Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr17g0343301 Lupinus albus HOM05D008314 ORTHO05D010369 3.3e-46 188.0 92 100.0
Medtr8g022990 Medicago truncatula HOM05D008314 ORTHO05D010369 5.2e-15 84.3 76 61.8
arahy.Tifrunner.gnm1.ann1.K03VIU Arachis hypogaea HOM05D008314 ORTHO05D010369 1.2e-14 83.2 78 51.3
arahy.Tifrunner.gnm1.ann1.0KI29H Arachis hypogaea HOM05D008314 ORTHO05D010369 1.5e-14 82.8 78 51.3
Glyma.16G013200 Glycine max HOM05D008314 ORTHO05D010369 3.4e-14 81.6 75 53.3
Rhsim12G0213100 Rhododendron simsii HOM05D008314 ORTHO05D010369 3.4e-14 81.6 95 44.2
Phvul.010G123800 Phaseolus vulgaris HOM05D008314 ORTHO05D010369 4.4e-14 81.3 79 54.4
RcHm_v2.0_Chr2g0147741 Rosa chinensis HOM05D008314 ORTHO05D010369 1.4e-12 76.3 83 49.4
Psat4g165800 Pisum sativum HOM05D008314 ORTHO05D010369 4.1e-12 74.7 46 71.7
Manes.11G013300 Manihot esculenta HOM05D008314 ORTHO05D010369 5.4e-12 74.3 87 48.3
PSO724G1385 Papaver somniferum HOM05D008314 ORTHO05D010369 5.4e-12 74.3 78 44.9
Thecc.03G325500 Theobroma cacao HOM05D008314 ORTHO05D010369 9.2e-12 73.6 77 46.8
CsaV3_7G033990 Cucumis sativus L. HOM05D008314 ORTHO05D010369 1.2e-11 73.2 75 45.3
FvH4_6g35740 Fragaria vesca HOM05D008314 ORTHO05D010369 1.2e-11 73.2 85 44.7
FAN09G4263 Fragaria x ananassa HOM05D008314 ORTHO05D010369 1.2e-11 73.2 85 44.7
Atru.chr1.4110 Acer truncatum HOM05D008314 ORTHO05D010369 1.6e-11 72.8 83 45.8
CSS0041009 Camellia sinensis var. sinensis HOM05D008314 ORTHO05D010369 1.6e-11 72.8 77 46.8
QL05p001376 Quercus lobata HOM05D008314 ORTHO05D010369 1.6e-11 72.8 76 44.7
Dinv37824 Davidia involucrata HOM05D008314 ORTHO05D010369 2.0e-11 72.4 76 46.1
FAN05G1710 Fragaria x ananassa HOM05D008314 ORTHO05D010369 2.0e-11 72.4 85 44.7
Potri.003G072000 Populus trichocarpa HOM05D008314 ORTHO05D010369 2.0e-11 72.4 79 46.8
Thecc.06G129300 Theobroma cacao HOM05D008314 ORTHO05D010369 2.0e-11 72.4 76 46.1
ClCG09G001340 Citrullus lanatus HOM05D008314 ORTHO05D010369 2.7e-11 72.0 92 42.4
SalBow6G0833 Salvia bowleyana HOM05D008314 ORTHO05D010369 3.5e-11 71.6 89 41.6
Duzib235G1505 Durio zibethinus HOM05D008314 ORTHO05D010369 4.5e-11 71.2 74 48.6
Cc04_g00790 Coffea canephora HOM05D008314 ORTHO05D010369 5.9e-11 70.9 79 45.6
TWI14G0587 Tripterygium wilfordii HOM05D008314 ORTHO05D010369 7.8e-11 70.5 92 41.3
MELO3C024311.2 Cucumis melo HOM05D008314 ORTHO05D010369 1.0e-10 70.1 82 42.7
Duzib160G0115 Durio zibethinus HOM05D008314 ORTHO05D010369 1.0e-10 70.1 76 39.5
