Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr17g0347491 Lupinus albus HOM05D005119 ORTHO05D006338 3.9e-120 434.9 228 100.0
arahy.Tifrunner.gnm1.ann1.JSP71L Arachis hypogaea HOM05D005119 ORTHO05D006338 1.1e-111 406.8 230 90.9
arahy.Tifrunner.gnm1.ann1.4E592X Arachis hypogaea HOM05D005119 ORTHO05D006338 1.5e-111 406.4 230 90.9
Ca_06151_v3 Cicer arietinum L. HOM05D005119 ORTHO05D006338 2.5e-111 405.6 234 91.5
Atru.chr3.2860 Acer truncatum HOM05D005119 ORTHO05D006338 4.3e-111 404.8 228 92.1
RcHm_v2.0_Chr5g0049761 Rosa chinensis HOM05D005119 ORTHO05D006338 4.3e-111 404.8 226 92.0
TPR.G11644 Trifolium pratense HOM05D005119 ORTHO05D006338 2.1e-110 402.5 232 91.8
Psat2g022840 Pisum sativum HOM05D005119 ORTHO05D006338 2.8e-110 402.1 232 91.4
SalBow3G0587 Salvia bowleyana HOM05D005119 ORTHO05D006338 3.6e-110 401.7 225 92.9
Prupe.6G153600 Prunus persica HOM05D005119 ORTHO05D006338 8.1e-110 400.6 228 90.8
VMungo0647G2262 Vigna mungo HOM05D005119 ORTHO05D006338 8.1e-110 400.6 229 91.7
Eucgr.B03785 Eucalyptus grandis HOM05D005119 ORTHO05D006338 1.1e-109 400.2 229 89.5
Duzib170G0448 Durio zibethinus HOM05D005119 ORTHO05D006338 3.1e-109 398.7 228 90.8
Gohir.D08G008500 Gossypium hirsutum HOM05D005119 ORTHO05D006338 5.3e-109 397.9 228 89.9
Gorai.004G001700 Gossypium raimondii HOM05D005119 ORTHO05D006338 5.3e-109 397.9 228 89.9
Phvul.008G207500 Phaseolus vulgaris HOM05D005119 ORTHO05D006338 6.9e-109 397.5 229 90.8
FAN21G1454 Fragaria x ananassa HOM05D005119 ORTHO05D006338 2.0e-108 396.0 229 89.5
LjContig00564g0012096 Lotus japonicus HOM05D005119 ORTHO05D006338 2.6e-108 395.6 232 90.1
CSS0022741 Camellia sinensis var. sinensis HOM05D005119 ORTHO05D006338 3.4e-108 395.2 230 89.1
FAN21G3401 Fragaria x ananassa HOM05D005119 ORTHO05D006338 3.4e-108 395.2 229 89.1
Glyma.02G274200 Glycine max HOM05D005119 ORTHO05D006338 5.8e-108 394.4 228 89.9
PGR102G2321 Punica granatum HOM05D005119 ORTHO05D006338 9.9e-108 393.7 229 89.1
Medtr5g087720 Medicago truncatula HOM05D005119 ORTHO05D006338 1.7e-107 392.9 223 92.4
FAN16G2078 Fragaria x ananassa HOM05D005119 ORTHO05D006338 2.9e-107 392.1 226 89.4
AT5G21070 Arabidopsis thaliana HOM05D005119 ORTHO05D006338 4.9e-107 391.3 228 89.0
Lj6g0018237 Lotus japonicus HOM05D005119 ORTHO05D006338 6.4e-107 391.0 229 88.6
Lj2A941G6 Lonicera japonica HOM05D005119 ORTHO05D006338 1.1e-106 390.2 226 89.8
Dinv25746 Davidia involucrata HOM05D005119 ORTHO05D006338 1.4e-106 389.8 228 88.2
Thecc.09G337400 Theobroma cacao HOM05D005119 ORTHO05D006338 1.4e-106 389.8 228 88.6
