Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr17g0347461 Lupinus albus HOM05D007267 ORTHO05D009053 5.3e-96 354.4 180 100.0
arahy.Tifrunner.gnm1.ann1.YII7CZ Arachis hypogaea HOM05D007267 ORTHO05D009053 4.1e-48 195.3 134 76.1
arahy.Tifrunner.gnm1.ann1.NLVX9W Arachis hypogaea HOM05D007267 ORTHO05D009053 1.7e-46 189.9 134 75.4
Lj6g0001809 Lotus japonicus HOM05D007267 ORTHO05D009053 2.2e-41 172.9 133 72.9
Medtr3g079820 Medicago truncatula HOM05D007267 ORTHO05D009053 2.7e-39 166.0 109 77.1
Ca_16267_v3 Cicer arietinum L. HOM05D003229 ORTHO05D009053 1.1e-37 160.6 103 77.7
Glyma.02G102300 Glycine max HOM05D007267 ORTHO05D009053 1.5e-37 160.2 133 67.7
TPR.G15594 Trifolium pratense HOM05D007267 ORTHO05D009053 3.2e-37 159.1 131 68.7
FAN16G2508 Fragaria x ananassa HOM05D007267 ORTHO05D009053 5.5e-37 158.3 132 63.6
FAN21G3895 Fragaria x ananassa HOM05D007267 ORTHO05D009053 9.4e-37 157.5 128 64.8
Glyma.07G213600 Glycine max HOM05D007267 ORTHO05D009053 1.2e-36 157.1 131 67.9
FAN25G2009 Fragaria x ananassa HOM05D007267 ORTHO05D009053 2.7e-36 156.0 134 61.9
arahy.Tifrunner.gnm1.ann1.SB69IV Arachis hypogaea HOM05D007267 ORTHO05D009053 6.1e-36 154.8 157 57.3
Dinv32141 Davidia involucrata HOM05D007267 ORTHO05D009053 6.1e-36 154.8 112 70.5
FvH4_3g26950 Fragaria vesca HOM05D007267 ORTHO05D009053 6.1e-36 154.8 130 65.4
Psat5g107600 Pisum sativum HOM05D007267 ORTHO05D009053 6.1e-36 154.8 127 66.9
Phvul.006G014400 Phaseolus vulgaris HOM05D007267 ORTHO05D009053 1.0e-35 154.1 131 65.6
MD03G1161500 Malus domestica HOM05D007267 ORTHO05D009053 3.0e-35 152.5 126 62.7
Prupe.6G149700 Prunus persica HOM05D007267 ORTHO05D009053 5.2e-35 151.8 130 64.6
QL03p058144 Quercus lobata HOM05D007267 ORTHO05D009053 2.0e-34 149.8 130 64.6
VMungo0540G2312 Vigna mungo HOM05D007267 ORTHO05D009053 2.2e-33 146.4 131 64.1
RcHm_v2.0_Chr5g0049391 Rosa chinensis HOM05D007267 ORTHO05D009053 2.8e-33 146.0 127 63.0
Nn2g14465 Nelumbo nucifera HOM05D007267 ORTHO05D009053 6.3e-33 144.8 128 60.2
CSS0044664 Camellia sinensis var. sinensis HOM05D004779 ORTHO05D005737 1.1e-32 144.1 110 70.9
Haze_02482 Corylus avellana HOM05D007267 ORTHO05D009053 1.4e-32 143.7 128 64.1
Potri.009G155300 Populus trichocarpa HOM05D007267 ORTHO05D009053 1.4e-32 143.7 130 60.0
TAR623G0997 Trochodendron aralioides HOM05D007267 ORTHO05D009053 1.8e-32 143.3 129 60.5
Ciclev10029598m.g Citrus clementina HOM05D007267 ORTHO05D009053 2.4e-32 142.9 126 61.9
