Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr17g0344771 Lupinus albus HOM05D000028 ORTHO05D006165 8.9e-41 169.9 87 100.0
Lalb_Chr10g0103061 Lupinus albus HOM05D000028 ORTHO05D006165 5.2e-33 144.1 86 87.2
Medtr5g069040 Medicago truncatula HOM05D000028 ORTHO05D006165 1.7e-31 139.0 83 79.5
Medtr5g068790 Medicago truncatula HOM05D000028 ORTHO05D006165 1.1e-30 136.3 83 78.3
TPR.G5815 Trifolium pratense HOM05D000028 ORTHO05D006165 1.4e-30 136.0 83 75.9
Glyma.06G138300 Glycine max HOM05D000028 ORTHO05D006165 2.1e-29 132.1 83 75.9
TPR.G5790 Trifolium pratense HOM05D000028 ORTHO05D006165 4.6e-29 131.0 83 75.9
LjContig00155g0002347 Lotus japonicus HOM05D000028 ORTHO05D006165 1.0e-28 129.8 86 75.6
Psat2g061960 Pisum sativum HOM05D000028 ORTHO05D006165 1.7e-28 129.0 86 73.3
Glyma.02G222100 Glycine max HOM05D000028 ORTHO05D006165 3.0e-28 128.3 86 72.1
Phvul.009G039200 Phaseolus vulgaris HOM05D000028 ORTHO05D006165 2.5e-27 125.2 83 72.3
Psat2g061920 Pisum sativum HOM05D000028 ORTHO05D006165 7.3e-27 123.6 86 72.1
Cfa016142 Carpinus fangiana HOM05D002523 ORTHO05D002951 1.2e-26 122.9 86 68.6
CiPaw.05G207400 Carya illinoinensis HOM05D000028 ORTHO05D006165 2.8e-26 121.7 86 66.3
TPR.G5833 Trifolium pratense HOM05D000028 ORTHO05D006165 2.8e-26 121.7 92 66.3
Medtr3g019050 Medicago truncatula HOM05D000028 ORTHO05D006165 3.6e-26 121.3 83 72.3
Glyma.14G189200 Glycine max HOM05D000028 ORTHO05D006165 1.1e-25 119.8 84 66.7
Thecc.03G211000 Theobroma cacao HOM05D000028 ORTHO05D006165 1.1e-25 119.8 86 67.4
Duzib068G0829 Durio zibethinus HOM05D000028 ORTHO05D006165 1.4e-25 119.4 86 68.6
MD01G1230200 Malus domestica HOM05D000028 ORTHO05D006165 4.0e-25 117.9 86 65.1
Atru.chr12.2465 Acer truncatum HOM05D000028 ORTHO05D006165 8.9e-25 116.7 83 66.3
Atru.chr12.2469 Acer truncatum HOM05D000028 ORTHO05D006165 8.9e-25 116.7 83 66.3
Atru.chr12.2536 Acer truncatum HOM05D000028 ORTHO05D006165 8.9e-25 116.7 83 66.3
Glyma.02G222000 Glycine max HOM05D000028 ORTHO05D006165 1.2e-24 116.3 84 63.1
arahy.Tifrunner.gnm1.ann1.6MS9TD Arachis hypogaea HOM05D000028 ORTHO05D006165 1.5e-24 115.9 86 69.8
LjContig00155g0011791 Lotus japonicus HOM05D000028 ORTHO05D006165 3.4e-24 114.8 75 70.7
QL09p006522 Quercus lobata HOM05D000028 ORTHO05D006165 4.4e-24 114.4 86 62.8
Gohir.A12G245400 Gossypium hirsutum HOM05D000028 ORTHO05D006165 5.8e-24 114.0 86 65.1
Psat7g236960 Pisum sativum HOM05D000028 ORTHO05D006165 5.8e-24 114.0 85 68.2