Glyma.14G041900 Glycine max HOM05D005119 ORTHO05D006338 1.9e-106 389.4 230 90.0
Carub.0006s1937 Capsella rubella HOM05D005119 ORTHO05D006338 2.4e-106 389.0 228 88.6
Migut.N02419 Erythranthe guttata HOM05D005119 ORTHO05D006338 5.4e-106 387.9 226 89.4
AL6G32630 Arabidopsis lyrata HOM05D005119 ORTHO05D006338 7.1e-106 387.5 228 88.2
Dinv05232 Davidia involucrata HOM05D005119 ORTHO05D006338 9.3e-106 387.1 224 88.4
Duzib168G2211 Durio zibethinus HOM05D005119 ORTHO05D006338 1.2e-105 386.7 228 88.2
SGA_v2.0_scaffold16G07568 Striga asiatica HOM05D005119 ORTHO05D006338 1.2e-105 386.7 226 89.4
Cc01_g07550 Coffea canephora HOM05D005119 ORTHO05D006338 1.6e-105 386.3 227 89.0
unitig_27.g25021 Utricularia gibba HOM05D005119 ORTHO05D006338 1.6e-105 386.3 226 88.1
PSO339G0009 Papaver somniferum HOM05D005119 ORTHO05D006338 2.1e-105 386.0 228 86.8
MD11G1180800 Malus domestica HOM05D005119 ORTHO05D006338 3.5e-105 385.2 230 87.0
CAN.G864.4 Capsicum annuum HOM05D005119 ORTHO05D006338 4.6e-105 384.8 225 89.3
Hma1.2p1_0218F.1_g092630 Hydrangea macrophylla HOM05D005119 ORTHO05D006338 4.6e-105 384.8 231 87.4
Oeu026660.1 Olea europaea HOM05D005119 ORTHO05D006338 4.6e-105 384.8 227 86.8
Potri.004G196600 Populus trichocarpa HOM05D005119 ORTHO05D006338 4.6e-105 384.8 229 87.8
CARHR191800 Cardamine hirsuta HOM05D005119 ORTHO05D006338 6.0e-105 384.4 228 88.2
Ciclev10016530m.g Citrus clementina HOM05D005119 ORTHO05D006338 6.0e-105 384.4 232 87.5
Rhsim13G0201000 Rhododendron simsii HOM05D005119 ORTHO05D006338 7.8e-105 384.0 232 85.8
Nitab4.5_0010431g0020 Nicotiana tabacum HOM05D005119 ORTHO05D006338 1.0e-104 383.6 225 88.4
CANSAT54G2327 Cannabis sativa HOM05D005119 ORTHO05D006338 1.3e-104 383.3 230 86.5
Thhalv10014597m.g Eutrema salsugineum HOM05D005119 ORTHO05D006338 1.3e-104 383.3 228 87.3
Peaxi162Scf00217g00811 Petunia axillaris HOM05D005119 ORTHO05D006338 1.3e-104 383.3 225 88.4
Actinidia07012 Actinidia chinensis HOM05D005119 ORTHO05D006338 1.7e-104 382.9 222 90.1
A10p19000 Brassica napus HOM05D005119 ORTHO05D006338 1.7e-104 382.9 228 87.7
BraA10t43978Z Brassica rapa HOM05D005119 ORTHO05D006338 1.7e-104 382.9 228 87.7
MELO3C015629.2 Cucumis melo HOM05D005119 ORTHO05D006338 1.7e-104 382.9 231 85.7
C09p55010 Brassica napus HOM05D005119 ORTHO05D006338 2.3e-104 382.5 228 87.3
Sed0002058 Sechium edule HOM05D005119 ORTHO05D006338 2.3e-104 382.5 231 85.3
Sopen11g029200 Solanum pennellii HOM05D005119 ORTHO05D006338 2.3e-104 382.5 225 88.4
PGSC0003DMG400018703 Solanum tuberosum HOM05D005119 ORTHO05D006338 2.3e-104 382.5 225 88.4
