Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr17g0346041 Lupinus albus HOM05D008015 ORTHO05D009180 1.9e-95 352.4 174 100.0
Lalb_Chr18g0053531 Lupinus albus HOM05D008015 ORTHO05D009180 2.2e-30 136.3 163 52.8
LjContig00141g0001505 Lotus japonicus HOM05D008015 ORTHO05D009180 5.9e-28 128.3 165 49.1
Lalb_Chr15g0084981 Lupinus albus HOM05D008015 ORTHO05D009180 1.2e-23 114.0 152 52.0
VMungo0647G1978 Vigna mungo HOM05D008015 ORTHO05D009180 3.4e-23 112.5 163 44.8
Glyma.18G041300 Glycine max HOM05D008015 ORTHO05D009180 2.8e-22 109.4 139 52.5
Medtr5g077940 Medicago truncatula HOM05D008015 ORTHO05D009180 1.4e-21 107.1 149 47.7
Glyma.14G213100 Glycine max HOM05D008015 ORTHO05D009180 1.8e-21 106.7 171 43.9
QL02p059324 Quercus lobata HOM05D008015 ORTHO05D009180 2.4e-21 106.3 161 47.2
TAR371G1005 Trochodendron aralioides HOM05D008015 ORTHO05D009180 3.1e-21 105.9 159 45.3
Potri.004G085100 Populus trichocarpa HOM05D008015 ORTHO05D009180 2.7e-20 102.8 177 42.9
Ciclev10012847m.g Citrus clementina HOM05D008015 ORTHO05D009180 2.3e-19 99.8 148 44.6
TPR.G30001 Trifolium pratense HOM05D008015 ORTHO05D009180 5.0e-19 98.6 152 42.8
VMungo1383G2632 Vigna mungo HOM05D008015 ORTHO05D009180 8.6e-19 97.8 137 47.4
Phvul.001G229400 Phaseolus vulgaris HOM05D008015 ORTHO05D009180 1.1e-18 97.4 135 48.9
Potri.017G131300 Populus trichocarpa HOM05D008015 ORTHO05D009180 5.6e-18 95.1 171 40.9
Oeu032314.1 Olea europaea HOM05D008015 ORTHO05D009180 3.6e-17 92.4 161 37.9
Cc07_g13270 Coffea canephora HOM05D008015 ORTHO05D009180 4.7e-17 92.0 174 39.7
Medtr3g065210 Medicago truncatula HOM05D008015 ORTHO05D009180 2.3e-16 89.7 159 39.0
Cfa007792 Carpinus fangiana HOM05D008015 ORTHO05D009180 6.8e-16 88.2 164 43.3
CiPaw.03G073500 Carya illinoinensis HOM05D008015 ORTHO05D009180 6.8e-16 88.2 109 46.8
Duzib268G1603 Durio zibethinus HOM05D008015 ORTHO05D009180 6.8e-16 88.2 152 41.4
Phvul.008G237600 Phaseolus vulgaris HOM05D008015 ORTHO05D009180 6.8e-16 88.2 133 44.4
Sabra17G0109400 Salix brachista HOM05D008015 ORTHO05D009180 6.8e-16 88.2 112 52.7
Nn4g24386 Nelumbo nucifera HOM05D008015 ORTHO05D009180 1.5e-15 87.0 164 41.5
Actinidia28799 Actinidia chinensis HOM05D008015 ORTHO05D009180 4.4e-15 85.5 146 38.4
MBI13_g45895_MAGBIO Magnolia biondii HOM05D008015 ORTHO05D009180 5.8e-15 85.1 150 41.3
Actinidia35723 Actinidia chinensis HOM05D008015 ORTHO05D009180 1.7e-14 83.6 146 39.7
FAN23G1273 Fragaria x ananassa HOM05D008015 ORTHO05D009180 2.2e-14 83.2 105 46.7
RcHm_v2.0_Chr3g0491241 Rosa chinensis HOM05D008015 ORTHO05D009180 2.2e-14 83.2 118 46.6