arahy.Tifrunner.gnm1.ann1.BCU2N4 Arachis hypogaea HOM05D000028 ORTHO05D006165 7.5e-24 113.6 86 68.6
Gohir.D12G246100 Gossypium hirsutum HOM05D000028 ORTHO05D006165 7.5e-24 113.6 86 65.1
Gorai.008G263800 Gossypium raimondii HOM05D000028 ORTHO05D006165 7.5e-24 113.6 86 65.1
VMungo0647G2198 Vigna mungo HOM05D000028 ORTHO05D006165 7.5e-24 113.6 86 66.3
Prupe.2G320900 Prunus persica HOM05D000028 ORTHO05D006165 1.7e-23 112.5 87 62.1
COL.COLO4_14388 Corchorus olitorius HOM05D000028 ORTHO05D006165 2.9e-23 111.7 86 62.8
FvH4_7g33100 Fragaria vesca HOM05D000028 ORTHO05D006165 2.9e-23 111.7 86 60.5
FAN03G0459 Fragaria x ananassa HOM05D000028 ORTHO05D006165 3.7e-23 111.3 86 60.5
Dinv17287 Davidia involucrata HOM05D000028 ORTHO05D006165 6.4e-23 110.5 84 64.3
FAN10G1022 Fragaria x ananassa HOM05D000028 ORTHO05D006165 6.4e-23 110.5 86 60.5
FAN10G2170 Fragaria x ananassa HOM05D000028 ORTHO05D006165 6.4e-23 110.5 86 60.5
RcHm_v2.0_Chr1g0383151 Rosa chinensis HOM05D000028 ORTHO05D006165 6.4e-23 110.5 86 60.5
CiPaw.06G039100 Carya illinoinensis HOM05D000028 ORTHO05D006165 8.3e-23 110.2 86 61.6
Sabra12G0036300 Salix brachista HOM05D000028 ORTHO05D006165 8.3e-23 110.2 85 62.4
FAN01G0940 Fragaria x ananassa HOM05D000028 ORTHO05D006165 1.4e-22 109.4 86 59.3
CANSAT21G0777 Cannabis sativa HOM05D000028 ORTHO05D006165 1.9e-22 109.0 87 64.4
CANSAT21G1010 Cannabis sativa HOM05D000028 ORTHO05D006165 1.9e-22 109.0 87 64.4
Hma1.2p1_0415F.1_g148310 Hydrangea macrophylla HOM05D000028 ORTHO05D006165 1.9e-22 109.0 82 65.9
CSS0030757 Camellia sinensis var. sinensis HOM05D000028 ORTHO05D006165 4.1e-22 107.8 86 60.5
vmacro06464 Vaccinium macrocarpon HOM05D000028 ORTHO05D006165 4.1e-22 107.8 84 60.7
Dinv29200 Davidia involucrata HOM05D000028 ORTHO05D006165 7.1e-22 107.1 86 59.3
Potri.012G007700 Populus trichocarpa HOM05D000028 ORTHO05D006165 1.2e-21 106.3 86 61.6
PGR042G1905 Punica granatum HOM05D000028 ORTHO05D006165 2.7e-21 105.1 86 58.1
Sed0025832 Sechium edule HOM05D000028 ORTHO05D006165 3.5e-21 104.8 82 62.2
Sc07g0009810 Simmondsia chinensis HOM05D000028 ORTHO05D006165 7.8e-21 103.6 86 59.3
Eucgr.A00970 Eucalyptus grandis HOM05D000028 ORTHO05D006165 1.3e-20 102.8 82 61.0
Gohir.D04G000005 Gossypium hirsutum HOM05D000028 ORTHO05D006165 1.3e-20 102.8 87 58.6
Gohir.D04G000700 Gossypium hirsutum HOM05D000028 ORTHO05D006165 1.3e-20 102.8 87 58.6
Lj1A1030G34 Lonicera japonica HOM05D000028 ORTHO05D006165 1.7e-20 102.4 70 70.0
