Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr17g0343131 Lupinus albus HOM05D006867 ORTHO05D008676 0.0e+00 1262.3 660 100.0
Lalb_Chr10g0101011 Lupinus albus HOM05D006867 ORTHO05D008676 4.2e-292 1007.7 645 82.9
arahy.Tifrunner.gnm1.ann1.L7530T Arachis hypogaea HOM05D006867 ORTHO05D008676 3.6e-259 898.3 688 73.7
arahy.Tifrunner.gnm1.ann1.Y7T28V Arachis hypogaea HOM05D006867 ORTHO05D008676 4.0e-258 894.8 686 73.8
Glyma.16G015800 Glycine max HOM05D006867 ORTHO05D008676 1.2e-254 883.2 655 73.9
Glyma.07G047300 Glycine max HOM05D006867 ORTHO05D008676 2.5e-252 875.5 652 72.7
Lj3g0022605 Lotus japonicus HOM05D006867 ORTHO05D008676 6.8e-250 867.5 654 73.1
Phvul.010G121700 Phaseolus vulgaris HOM05D006867 ORTHO05D008676 2.8e-248 862.1 662 73.3
Medtr8g023750 Medicago truncatula HOM05D006867 ORTHO05D008676 5.4e-247 857.8 654 71.6
Ca_23461_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 7.0e-247 857.4 650 71.8
Ca_23474_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 7.0e-247 857.4 650 71.8
VMungo0331G1883 Vigna mungo HOM05D006867 ORTHO05D008676 4.5e-246 854.7 655 72.4
Psat0s2980g0160 Pisum sativum HOM05D006867 ORTHO05D008676 5.2e-242 841.3 653 70.8
TPR.G32787 Trifolium pratense HOM05D006867 ORTHO05D008676 9.2e-239 830.5 640 72.0
QL08p048171 Quercus lobata HOM05D006867 ORTHO05D008676 5.2e-218 761.5 615 67.0
Thecc.01G329400 Theobroma cacao HOM05D006867 ORTHO05D008676 4.4e-217 758.4 651 63.3
CiPaw.02G046400 Carya illinoinensis HOM05D006867 ORTHO05D008676 4.6e-214 748.4 651 63.3
Ciclev10019260m.g Citrus clementina HOM05D006867 ORTHO05D008676 3.3e-212 742.3 652 61.7
COL.COLO4_23081 Corchorus olitorius HOM05D006867 ORTHO05D008676 1.2e-211 740.3 657 61.8
Manes.01G237400 Manihot esculenta HOM05D006867 ORTHO05D008676 1.2e-211 740.3 651 63.9
Potri.002G183500 Populus trichocarpa HOM05D006867 ORTHO05D008676 1.8e-210 736.5 652 63.7
GSVIVG01027485001 Vitis vinifera HOM05D006867 ORTHO05D008676 7.6e-209 731.1 594 64.5
Atru.chr5.813 Acer truncatum HOM05D006867 ORTHO05D008676 1.1e-207 727.2 650 61.7
CANSAT56G0208 Cannabis sativa HOM05D006867 ORTHO05D008676 4.2e-207 725.3 655 60.0
Potri.014G109500 Populus trichocarpa HOM05D006867 ORTHO05D008676 9.3e-207 724.2 646 62.8
Haze_15774 Corylus avellana HOM05D006867 ORTHO05D008676 1.2e-206 723.8 647 63.7
Dinv32661 Davidia involucrata HOM05D006867 ORTHO05D008676 2.7e-206 722.6 617 63.0
CANSAT56G2490 Cannabis sativa HOM05D006867 ORTHO05D008676 6.0e-206 721.5 655 59.8
Sabra02G0132100 Salix brachista HOM05D006867 ORTHO05D008676 1.1e-204 717.2 648 62.5