Aa31LG1G13700 Aethionema arabicum HOM05D005119 ORTHO05D006338 3.0e-104 382.1 228 87.7
Gorai.009G105100 Gossypium raimondii HOM05D005119 ORTHO05D006338 6.6e-104 380.9 228 87.3
Manes.04G053600 Manihot esculenta HOM05D005119 ORTHO05D006338 6.6e-104 380.9 227 87.2
PSO384G4010 Papaver somniferum HOM05D005119 ORTHO05D006338 6.6e-104 380.9 228 86.0
Potri.009G158800 Populus trichocarpa HOM05D005119 ORTHO05D006338 6.6e-104 380.9 233 86.3
BcaB08g36485 Brassica carinata HOM05D005119 ORTHO05D006338 8.7e-104 380.6 228 86.8
GSVIVG01037452001 Vitis vinifera HOM05D005119 ORTHO05D006338 8.7e-104 380.6 229 87.3
Gohir.D05G101000 Gossypium hirsutum HOM05D005119 ORTHO05D006338 1.1e-103 380.2 228 86.8
Sp6g23450 Schrenkiella parvula HOM05D005119 ORTHO05D006338 1.1e-103 380.2 228 86.8
BolC9t58364H Brassica oleracea HOM05D005119 ORTHO05D006338 1.5e-103 379.8 228 86.8
ECA240G4195 Erigeron canadensis HOM05D005119 ORTHO05D006338 1.5e-103 379.8 230 85.7
vmacro04109 Vaccinium macrocarpon HOM05D005119 ORTHO05D006338 1.9e-103 379.4 235 84.3
FAN25G0803 Fragaria x ananassa HOM05D005119 ORTHO05D006338 3.3e-103 378.6 256 79.3
TAR636G0794 Trochodendron aralioides HOM05D005119 ORTHO05D006338 3.3e-103 378.6 224 87.1
HanXRQChr13g0420891 Helianthus annuus HOM05D005119 ORTHO05D006338 4.3e-103 378.3 222 87.8
QL01p020410 Quercus lobata HOM05D005119 ORTHO05D006338 5.6e-103 377.9 233 86.3
COL.COLO4_18366 Corchorus olitorius HOM05D005396 ORTHO05D006338 7.3e-103 377.5 212 91.5
Gohir.A05G101200 Gossypium hirsutum HOM05D005119 ORTHO05D006338 7.3e-103 377.5 228 86.4
Manes.11G112200 Manihot esculenta HOM05D005119 ORTHO05D006338 2.1e-102 375.9 228 86.8
THA.LOC104810964 Tarenaya hassleriana HOM05D005119 ORTHO05D006338 2.1e-102 375.9 229 86.9
BcaB05g22789 Brassica carinata HOM05D005119 ORTHO05D006338 2.8e-102 375.6 232 85.3
PGSC0003DMG400008707 Solanum tuberosum HOM05D005119 ORTHO05D006338 2.8e-102 375.6 225 88.0
BcaC03g13824 Brassica carinata HOM05D005119 ORTHO05D006338 3.6e-102 375.2 228 86.0
BNapus_Darmor_BZH_scaffold_38p01200 Brassica napus HOM05D005119 ORTHO05D006338 4.8e-102 374.8 228 86.0
C02p10590 Brassica napus HOM05D005119 ORTHO05D006338 4.8e-102 374.8 228 86.0
BraA02t05611Z Brassica rapa HOM05D005119 ORTHO05D006338 4.8e-102 374.8 228 86.0
ClCG03G014150 Citrullus lanatus HOM05D005119 ORTHO05D006338 4.8e-102 374.8 231 84.8
Sopen01g004620 Solanum pennellii HOM05D005119 ORTHO05D006338 4.8e-102 374.8 227 86.8
THA.LOC104799587 Tarenaya hassleriana HOM05D005119 ORTHO05D006338 4.8e-102 374.8 228 84.6
