Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr17g0342391 Lupinus albus HOM05D024836 ORTHO05D000119 7.8e-82 307.0 146 100.0
Lalb_Chr17g0342381 Lupinus albus HOM05D024836 ORTHO05D000119 1.2e-69 266.5 149 85.9
Lalb_Chr17g0342401 Lupinus albus HOM05D024836 ORTHO05D000119 6.5e-44 181.0 151 62.3
Lalb_Chr17g0342411 Lupinus albus HOM05D024836 ORTHO05D000119 2.8e-39 165.6 153 56.9
Lalb_Chr17g0342421 Lupinus albus HOM05D000256 ORTHO05D000119 1.8e-30 136.3 147 52.4
Glyma.08G353300 Glycine max HOM05D000256 ORTHO05D000119 7.0e-14 81.3 142 35.2
Ciclev10027477m.g Citrus clementina HOM05D000256 ORTHO05D000119 1.6e-13 80.1 129 36.4
Glyma.08G353200 Glycine max HOM05D000256 ORTHO05D000119 2.6e-13 79.3 142 33.8
Lalb_Chr17g0342371 Lupinus albus HOM05D024836 ORTHO05D000119 2.6e-13 79.3 124 36.3
PGR044G2740 Punica granatum HOM05D062619 ORTHO05D000119 1.3e-12 77.0 151 30.5
Medtr1g057250 Medicago truncatula HOM05D000256 ORTHO05D000119 2.9e-12 75.9 89 39.3
Phvul.011G179400 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 3.8e-12 75.5 114 35.1
Lalb_Chr18g0044311 Lupinus albus HOM05D000256 ORTHO05D000119 1.1e-11 73.9 84 40.5
Medtr1g057370 Medicago truncatula HOM05D000256 ORTHO05D000119 1.1e-11 73.9 88 43.2
Atru.chr1.833 Acer truncatum HOM05D000256 ORTHO05D000119 1.5e-11 73.6 100 41.0
Ciclev10006952m.g Citrus clementina HOM05D000256 ORTHO05D000119 1.5e-11 73.6 90 40.0
COL.COLO4_17920 Corchorus olitorius HOM05D000256 ORTHO05D000119 2.5e-11 72.8 132 28.8
Medtr1g057240 Medicago truncatula HOM05D000256 ORTHO05D000119 3.2e-11 72.4 89 39.3
Phvul.008G064600 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 3.2e-11 72.4 93 37.6
PGR044G0367 Punica granatum HOM05D062619 ORTHO05D000119 4.2e-11 72.0 138 32.6
Lalb_Chr22g0360131 Lupinus albus HOM05D000256 ORTHO05D000119 5.5e-11 71.6 84 38.1
Potri.010G008300 Populus trichocarpa HOM05D000256 ORTHO05D000119 9.4e-11 70.9 131 32.8
CANSAT21G1227 Cannabis sativa HOM05D000256 ORTHO05D000119 1.2e-10 70.5 91 38.5
Medtr1g060930 Medicago truncatula HOM05D000256 ORTHO05D000119 1.2e-10 70.5 88 40.9
Medtr1g058400 Medicago truncatula HOM05D000256 ORTHO05D000119 1.6e-10 70.1 109 36.7
Medtr1g058430 Medicago truncatula HOM05D000256 ORTHO05D000119 1.6e-10 70.1 109 36.7
Medtr1g060940 Medicago truncatula HOM05D000256 ORTHO05D000119 1.6e-10 70.1 88 40.9
Nn1g08705 Nelumbo nucifera HOM05D000256 ORTHO05D000119 1.6e-10 70.1 130 31.5
Phvul.008G064500 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 1.6e-10 70.1 104 32.7
Prupe.5G054200 Prunus persica HOM05D000256 ORTHO05D000119 1.6e-10 70.1 125 33.6
Nn1g08741 Nelumbo nucifera HOM05D000256 ORTHO05D000119 2.1e-10 69.7 130 31.5
Nn1g08742 Nelumbo nucifera HOM05D000256 ORTHO05D000119 2.1e-10 69.7 130 31.5
TPR.G23411 Trifolium pratense HOM05D000256 ORTHO05D000119 2.1e-10 69.7 89 40.4
Glyma.08G353400 Glycine max HOM05D000256 ORTHO05D000119 3.6e-10 68.9 141 32.6
QL01p019403 Quercus lobata HOM05D000256 ORTHO05D000119 3.6e-10 68.9 98 40.8
Sc13g0002810 Simmondsia chinensis HOM05D000256 ORTHO05D000119 3.6e-10 68.9 98 34.7
TPR.G14451 Trifolium pratense HOM05D000256 ORTHO05D000119 4.7e-10 68.6 97 39.2
Actinidia25723 Actinidia chinensis HOM05D000256 ORTHO05D000119 6.1e-10 68.2 120 30.0
SGA_v2.0_scaffold57G20171 Striga asiatica HOM05D000256 ORTHO05D000119 6.1e-10 68.2 107 31.8
Atru.chr4.1735 Acer truncatum HOM05D000256 ORTHO05D000119 8.0e-10 67.8 87 35.6
Medtr1g058500 Medicago truncatula HOM05D000256 ORTHO05D000119 8.0e-10 67.8 89 39.3
Lalb_Chr18g0045921 Lupinus albus HOM05D000256 ORTHO05D000119 1.0e-09 67.4 84 35.7