Sabra14G0080800 Salix brachista HOM05D006867 ORTHO05D008676 1.5e-204 716.8 633 63.8
Actinidia08011 Actinidia chinensis HOM05D006867 ORTHO05D008676 1.4e-202 710.3 650 59.1
Gorai.008G133000 Gossypium raimondii HOM05D006867 ORTHO05D008676 3.4e-201 705.7 656 61.3
Gohir.A12G118400 Gossypium hirsutum HOM05D006867 ORTHO05D008676 9.9e-201 704.1 655 60.6
Gohir.D12G122200 Gossypium hirsutum HOM05D006867 ORTHO05D008676 6.4e-200 701.4 656 59.5
Cfa003709 Carpinus fangiana HOM05D006867 ORTHO05D008676 1.9e-199 699.9 645 61.7
Prupe.2G203900 Prunus persica HOM05D006867 ORTHO05D008676 1.5e-196 690.3 652 60.0
EL10Ac9g22256 Beta vulgaris HOM05D006867 ORTHO05D008676 6.9e-194 681.4 658 57.1
Lj9A610G56 Lonicera japonica HOM05D006867 ORTHO05D008676 2.0e-193 679.9 648 58.8
MBI11_g13783_MAGBIO Magnolia biondii HOM05D006867 ORTHO05D008676 2.6e-193 679.5 645 58.1
Sed0008932 Sechium edule HOM05D006867 ORTHO05D008676 5.8e-193 678.3 650 58.2
Cc00_g15760 Coffea canephora HOM05D006867 ORTHO05D008676 2.2e-192 676.4 652 57.2
THA.LOC104817409 Tarenaya hassleriana HOM05D006867 ORTHO05D008676 4.9e-192 675.2 659 57.4
MD07G1165200 Malus domestica HOM05D006867 ORTHO05D008676 9.3e-191 671.0 647 58.7
TAR629G2918 Trochodendron aralioides HOM05D006867 ORTHO05D008676 1.2e-190 670.6 648 57.7
Aa31LG1G28260 Aethionema arabicum HOM05D006867 ORTHO05D008676 1.9e-188 663.3 654 55.8
vmacro08516 Vaccinium macrocarpon HOM05D006867 ORTHO05D008676 9.6e-188 661.0 697 54.1
ClCG05G000080 Citrullus lanatus HOM05D006867 ORTHO05D008676 1.3e-187 660.6 534 62.9
MD01G1098500 Malus domestica HOM05D006867 ORTHO05D008676 1.6e-187 660.2 653 58.8
FAN06G0390 Fragaria x ananassa HOM05D006867 ORTHO05D008676 2.8e-187 659.4 650 56.5
Eucgr.L00743 Eucalyptus grandis HOM05D006867 ORTHO05D008676 1.1e-186 657.5 658 56.8
FvH4_7g18270 Fragaria vesca HOM05D006867 ORTHO05D008676 6.9e-186 654.8 651 56.5
FAN06G3784 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.5e-185 653.7 651 56.5
CsaV3_3G007140 Cucumis sativus L. HOM05D006867 ORTHO05D008676 2.6e-185 652.9 652 55.8
Nitab4.5_0004754g0040 Nicotiana tabacum HOM05D006867 ORTHO05D008676 2.6e-185 652.9 650 54.6
CAN.G90.6 Capsicum annuum HOM05D006867 ORTHO05D008676 1.3e-184 650.6 647 55.3
AL4G46360 Arabidopsis lyrata HOM05D006867 ORTHO05D008676 2.2e-184 649.8 650 55.8
Sopen08g006420 Solanum pennellii HOM05D006867 ORTHO05D008676 2.2e-184 649.8 524 62.4
RcHm_v2.0_Chr1g0361851 Rosa chinensis HOM05D006867 ORTHO05D008676 3.8e-184 649.0 654 55.2