Gorai.012G001700 Gossypium raimondii HOM05D000028 ORTHO05D006165 3.9e-20 101.3 87 57.5
CSS0029142 Camellia sinensis var. sinensis HOM05D000028 ORTHO05D006165 1.1e-19 99.8 84 57.1
CSS0021266 Camellia sinensis var. sinensis HOM05D000028 ORTHO05D006165 1.9e-19 99.0 86 58.1
Cpa.g.sc3.172 Carica papaya HOM05D000028 ORTHO05D006165 4.3e-19 97.8 76 60.5
TAR375G0937 Trochodendron aralioides HOM05D000028 ORTHO05D006165 7.3e-19 97.1 84 57.1
Cc01_g04610 Coffea canephora HOM05D000028 ORTHO05D006165 9.5e-19 96.7 82 53.7
PGR083G1462 Punica granatum HOM05D000028 ORTHO05D006165 1.6e-18 95.9 76 59.2
vmacro06462 Vaccinium macrocarpon HOM05D000028 ORTHO05D006165 1.6e-18 95.9 82 56.1
CANSAT21G0119 Cannabis sativa HOM05D000028 ORTHO05D006165 2.1e-18 95.5 69 65.2
Oeu017363.1 Olea europaea HOM05D000028 ORTHO05D006165 2.1e-18 95.5 76 59.2
Actinidia34281 Actinidia chinensis HOM05D000028 ORTHO05D006165 2.8e-18 95.1 76 55.3
Peaxi162Scf00542g00017 Petunia axillaris HOM05D000028 ORTHO05D006165 2.8e-18 95.1 79 57.0
SGA_v2.0_scaffold18G08484 Striga asiatica HOM05D000028 ORTHO05D006165 2.8e-18 95.1 84 53.6
Solyc03g080070.4 Solanum lycopersicum HOM05D000028 ORTHO05D006165 4.7e-18 94.4 83 54.2
CAN.G303.44 Capsicum annuum HOM05D000028 ORTHO05D006165 6.2e-18 94.0 86 53.5
Hund21075 Selenicereus undatus HOM05D000028 ORTHO05D006165 8.1e-18 93.6 72 59.7
Sopen03g021800 Solanum pennellii HOM05D000028 ORTHO05D006165 8.1e-18 93.6 83 54.2
Peaxi162Scf01026g00264 Petunia axillaris HOM05D000028 ORTHO05D006165 1.1e-17 93.2 83 54.2
CANSAT21G1254 Cannabis sativa HOM05D000028 ORTHO05D006165 2.4e-17 92.0 91 58.2
Hund09730 Selenicereus undatus HOM05D000028 ORTHO05D006165 2.4e-17 92.0 77 59.7
Haze_00318 Corylus avellana HOM05D000028 ORTHO05D006165 3.1e-17 91.7 65 70.8
Migut.F00134 Erythranthe guttata HOM05D000028 ORTHO05D006165 3.1e-17 91.7 83 55.4
Phvul.008G188800 Phaseolus vulgaris HOM05D000028 ORTHO05D006165 5.2e-17 90.9 65 73.8
Nn6g33769 Nelumbo nucifera HOM05D000028 ORTHO05D006165 8.9e-17 90.1 86 48.8
SGA_v2.0_scaffold5G02751 Striga asiatica HOM05D000028 ORTHO05D006165 1.2e-16 89.7 84 52.4
Sabra12G0009200 Salix brachista HOM05D000028 ORTHO05D006165 1.5e-16 89.4 85 54.1
Cpa.g.sc3.173 Carica papaya HOM05D000028 ORTHO05D006165 2.0e-16 89.0 70 60.0
Medtr5g089390 Medicago truncatula HOM05D000028 ORTHO05D006165 2.6e-16 88.6 83 55.4
SalBow4G1903 Salvia bowleyana HOM05D000028 ORTHO05D006165 2.6e-16 88.6 76 55.3
