHO05D009754 1.4e-32 143.3 95 67.4
CAN.G1183.16 Capsicum annuum HOM05D007737 ORTHO05D009754 3.2e-32 142.1 129 62.0
DCAR_029388 Daucus carota HOM05D007737 ORTHO05D009754 4.2e-32 141.7 139 50.4
Migut.N01704 Erythranthe guttata HOM05D007737 ORTHO05D009754 7.1e-32 141.0 105 59.0
HanXRQChr06g0168511 Helianthus annuus HOM05D007737 ORTHO05D009754 9.3e-32 140.6 104 60.6
Ciclev10022762m.g Citrus clementina HOM05D007737 ORTHO05D009754 1.2e-31 140.2 139 56.1
Sc02g0003320 Simmondsia chinensis HOM05D007737 ORTHO05D009754 2.1e-31 139.4 112 68.8
Actinidia05801 Actinidia chinensis HOM05D007737 ORTHO05D009754 2.7e-31 139.0 120 55.0
FAN10G0020 Fragaria x ananassa HOM05D007737 ORTHO05D009754 1.3e-30 136.7 112 67.0
COL.COLO4_19346 Corchorus olitorius HOM05D007737 ORTHO05D009754 3.0e-30 135.6 137 51.8
Nitab4.5_0011440g0030 Nicotiana tabacum HOM05D007737 ORTHO05D009754 3.9e-30 135.2 124 50.8
Atru.chr5.19 Acer truncatum HOM05D007737 ORTHO05D009754 1.3e-28 130.2 96 74.0
SalBow4G2387 Salvia bowleyana HOM05D007737 ORTHO05D009754 4.0e-27 125.2 163 41.7
Potri.014G179800 Populus trichocarpa HOM05D007737 ORTHO05D009754 1.2e-26 123.6 102 65.7
AUR62023349 Chenopodium quinoa HOM05D007737 ORTHO05D009754 4.5e-26 121.7 99 69.7
SGA_v2.0_scaffold77G25232 Striga asiatica HOM05D007737 ORTHO05D009754 5.8e-26 121.3 185 42.2
TWI23G0770 Tripterygium wilfordii HOM05D007737 ORTHO05D009754 2.9e-25 119.0 117 48.7
TWI14G0846 Tripterygium wilfordii HOM05D007737 ORTHO05D009754 3.8e-25 118.6 130 47.7
Sopen06g017020 Solanum pennellii HOM05D007737 ORTHO05D009754 4.9e-25 118.2 80 67.5
PSO210G3843 Papaver somniferum HOM05D007737 ORTHO05D009754 6.4e-25 117.9 133 54.1
AUR62013808 Chenopodium quinoa HOM05D007737 ORTHO05D009754 4.2e-24 115.2 108 63.9
Os04g0589200 Oryza sativa ssp. japonica HOM05D007737 ORTHO05D009754 7.1e-24 114.4 121 55.4
PSO210G3425 Papaver somniferum HOM05D007737 ORTHO05D009754 1.6e-23 113.2 128 57.8
Thhalv10021734m.g Eutrema salsugineum HOM05D007737 ORTHO05D009754 2.1e-23 112.8 124 54.8
AL3G30770 Arabidopsis lyrata HOM05D007737 ORTHO05D009754 3.5e-23 112.1 112 58.9
THA.LOC104806480 Tarenaya hassleriana HOM05D007737 ORTHO05D009754 6.0e-23 111.3 126 52.4
BraA01t03730Z Brassica rapa HOM05D007737 ORTHO05D009754 7.9e-23 110.9 109 56.9
Mapoly0099s0043 Marchantia polymorpha HOM05D007737 ORTHO05D009754 1.0e-22 110.5 86 72.1
Carub.0003s1738 Capsella rubella HOM05D007737 ORTHO05D009754 1.3e-22 110.2 119 55.5
AT3G17668 Arabidopsis thaliana HOM05D007737 ORTHO05D009754 1.1e-21 107.1 112 57.1
ClCG06G000750 Citrullus lanatus HOM05D007737 ORTHO05D009754 1.5e-21 106.7 69 68.1
Sp3g15800 Schrenkiella parvula HOM05D007737 ORTHO05D009754 2.5e-21 105.9 124 53.2
unitig_22.g5837 Utricularia gibba HOM05D007737 ORTHO05D009754 4.3e-21 105.1 83 72.3
Prupe.2G111200 Prunus persica HOM05D007737 ORTHO05D009754 5.6e-21 104.8 102 61.8
C01p46550 Brassica napus HOM05D007737 ORTHO05D009754 7.4e-21 104.4 109 56.0
BcaC09g48726 Brassica carinata HOM05D001802 ORTHO05D001788 1.3e-20 103.6 109 56.0
CARHR093000 Cardamine hirsuta HOM05D007737 ORTHO05D009754 2.1e-20 102.8 110 57.3
BcaB04g20827 Brassica carinata HOM05D001802 ORTHO05D001788 3.7e-20 102.1 124 54.0
Nitab4.5_0000507g0110 Nicotiana tabacum HOM05D007737 ORTHO05D009754 4.0e-19 98.6 86 52.3
HPP92_007265 Vanilla planifolia HOM05D007737 ORTHO05D009754 6.9e-19 97.8 123 50.4
FAN06G2876 Fragaria x ananassa HOM05D007737 ORTHO05D009754 1.2e-18 97.1 77 58.4
Aa31LG8G4530 Aethionema arabicum HOM05D007345 ORTHO05D009277 6.5e-17 91.3 103 42.7
Pp3c17_5190 Physcomitrium patens HOM05D007737 ORTHO05D009754 1.4e-16 90.1 131 47.3
Pp3c8_23020 Physcomitrium patens HOM05D007737 ORTHO05D009754 4.6e-15 85.1 84 60.7
AagrBONN_evm.TU.Sc2ySwM_344.418 Anthoceros agrestis HOM05D007737 ORTHO05D009754 2.3e-14 82.8 94 41.5
vmacro13551 Vaccinium macrocarpon HOM05D007737 ORTHO05D009754 4.1e-11 72.0 166 30.7
HPP92_007269 Vanilla planifolia HOM05D007737 ORTHO05D009754 5.9e-10 68.2 66 50.0
Aqoxy3G02490 Aquilegia oxysepala HOM05D007737 ORTHO05D009754 2.9e-09 65.9 130 40.0
MELO3C022466.2 Cucumis melo HOM05D007737 ORTHO05D009754 2.9e-09 65.9 139 34.5
A01p36650 Brassica napus HOM05D007737 ORTHO05D009754 5.5e-08 61.6 64 45.3


User provided reference genes

Program Settings