Cc05_g03630 Coffea canephora HOM05D007267 ORTHO05D009053 3.1e-32 142.5 81 86.4
Manes.11G104200 Manihot esculenta HOM05D007267 ORTHO05D009053 4.1e-32 142.1 131 61.1
CANSAT54G0135 Cannabis sativa HOM05D007267 ORTHO05D009053 5.4e-32 141.7 127 59.1
Duzib170G0076 Durio zibethinus HOM05D007267 ORTHO05D009053 7.0e-32 141.4 128 61.7
Actinidia22464 Actinidia chinensis HOM05D007267 ORTHO05D009053 9.1e-32 141.0 91 75.8
CiPaw.13G125300 Carya illinoinensis HOM05D007267 ORTHO05D009053 9.1e-32 141.0 128 60.2
FAN11G1992 Fragaria x ananassa HOM05D007267 ORTHO05D009053 1.6e-31 140.2 130 62.3
vmacro14300 Vaccinium macrocarpon HOM05D007267 ORTHO05D009053 1.6e-31 140.2 97 73.2
ClCG02G024060 Citrullus lanatus HOM05D007267 ORTHO05D009053 2.0e-31 139.8 92 70.7
Sabra09G0121800 Salix brachista HOM05D004779 ORTHO05D005737 2.7e-31 139.4 135 61.5
Thecc.09G267200 Theobroma cacao HOM05D007267 ORTHO05D009053 4.5e-31 138.7 109 66.1
Migut.N02428 Erythranthe guttata HOM05D007267 ORTHO05D009053 7.7e-31 137.9 107 66.4
Nitab4.5_0001504g0080 Nicotiana tabacum HOM05D007267 ORTHO05D009053 7.7e-31 137.9 126 62.7
Eucgr.J00600 Eucalyptus grandis HOM05D007267 ORTHO05D009053 1.0e-30 137.5 129 61.2
MSTRG.12404 Avicennia marina HOM05D007267 ORTHO05D009053 1.3e-30 137.1 126 59.5
Hma1.2p1_0218F.1_g092330 Hydrangea macrophylla HOM05D007267 ORTHO05D009053 1.3e-30 137.1 75 89.3
Cfa019700 Carpinus fangiana HOM05D007267 ORTHO05D009053 2.9e-30 136.0 130 60.8
Cfa019701 Carpinus fangiana HOM05D007267 ORTHO05D009053 2.9e-30 136.0 130 60.8
COL.COLO4_25353 Corchorus olitorius HOM05D007267 ORTHO05D009053 2.9e-30 136.0 126 58.7
PGR119G2323 Punica granatum HOM05D007267 ORTHO05D009053 5.0e-30 135.2 139 56.8
TWI31G1096 Tripterygium wilfordii HOM05D007267 ORTHO05D009053 5.0e-30 135.2 70 88.6
Aa31LG1G13830 Aethionema arabicum HOM05D007267 ORTHO05D009053 1.1e-29 134.0 73 82.2
Gohir.D11G012400 Gossypium hirsutum HOM05D007267 ORTHO05D009053 1.1e-29 134.0 125 61.6
Gorai.007G016000 Gossypium raimondii HOM05D007267 ORTHO05D009053 1.1e-29 134.0 125 61.6
Peaxi162Scf00345g00617 Petunia axillaris HOM05D007267 ORTHO05D009053 1.1e-29 134.0 126 61.1
Atru.chr3.3040 Acer truncatum HOM05D007267 ORTHO05D009053 1.9e-29 133.3 86 75.6
MELO3C014688.2 Cucumis melo HOM05D007267 ORTHO05D009053 1.9e-29 133.3 134 55.2
HanXRQChr09g0268081 Helianthus annuus HOM05D007267 ORTHO05D009053 3.2e-29 132.5 87 74.7
BcaNung05756 Brassica carinata HOM05D007267 ORTHO05D009053 4.2e-29 132.1 73 82.2