FAN01G1143 Fragaria x ananassa HOM05D006867 ORTHO05D008676 6.5e-184 648.3 609 58.3
FAN03G0961 Fragaria x ananassa HOM05D006867 ORTHO05D008676 6.5e-184 648.3 609 58.3
Ah.01g010880 Amaranthus hybridus HOM05D006867 ORTHO05D008676 5.5e-183 645.2 653 54.7
Rhsim04G0175800 Rhododendron simsii HOM05D006867 ORTHO05D008676 7.1e-183 644.8 596 57.9
Nitab4.5_0000348g0180 Nicotiana tabacum HOM05D006867 ORTHO05D008676 9.3e-183 644.4 660 53.3
Sc08g0001320 Simmondsia chinensis HOM05D006867 ORTHO05D008676 9.3e-183 644.4 650 56.3
AUR62010330 Chenopodium quinoa HOM05D006867 ORTHO05D008676 1.6e-182 643.7 649 55.3
Lsat_1_v5_gn_3_39660 Lactuca sativa HOM05D006867 ORTHO05D008676 1.6e-182 643.7 654 54.9
Oeu032684.1 Olea europaea HOM05D006867 ORTHO05D008676 1.6e-182 643.7 655 55.1
FAN10G4369 Fragaria x ananassa HOM05D006867 ORTHO05D008676 2.7e-182 642.9 648 54.8
AUR62039056 Chenopodium quinoa HOM05D006867 ORTHO05D008676 3.5e-182 642.5 646 55.0
Migut.I01214 Erythranthe guttata HOM05D006867 ORTHO05D008676 7.9e-182 641.3 664 53.8
Aqoxy5G04385 Aquilegia oxysepala HOM05D006867 ORTHO05D008676 1.0e-181 641.0 661 54.6
Carub.0004s2962 Capsella rubella HOM05D006867 ORTHO05D008676 3.0e-181 639.4 649 56.7
ATR0824G236 Amborella trichopoda HOM05D006867 ORTHO05D008676 3.9e-181 639.0 658 53.6
Thhalv10001357m.g Eutrema salsugineum HOM05D006867 ORTHO05D008676 1.1e-180 637.5 658 55.9
Sp4g28920 Schrenkiella parvula HOM05D006867 ORTHO05D008676 1.5e-180 637.1 654 55.0
Hund00158 Selenicereus undatus HOM05D006867 ORTHO05D008676 2.5e-180 636.3 498 64.7
CARHR142250 Cardamine hirsuta HOM05D006867 ORTHO05D008676 4.8e-179 632.1 652 55.8
TWI59G0124 Tripterygium wilfordii HOM05D006867 ORTHO05D008676 4.8e-179 632.1 655 55.1
HanXRQChr17g0542101 Helianthus annuus HOM05D006867 ORTHO05D008676 1.4e-178 630.6 641 55.7
FAN10G3600 Fragaria x ananassa HOM05D006867 ORTHO05D008676 9.0e-178 627.9 650 54.2
HanXRQChr15g0480381 Helianthus annuus HOM05D006867 ORTHO05D008676 2.0e-177 626.7 626 55.0
MSTRG.10869 Avicennia marina HOM05D006867 ORTHO05D008676 3.4e-177 625.9 664 53.0
AT2G46900 Arabidopsis thaliana HOM05D006867 ORTHO05D008676 2.2e-176 623.2 650 54.3
Hma1.2p1_0074F.1_g039020 Hydrangea macrophylla HOM05D006867 ORTHO05D008676 6.5e-176 621.7 435 69.7
PSO782G1247 Papaver somniferum HOM05D006867 ORTHO05D008676 5.5e-175 618.6 666 53.6
Zm00001eb102740 Zea mays HOM05D006867 ORTHO05D008676 2.1e-174 616.7 643 53.7
SGA_v2.0_scaffold122G33256 Striga asiatica HOM05D006867 ORTHO05D008676 6.1e-174 615.1 535 59.1