Sed0001894 Sechium edule HOM05D005119 ORTHO05D006338 8.1e-102 374.0 231 84.4
MSTRG.12410 Avicennia marina HOM05D005119 ORTHO05D006338 1.1e-101 373.6 226 86.7
BolC2t07092H Brassica oleracea HOM05D005119 ORTHO05D006338 1.1e-101 373.6 228 85.5
MSTRG.17662 Avicennia marina HOM05D005119 ORTHO05D006338 1.4e-101 373.2 226 86.7
MBI13_g02397_MAGBIO Magnolia biondii HOM05D005119 ORTHO05D006338 2.4e-101 372.5 228 85.5
EL10Ac7g16218 Beta vulgaris HOM05D005119 ORTHO05D006338 3.1e-101 372.1 232 85.3
Aqoxy2G00066 Aquilegia oxysepala HOM05D005119 ORTHO05D006338 5.3e-101 371.3 231 83.5
TWI75G0877 Tripterygium wilfordii HOM05D005119 ORTHO05D006338 5.3e-101 371.3 231 84.8
Nitab4.5_0001183g0030 Nicotiana tabacum HOM05D005119 ORTHO05D006338 6.9e-101 370.9 214 89.7
Hund18832 Selenicereus undatus HOM05D005119 ORTHO05D006338 6.9e-101 370.9 208 93.3
CsaV3_1G042110 Cucumis sativus L. HOM05D005119 ORTHO05D006338 9.0e-101 370.5 231 84.0
DCAR_002131 Daucus carota HOM05D005119 ORTHO05D006338 9.0e-101 370.5 226 85.8
Os01g0277700 Oryza sativa ssp. japonica HOM05D005119 ORTHO05D006338 2.0e-100 369.4 225 83.6
TWI79G0087 Tripterygium wilfordii HOM05D005119 ORTHO05D006338 2.6e-100 369.0 228 84.6
Sc21g0006500 Simmondsia chinensis HOM05D005119 ORTHO05D006338 3.4e-100 368.6 232 84.5
Sabra04G0133300 Salix brachista HOM05D005119 ORTHO05D006338 4.5e-100 368.2 229 83.8
MBI19_g28105_MAGBIO Magnolia biondii HOM05D005119 ORTHO05D006338 5.8e-100 367.9 225 84.0
AUR62001614 Chenopodium quinoa HOM05D005119 ORTHO05D006338 2.2e-99 365.9 229 84.3
Lsat_1_v5_gn_3_116100 Lactuca sativa HOM05D005119 ORTHO05D006338 4.9e-99 364.8 204 90.2
ATR0307G125 Amborella trichopoda HOM05D005119 ORTHO05D006338 4.2e-98 361.7 226 83.2
Zm00001eb128960 Zea mays HOM05D005119 ORTHO05D006338 1.2e-97 360.1 223 82.1
SEGI_02516 Sequoiadendron giganteum HOM05D005119 ORTHO05D006338 3.5e-97 358.6 228 80.7
HPP92_006662 Vanilla planifolia HOM05D005119 ORTHO05D006338 5.6e-95 351.3 228 80.3
Oeu022226.2 Olea europaea HOM05D005119 ORTHO05D006338 7.4e-95 350.9 300 66.3
Sabra09G0124300 Salix brachista HOM05D005119 ORTHO05D006338 2.5e-90 335.9 233 78.1
Ah.08g222830 Amaranthus hybridus HOM05D005119 ORTHO05D006338 1.8e-88 329.7 192 88.5
SMO347G0469 Selaginella moellendorffii HOM05D005119 ORTHO05D006338 3.3e-87 325.5 207 79.7
CDE07G1923 Ceratophyllum demersum HOM05D005119 ORTHO05D006338 3.7e-86 322.0 214 76.6
Mapoly0024s0118 Marchantia polymorpha HOM05D005119 ORTHO05D006338 1.7e-83 313.2 211 76.8
Solyc11g071510.3 Solanum lycopersicum HOM05D005119 ORTHO05D006338 1.5e-79 300.1 191 84.3