SalBow4G2108 Salvia bowleyana HOM05D000028 ORTHO05D006165 2.6e-16 88.6 76 55.3
Rhsim03G0217300 Rhododendron simsii HOM05D000028 ORTHO05D006165 7.6e-16 87.0 70 58.6
Cc03_g14930 Coffea canephora HOM05D000028 ORTHO05D006165 8.4e-15 83.6 86 40.7
MBI04_g33446_MAGBIO Magnolia biondii HOM05D000028 ORTHO05D006165 1.1e-14 83.2 84 51.2
Lalb_Chr17g0344801 Lupinus albus HOM05D000028 ORTHO05D006165 3.2e-14 81.6 49 89.8
DCAR_014596 Daucus carota HOM05D000028 ORTHO05D006165 5.4e-14 80.9 79 50.6
Sc13g0010620 Simmondsia chinensis HOM05D000028 ORTHO05D006165 1.6e-13 79.3 83 49.4
HPP92_008984 Vanilla planifolia HOM05D000028 ORTHO05D006165 1.6e-13 79.3 80 47.5
Ah.07g204340 Amaranthus hybridus HOM05D000028 ORTHO05D006165 7.8e-13 77.0 60 61.7
ClCG07G009680 Citrullus lanatus HOM05D000028 ORTHO05D006165 2.3e-12 75.5 71 56.3
Peaxi162Scf01026g00265 Petunia axillaris HOM05D000028 ORTHO05D006165 2.3e-12 75.5 106 36.8
MBI04_g33445_MAGBIO Magnolia biondii HOM05D000028 ORTHO05D006165 3.9e-12 74.7 84 46.4
Lj6C588G11 Lonicera japonica HOM05D000028 ORTHO05D006165 5.1e-12 74.3 76 48.7
Os10g0199500 Oryza sativa ssp. japonica HOM05D000028 ORTHO05D006165 1.1e-11 73.2 75 50.7
Os10g0198900 Oryza sativa ssp. japonica HOM05D000028 ORTHO05D006165 2.5e-11 72.0 75 49.3
HPP92_022289 Vanilla planifolia HOM05D000028 ORTHO05D006165 2.5e-11 72.0 72 54.2
Nitab4.5_0000021g0050 Nicotiana tabacum HOM05D000028 ORTHO05D006165 3.6e-10 68.2 64 54.7
Os08g0402800 Oryza sativa ssp. japonica HOM05D000028 ORTHO05D006165 2.4e-09 65.5 72 47.2
Zm00001eb112240 Zea mays HOM05D000028 ORTHO05D006165 2.6e-08 62.0 75 46.7
Os10g0197700 Oryza sativa ssp. japonica HOM05D000028 ORTHO05D006165 5.8e-08 60.8 70 41.4
Os12g0288000 Oryza sativa ssp. japonica HOM05D000028 ORTHO05D006165 9.9e-08 60.1 72 45.8
Eucgr.H01303 Eucalyptus grandis HOM05D000028 ORTHO05D004287 1.1e-06 56.6 72 40.3
arahy.Tifrunner.gnm1.ann1.N5ZUM1 Arachis hypogaea HOM05D000028 ORTHO05D000296 2.4e-06 55.5 76 36.8
Os05g0493800 Oryza sativa ssp. japonica HOM05D000028 ORTHO05D000296 3.2e-06 55.1 71 39.4
Zm00001eb229370 Zea mays HOM05D000028 ORTHO05D006165 5.4e-06 54.3 71 42.3
CANSAT56G1688 Cannabis sativa HOM05D000028 ORTHO05D000296 7.1e-06 53.9 80 33.8
Glyma.15G227700 Glycine max HOM05D000028 ORTHO05D000296 7.1e-06 53.9 79 38.0
LjContig00267g0027350 Lotus japonicus HOM05D000028 ORTHO05D000296 9.3e-06 53.5 76 39.5


User provided reference genes

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