A03p10350 Brassica napus HOM05D007267 ORTHO05D009053 4.2e-29 132.1 73 82.2
C02p10530 Brassica napus HOM05D007267 ORTHO05D009053 4.2e-29 132.1 128 53.9
C03p11890 Brassica napus HOM05D007267 ORTHO05D009053 4.2e-29 132.1 73 82.2
BolC3t13659H Brassica oleracea HOM05D007267 ORTHO05D009053 4.2e-29 132.1 73 82.2
BraA02t05605Z Brassica rapa HOM05D007267 ORTHO05D009053 4.2e-29 132.1 128 53.9
CsaV3_4G023270 Cucumis sativus L. HOM05D007267 ORTHO05D009053 4.2e-29 132.1 74 81.1
EL10Ac7g16252 Beta vulgaris HOM05D007267 ORTHO05D009053 5.5e-29 131.7 88 72.7
Lsat_1_v5_gn_4_124761 Lactuca sativa HOM05D007267 ORTHO05D009053 5.5e-29 131.7 157 50.3
AL6G32500 Arabidopsis lyrata HOM05D007267 ORTHO05D009053 7.2e-29 131.3 71 84.5
AT5G20935 Arabidopsis thaliana HOM05D007267 ORTHO05D009053 7.2e-29 131.3 71 84.5
BcaC03g13815 Brassica carinata HOM05D007267 ORTHO05D009053 7.2e-29 131.3 128 53.9
BolC2t07084H Brassica oleracea HOM05D007267 ORTHO05D009053 7.2e-29 131.3 128 53.9
BraA03t10347Z Brassica rapa HOM05D007267 ORTHO05D009053 7.2e-29 131.3 73 82.2
Carub.0006s1925 Capsella rubella HOM05D007267 ORTHO05D009053 7.2e-29 131.3 71 84.5
Sopen01g004730 Solanum pennellii HOM05D007267 ORTHO05D009053 7.2e-29 131.3 73 86.3
Aqoxy2G00618 Aquilegia oxysepala HOM05D007267 ORTHO05D009053 9.5e-29 131.0 126 59.5
BcaB05g22800 Brassica carinata HOM05D007267 ORTHO05D009053 9.5e-29 131.0 128 53.9
CARHR191910 Cardamine hirsuta HOM05D007267 ORTHO05D009053 9.5e-29 131.0 73 80.8
Solyc01g009245.1 Solanum lycopersicum HOM05D007267 ORTHO05D009053 9.5e-29 131.0 73 86.3
Thhalv10015046m.g Eutrema salsugineum HOM05D007267 ORTHO05D009053 1.6e-28 130.2 71 83.1
Cpa.g.sc103.55 Carica papaya HOM05D007267 ORTHO05D009053 2.1e-28 129.8 72 83.3
CAN.G226.32 Capsicum annuum HOM05D007267 ORTHO05D009053 2.8e-28 129.4 129 59.7
GSVIVG01037512001 Vitis vinifera HOM05D007267 ORTHO05D009053 2.8e-28 129.4 74 83.8
PGSC0003DMG400013132 Solanum tuberosum HOM05D007267 ORTHO05D009053 3.6e-28 129.0 129 58.9
PSO384G0574 Papaver somniferum HOM05D007267 ORTHO05D009053 8.0e-28 127.9 126 54.8
Ah.15g099120 Amaranthus hybridus HOM05D007267 ORTHO05D009053 1.0e-27 127.5 88 70.5
SalBow3G2700 Salvia bowleyana HOM05D007267 ORTHO05D009053 1.0e-27 127.5 131 55.7
PSO339G2642 Papaver somniferum HOM05D007267 ORTHO05D009053 1.8e-27 126.7 126 54.8
THA.LOC104799596 Tarenaya hassleriana HOM05D007267 ORTHO05D009053 3.0e-27 125.9 84 69.0
Sed0001981 Sechium edule HOM05D007267 ORTHO05D009053 4.0e-27 125.6 97 62.9