Lj2C929T5 Lonicera japonica HOM05D005119 ORTHO05D006338 2.5e-79 299.3 179 87.7
Pp3c19_11640 Physcomitrium patens HOM05D005119 ORTHO05D006338 5.3e-77 291.6 213 73.2
Haze_23668 Corylus avellana HOM05D005119 ORTHO05D006338 6.9e-77 291.2 194 82.5
CiPaw.14G091700 Carya illinoinensis HOM05D005119 ORTHO05D006338 1.0e-75 287.3 158 95.6
FvH4_3g27140 Fragaria vesca HOM05D005119 ORTHO05D006338 1.3e-75 287.0 158 93.0
Gohir.A08G000076 Gossypium hirsutum HOM05D005119 ORTHO05D006338 1.1e-74 283.9 161 91.3
TAR369G0017 Trochodendron aralioides HOM05D005119 ORTHO05D006338 1.9e-74 283.1 158 92.4
Nn7g37297 Nelumbo nucifera HOM05D005119 ORTHO05D006338 8.8e-72 274.2 176 80.7
SGA_v2.0_scaffold79G25507 Striga asiatica HOM05D005119 ORTHO05D006338 8.8e-72 274.2 157 90.4
AagrBONN_evm.TU.Sc2ySwM_228.3807 Anthoceros agrestis HOM05D000001 ORTHO05D000003 3.3e-71 272.3 186 78.0
DCAR_031602 Daucus carota HOM05D005119 ORTHO05D006338 1.7e-70 270.0 165 85.5
Cpa.g.sc103.65 Carica papaya HOM05D005119 ORTHO05D006338 4.8e-70 268.5 161 86.3
CDE08G0206 Ceratophyllum demersum HOM05D005119 ORTHO05D006338 5.3e-69 265.0 181 75.7
CDE04G1732 Ceratophyllum demersum HOM05D005119 ORTHO05D001779 2.8e-62 242.7 160 80.0
AUR62020163 Chenopodium quinoa HOM05D005119 ORTHO05D006338 9.7e-55 217.6 124 91.1
EL10Ac8g19914 Beta vulgaris HOM05D005119 ORTHO05D006338 4.1e-53 212.2 161 73.3
Gorai.006G031100 Gossypium raimondii HOM05D005119 ORTHO05D006338 2.0e-44 183.3 110 88.2
Solyc01g009145.1 Solanum lycopersicum HOM05D005119 ORTHO05D006338 1.5e-42 177.2 103 90.3
EL10Ac6g14714 Beta vulgaris HOM05D005119 ORTHO05D006338 5.2e-40 168.7 100 90.0
Gohir.D11G235450 Gossypium hirsutum HOM05D005119 ORTHO05D006338 1.7e-35 153.7 158 55.7
Gorai.004G093900 Gossypium raimondii HOM05D005119 ORTHO05D006338 4.2e-34 149.1 88 89.8
AagrBONN_evm.TU.Sc2ySwM_368.775 Anthoceros agrestis HOM05D005119 ORTHO05D006338 1.1e-29 134.4 79 83.5
PRCOL_00002764 Prasinoderma coloniale HOM05D005119 ORTHO05D006338 3.6e-25 119.4 206 37.9
arahy.Tifrunner.gnm1.ann1.PKBV9I Arachis hypogaea HOM05D005119 ORTHO05D006338 8.0e-25 118.2 81 80.2
Actinidia37188 Actinidia chinensis HOM05D005119 ORTHO05D006338 1.7e-22 110.5 57 93.0
RcHm_v2.0_Chr5g0049771 Rosa chinensis HOM05D005119 ORTHO05D006338 6.0e-20 102.1 63 81.0
Oeu048804.2 Olea europaea HOM05D001997 ORTHO05D004620 2.1e-17 93.6 66 72.7
SHI25369 Sapria himalayana HOM05D005119 ORTHO05D006338 2.0e-15 87.0 65 66.2
Dinv01011 Davidia involucrata HOM05D005119 ORTHO05D006338 8.6e-11 71.6 50 72.0


User provided reference genes

Program Settings