Nn6g35721 Nelumbo nucifera HOM05D008314 ORTHO05D010369 1.0e-10 70.1 79 44.3
Prupe.3G031600 Prunus persica HOM05D008314 ORTHO05D010369 1.0e-10 70.1 62 50.0
Cpa.g.sc25.184 Carica papaya HOM05D008314 ORTHO05D010369 1.3e-10 69.7 74 44.6
PSO135G0082 Papaver somniferum HOM05D008314 ORTHO05D010369 1.7e-10 69.3 67 49.3
CiPaw.01G212000 Carya illinoinensis HOM05D008314 ORTHO05D010369 2.3e-10 68.9 75 41.3
COL.COLO4_30857 Corchorus olitorius HOM05D008314 ORTHO05D010369 2.3e-10 68.9 60 51.7
Oeu008398.2 Olea europaea HOM05D008314 ORTHO05D010369 2.9e-10 68.6 81 45.7
TAR070G0001 Trochodendron aralioides HOM05D008314 ORTHO05D010369 2.9e-10 68.6 77 46.8
Gohir.D06G149000 Gossypium hirsutum HOM05D008314 ORTHO05D010369 5.0e-10 67.8 78 38.5
Gorai.010G173500 Gossypium raimondii HOM05D008314 ORTHO05D010369 5.0e-10 67.8 75 40.0
Oeu059021.1 Olea europaea HOM05D008314 ORTHO05D010369 1.1e-09 66.6 77 44.2
Sed0005090 Sechium edule HOM05D008314 ORTHO05D010369 1.1e-09 66.6 96 41.7
MBI13_g01687_MAGBIO Magnolia biondii HOM05D008314 ORTHO05D010369 3.3e-09 65.1 80 37.5
ATR0099G003 Amborella trichopoda HOM05D008314 ORTHO05D010369 5.6e-09 64.3 60 46.7
FAN02G2954 Fragaria x ananassa HOM05D008314 ORTHO05D010369 7.3e-09 63.9 48 52.1
Gohir.A06G143350 Gossypium hirsutum HOM05D008314 ORTHO05D010369 2.1e-08 62.4 74 37.8
Actinidia24433 Actinidia chinensis HOM05D008314 ORTHO05D010369 2.8e-08 62.0 79 43.0
CiPaw.01G212100 Carya illinoinensis HOM05D008314 ORTHO05D010369 2.8e-08 62.0 41 53.7
Ciclev10027008m.g Citrus clementina HOM05D008314 ORTHO05D010369 4.7e-08 61.2 77 36.4
Duzib160G0571 Durio zibethinus HOM05D008314 ORTHO05D010369 4.7e-08 61.2 76 39.5
Rhsim08G0244000 Rhododendron simsii HOM05D008314 ORTHO05D010369 4.7e-08 61.2 86 43.0
Os02g0564600 Oryza sativa ssp. japonica HOM05D008314 ORTHO05D010369 6.1e-08 60.8 35 65.7
Ciclev10026853m.g Citrus clementina HOM05D008314 ORTHO05D010369 8.0e-08 60.5 32 68.8
MD09G1173500 Malus domestica HOM05D008314 ORTHO05D010369 8.0e-08 60.5 98 39.8
SEGI_28829 Sequoiadendron giganteum HOM05D008314 ORTHO05D010369 8.0e-08 60.5 80 30.0
AUR62001414 Chenopodium quinoa HOM05D008314 ORTHO05D010369 1.4e-07 59.7 82 39.0
AUR62025623 Chenopodium quinoa HOM05D008314 ORTHO05D010369 1.4e-07 59.7 38 60.5
Os03g0400700 Oryza sativa ssp. japonica HOM05D008314 ORTHO05D010369 6.8e-07 57.4 85 37.6
Zm00001eb182560 Zea mays HOM05D008314 ORTHO05D010369 8.9e-07 57.0 45 55.6
Oeu059020.1 Olea europaea HOM05D008314 ORTHO05D010369 2.6e-06 55.5 35 62.9


User provided reference genes

Program Settings