Rhsim01G0198000 Rhododendron simsii HOM05D007267 ORTHO05D009053 5.2e-27 125.2 157 52.9
unitig_8.g2981 Utricularia gibba HOM05D007267 ORTHO05D009053 5.2e-27 125.2 70 82.9
Duzib168G2107 Durio zibethinus HOM05D004779 ORTHO05D005737 3.4e-26 122.5 83 72.3
Duzib168G1484 Durio zibethinus HOM05D007267 ORTHO05D009053 4.4e-26 122.1 122 55.7
Gohir.A11G015400 Gossypium hirsutum HOM05D007267 ORTHO05D009053 5.7e-26 121.7 117 61.5
arahy.Tifrunner.gnm1.ann1.69KWVE Arachis hypogaea HOM05D007267 ORTHO05D009053 1.3e-25 120.6 100 67.0
arahy.Tifrunner.gnm1.ann1.BBFR3C Arachis hypogaea HOM05D003566 ORTHO05D009053 1.1e-24 117.5 99 66.7
Zm00001eb015220 Zea mays HOM05D007267 ORTHO05D009053 1.4e-24 117.1 70 74.3
ATR0697G260 Amborella trichopoda HOM05D007267 ORTHO05D009053 7.0e-24 114.8 80 66.2
Medtr3g079783 Medicago truncatula HOM05D000005 ORTHO05D000294 1.6e-23 113.6 109 60.6
Sed0001742 Sechium edule HOM05D007267 ORTHO05D009053 1.0e-22 110.9 100 59.0
SEGI_22571 Sequoiadendron giganteum HOM05D007267 ORTHO05D009053 1.7e-22 110.2 76 64.5
Aqoxy51s004 Aquilegia oxysepala HOM05D007267 ORTHO05D009053 5.6e-21 105.1 56 83.9
CDE07G1374 Ceratophyllum demersum HOM05D004582 ORTHO05D005507 5.6e-21 105.1 119 50.4
AagrBONN_evm.TU.Sc2ySwM_117.833 Anthoceros agrestis HOM05D007267 ORTHO05D009053 3.6e-20 102.4 71 57.7
ECA232G2859 Erigeron canadensis HOM05D000436 ORTHO05D008174 8.0e-20 101.3 111 52.3
Mapoly0146s0012 Marchantia polymorpha HOM05D007267 ORTHO05D009053 1.0e-19 100.9 91 56.0
SMO367G0148 Selaginella moellendorffii HOM05D007267 ORTHO05D009053 6.8e-19 98.2 64 64.1
Pp3c3_19300 Physcomitrium patens HOM05D007267 ORTHO05D009053 3.4e-18 95.9 128 39.8
CBR_g51378 Chara braunii HOM05D007267 ORTHO05D009053 7.5e-18 94.7 71 52.1
MBI11_g25049_MAGBIO Magnolia biondii HOM05D007267 ORTHO05D009053 5.8e-10 68.6 36 80.6
Nitab4.5_0000157g0140 Nicotiana tabacum HOM05D007267 ORTHO05D009053 1.7e-09 67.0 34 88.2
arahy.Tifrunner.gnm1.ann1.RKVJ8T Arachis hypogaea HOM05D007267 ORTHO05D009053 2.4e-08 63.2 35 82.9
Os07g0164200 Oryza sativa ssp. japonica HOM05D007267 ORTHO05D009053 2.0e-07 60.1 40 70.0
Lsat_1_v5_gn_5_53160 Lactuca sativa HOM05D007267 ORTHO05D009053 1.7e-06 57.0 38 68.4
Lsat_1_v5_gn_6_53880 Lactuca sativa HOM05D007267 ORTHO05D009053 5.0e-06 55.5 39 66.7
Gorai.006G118000 Gossypium raimondii HOM05D007267 ORTHO05D009053 6.6e-06 55.1 42 61.9


User provided reference genes

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