SalBow6G1414 Salvia bowleyana HOM05D006867 ORTHO05D008676 6.7e-173 611.7 649 53.2
Os09g0514900 Oryza sativa ssp. japonica HOM05D006867 ORTHO05D008676 9.7e-172 607.8 643 51.5
BolC4t21761H Brassica oleracea HOM05D006867 ORTHO05D008676 4.5e-169 599.0 649 54.5
HPP92_013529 Vanilla planifolia HOM05D006867 ORTHO05D008676 5.9e-169 598.6 648 52.6
C04p01080 Brassica napus HOM05D006867 ORTHO05D008676 1.4e-167 594.0 638 54.7
FAN01G0521 Fragaria x ananassa HOM05D006867 ORTHO05D008676 9.4e-167 591.3 467 62.1
A05p00940 Brassica napus HOM05D006867 ORTHO05D008676 1.6e-166 590.5 648 53.5
CSS0030251 Camellia sinensis var. sinensis HOM05D006867 ORTHO05D008676 2.3e-165 586.6 546 58.6
ECA246G2438 Erigeron canadensis HOM05D006867 ORTHO05D008676 1.1e-159 567.8 628 51.6
DCAR_022120 Daucus carota HOM05D006867 ORTHO05D008676 6.5e-152 542.0 629 49.8
Peaxi162Scf01205g00180 Petunia axillaris HOM05D006867 ORTHO05D008676 1.5e-143 514.2 389 63.5
BcaC02g12633 Brassica carinata HOM05D006867 ORTHO05D008676 2.2e-139 500.4 646 49.7
Cpa.g.sc1043.2 Carica papaya HOM05D006867 ORTHO05D008676 2.3e-136 490.3 356 66.3
MELO3C005936.2 Cucumis melo HOM05D006867 ORTHO05D008676 1.2e-126 458.0 360 63.1
CDE09G1372 Ceratophyllum demersum HOM05D006867 ORTHO05D008676 1.8e-122 444.1 504 48.6
Pp3c1_12740 Physcomitrium patens HOM05D006867 ORTHO05D008676 7.3e-119 432.2 536 44.2
AagrBONN_evm.TU.Sc2ySwM_344.4360 Anthoceros agrestis HOM05D006867 ORTHO05D008676 4.6e-113 412.9 423 49.2
Mapoly0002s0219 Marchantia polymorpha HOM05D006867 ORTHO05D008676 5.6e-111 406.0 558 41.6
SMO331G0055 Selaginella moellendorffii HOM05D006867 ORTHO05D008676 6.2e-110 402.5 487 44.6
Pp3c11_2510 Physcomitrium patens HOM05D006867 ORTHO05D008676 3.4e-108 396.7 614 41.7
CBR_g36359 Chara braunii HOM05D006867 ORTHO05D008676 6.7e-80 302.8 664 30.3
Cre11.g467639 Chlamydomonas reinhardtii HOM05D006867 ORTHO05D008676 6.2e-78 296.2 517 36.8
PRCOL_00004033 Prasinoderma coloniale HOM05D006867 ORTHO05D008676 1.3e-59 235.3 580 29.1
MCO10G037 Micromonas commoda HOM05D006867 ORTHO05D008676 3.8e-43 180.6 562 26.0
Solyc08g016090.4 Solanum lycopersicum HOM05D006867 ORTHO05D008676 3.2e-42 177.6 421 29.9
C04p72500 Brassica napus HOM05D006867 ORTHO05D008676 1.1e-26 125.9 98 59.2
BolC4t28738H Brassica oleracea HOM05D006867 ORTHO05D008676 1.1e-26 125.9 98 59.2
A04p34720 Brassica napus HOM05D006867 ORTHO05D008676 1.0e-24 119.4 98 57.1
Cfa022788 Carpinus fangiana HOM05D006867 ORTHO05D008676 1.6e-17 95.5 383 24.5


User provided reference genes

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