Prupe.3G166400 Prunus persica HOM05D008015 ORTHO05D009180 2.9e-14 82.8 133 46.6
TAR629G2519 Trochodendron aralioides HOM05D008015 ORTHO05D009180 2.9e-14 82.8 156 41.0
DCAR_014163 Daucus carota HOM05D008015 ORTHO05D009180 3.7e-14 82.4 153 41.2
Glyma.11G215300 Glycine max HOM05D008015 ORTHO05D009180 3.7e-14 82.4 134 42.5
MSTRG.3702 Avicennia marina HOM05D008015 ORTHO05D009180 4.9e-14 82.0 148 38.5
FvH4_1g30203 Fragaria vesca HOM05D008015 ORTHO05D009180 4.9e-14 82.0 121 43.8
FAN26G1918 Fragaria x ananassa HOM05D008015 ORTHO05D009180 6.4e-14 81.6 121 43.0
Thecc.04G053900 Theobroma cacao HOM05D008015 ORTHO05D009180 8.3e-14 81.3 185 32.4
MBI13_g14024_MAGBIO Magnolia biondii HOM05D008015 ORTHO05D009180 1.1e-13 80.9 103 44.7
MBI19_g08383_MAGBIO Magnolia biondii HOM05D008015 ORTHO05D009180 1.4e-13 80.5 147 38.8
Psat2g045760 Pisum sativum HOM05D008015 ORTHO05D009180 1.4e-13 80.5 93 55.9
Rhsim10G0178500 Rhododendron simsii HOM05D008015 ORTHO05D009180 1.4e-13 80.5 173 37.0
CSS0009801 Camellia sinensis var. sinensis HOM05D008015 ORTHO05D009180 4.1e-13 79.0 170 37.6
CSS0018355 Camellia sinensis var. sinensis HOM05D008015 ORTHO05D009180 4.1e-13 79.0 170 37.6
Sed0025761 Sechium edule HOM05D008015 ORTHO05D009180 5.4e-13 78.6 87 48.3
ClCG03G008850 Citrullus lanatus HOM05D008015 ORTHO05D009180 7.0e-13 78.2 142 39.4
MELO3C022825.2 Cucumis melo HOM05D008015 ORTHO05D009180 9.2e-13 77.8 96 47.9
Gohir.D07G078200 Gossypium hirsutum HOM05D008015 ORTHO05D009180 9.2e-13 77.8 93 45.2
MD09G1270500 Malus domestica HOM05D008015 ORTHO05D009180 9.2e-13 77.8 108 48.1
PSO478G3758 Papaver somniferum HOM05D008015 ORTHO05D009180 9.2e-13 77.8 167 38.3
Gohir.A07G073500 Gossypium hirsutum HOM05D008015 ORTHO05D009180 1.2e-12 77.4 146 37.0
Manes.02G078100 Manihot esculenta HOM05D008015 ORTHO05D009180 1.2e-12 77.4 111 43.2
Nn3g18370 Nelumbo nucifera HOM05D008015 ORTHO05D009180 1.2e-12 77.4 106 44.3
TWI77G0273 Tripterygium wilfordii HOM05D008015 ORTHO05D009180 1.2e-12 77.4 136 41.2
Cpa.g.sc340.4 Carica papaya HOM05D008015 ORTHO05D009180 1.6e-12 77.0 173 37.0
Gorai.001G082600 Gossypium raimondii HOM05D008015 ORTHO05D009180 1.6e-12 77.0 93 45.2
arahy.Tifrunner.gnm1.ann1.NRE7W4 Arachis hypogaea HOM05D009275 ORTHO05D009180 2.7e-12 76.3 152 36.8
CDE05G1037 Ceratophyllum demersum HOM05D008015 ORTHO05D009180 2.7e-12 76.3 154 37.7
CsaV3_5G023910 Cucumis sativus L. HOM05D009275 ORTHO05D009180 6.0e-12 75.1 146 39.0
SGA_v2.0_scaffold45G17152 Striga asiatica HOM05D008015 ORTHO05D009180 1.0e-11 74.3 154 38.3
SalBow5G5173 Salvia bowleyana HOM05D008015 ORTHO05D009180 1.7e-11 73.6 144 36.1
CANSAT35G1526 Cannabis sativa HOM05D008015 ORTHO05D009180 1.1e-10 70.9 143 38.5
Eucgr.F02874 Eucalyptus grandis HOM05D008015 ORTHO05D009180 1.5e-10 70.5 128 40.6
Actinidia17202 Actinidia chinensis HOM05D008015 ORTHO05D009180 4.3e-10 68.9 132 37.9
COL.COLO4_13422 Corchorus olitorius HOM05D009275 ORTHO05D009180 5.6e-10 68.6 92 45.7
arahy.Tifrunner.gnm1.ann1.I66ZQ3 Arachis hypogaea HOM05D009275 ORTHO05D009180 9.5e-10 67.8 153 36.6
Thhalv10027910m.g Eutrema salsugineum HOM05D009275 ORTHO05D009180 1.2e-09 67.4 176 34.7
ATR0753G067 Amborella trichopoda HOM05D008015 ORTHO05D009180 1.6e-09 67.0 115 36.5
Aqoxy1G02179 Aquilegia oxysepala HOM05D008015 ORTHO05D009180 1.6e-09 67.0 163 36.2
AL7G46310 Arabidopsis lyrata HOM05D009275 ORTHO05D009180 1.6e-09 67.0 189 33.3
Sp7g04570 Schrenkiella parvula HOM05D009275 ORTHO05D009180 1.6e-09 67.0 185 33.0
CDE05G0668 Ceratophyllum demersum HOM05D006178 ORTHO05D007504 8.0e-09 64.7 102 40.2
Lsat_1_v5_gn_8_114880 Lactuca sativa HOM05D008015 ORTHO05D009180 1.1e-08 64.3 128 35.9
BcaB06g27100 Brassica carinata HOM05D009275 ORTHO05D009180 4.0e-08 62.4 94 47.9
CARHR215350 Cardamine hirsuta HOM05D009275 ORTHO05D009180 4.0e-08 62.4 96 45.8
FAN19G3187 Fragaria x ananassa HOM05D008015 ORTHO05D009180 5.2e-08 62.0 101 40.6
TWI74G1025 Tripterygium wilfordii HOM05D008015 ORTHO05D009180 5.2e-08 62.0 126 40.5
BraA04t16736Z Brassica rapa HOM05D009275 ORTHO05D009180 6.8e-08 61.6 94 46.8
MBI13_g24899_MAGBIO Magnolia biondii HOM05D008015 ORTHO05D009180 6.8e-08 61.6 62 54.8
Aa31LG9G17500 Aethionema arabicum HOM05D009275 ORTHO05D009180 1.2e-07 60.8 99 42.4
Dinv28182 Davidia involucrata HOM05D008015 ORTHO05D009180 1.2e-07 60.8 55 56.4
BcaC02g09585 Brassica carinata HOM05D009275 ORTHO05D009180 2.0e-07 60.1 94 45.7
A04p10720 Brassica napus HOM05D009275 ORTHO05D009180 2.0e-07 60.1 93 45.2
C04p44430 Brassica napus HOM05D009275 ORTHO05D009180 2.0e-07 60.1 94 45.7
BolC4t26014H Brassica oleracea HOM05D009275 ORTHO05D009180 2.0e-07 60.1 94 45.7
Carub.0007s3272 Capsella rubella HOM05D009275 ORTHO05D009180 3.4e-07 59.3 93 44.1
AT5G37550 Arabidopsis thaliana HOM05D009275 ORTHO05D009180 7.5e-07 58.2 93 46.2
ATR0824G199 Amborella trichopoda HOM05D007505 ORTHO05D009476 2.9e-06 56.2 96 37.5
unitig_32.g11793 Utricularia gibba HOM05D008015 ORTHO05D009180 3.7e-06 55.8 152 36.2
Prupe.5G165400 Prunus persica HOM05D007505 ORTHO05D009476 4.9e-06 55.5 110 39.1


User provided reference genes

Program Settings