Phvul.008G064300 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 1.0e-09 67.4 93 35.5
Atru.chr4.3198 Acer truncatum HOM05D000256 ORTHO05D000119 1.4e-09 67.0 134 30.6
Aqoxy5G00764 Aquilegia oxysepala HOM05D000256 ORTHO05D000119 1.8e-09 66.6 130 30.8
MD10G1085700 Malus domestica HOM05D000256 ORTHO05D000119 1.8e-09 66.6 90 40.0
CiPaw.13G128600 Carya illinoinensis HOM05D000256 ORTHO05D000119 2.3e-09 66.2 95 42.1
Sc13g0002840 Simmondsia chinensis HOM05D000256 ORTHO05D000119 4.0e-09 65.5 119 31.1
Phvul.008G064100 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 5.2e-09 65.1 93 34.4
TPR.G13616 Trifolium pratense HOM05D000256 ORTHO05D000119 5.2e-09 65.1 111 36.9
EL10Ac1g01186 Beta vulgaris HOM05D000256 ORTHO05D000119 6.7e-09 64.7 129 32.6
Phvul.003G123700 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 6.7e-09 64.7 89 34.8
Phvul.008G062800 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 6.7e-09 64.7 120 32.5
Phvul.008G063900 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 6.7e-09 64.7 93 33.3
PSO541G3450 Papaver somniferum HOM05D000256 ORTHO05D000119 8.8e-09 64.3 125 33.6
Psat6g084040 Pisum sativum HOM05D000256 ORTHO05D000119 8.8e-09 64.3 89 38.2
Sabra18G0122800 Salix brachista HOM05D000256 ORTHO05D000119 1.2e-08 63.9 86 34.9
Phvul.008G131900 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 1.5e-08 63.5 89 33.7
TPR.G13612 Trifolium pratense HOM05D000256 ORTHO05D000119 2.0e-08 63.2 111 36.0
Phvul.008G063600 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 3.3e-08 62.4 101 36.6
Phvul.008G064200 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 3.3e-08 62.4 110 33.6
TWI81G0897 Tripterygium wilfordii HOM05D000256 ORTHO05D000119 4.4e-08 62.0 99 33.3
Cc04_g12620 Coffea canephora HOM05D000256 ORTHO05D000119 5.7e-08 61.6 102 36.3
PSO170G1809 Papaver somniferum HOM05D000256 ORTHO05D000119 5.7e-08 61.6 98 32.7
Sabra18G0124400 Salix brachista HOM05D000256 ORTHO05D000119 5.7e-08 61.6 86 34.9
GSVIVG01014873001 Vitis vinifera HOM05D000256 ORTHO05D000119 5.7e-08 61.6 107 30.8
Manes.09G044300 Manihot esculenta HOM05D000256 ORTHO05D000119 7.5e-08 61.2 92 35.9
Sabra18G0125700 Salix brachista HOM05D000256 ORTHO05D000119 7.5e-08 61.2 86 34.9
Ciclev10024127m.g Citrus clementina HOM05D000256 ORTHO05D000119 9.7e-08 60.8 99 33.3
Medtr1g087960 Medicago truncatula HOM05D000256 ORTHO05D000119 9.7e-08 60.8 93 34.4
Sabra18G0122400 Salix brachista HOM05D000256 ORTHO05D000119 9.7e-08 60.8 86 33.7
Ciclev10006523m.g Citrus clementina HOM05D000256 ORTHO05D000119 1.3e-07 60.5 113 31.9
Ciclev10007141m.g Citrus clementina HOM05D000256 ORTHO05D000119 1.3e-07 60.5 113 31.9
Gohir.A04G051675 Gossypium hirsutum HOM05D000256 ORTHO05D000119 1.3e-07 60.5 85 38.8
TPR.G27594 Trifolium pratense HOM05D000256 ORTHO05D000119 1.3e-07 60.5 130 33.1
MD13G1228400 Malus domestica HOM05D000256 ORTHO05D000119 1.7e-07 60.1 97 34.0
MD06G1007700 Malus domestica HOM05D000256 ORTHO05D000119 2.2e-07 59.7 99 29.3
Manes.03G153950 Manihot esculenta HOM05D000256 ORTHO05D000119 2.2e-07 59.7 81 37.0
Phvul.008G063400 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 2.2e-07 59.7 93 32.3
Sabra18G0129000 Salix brachista HOM05D000256 ORTHO05D000119 2.2e-07 59.7 78 35.9
Lalb_Chr18g0044301 Lupinus albus HOM05D000256 ORTHO05D000119 2.8e-07 59.3 113 31.9
QL10p006074 Quercus lobata HOM05D000256 ORTHO05D000119 2.8e-07 59.3 73 35.6
Phvul.008G131700 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 4.8e-07 58.5 74 36.5
Ciclev10006461m.g Citrus clementina HOM05D000256 ORTHO05D000119 6.3e-07 58.2 86 33.7
Medtr1g058520 Medicago truncatula HOM05D000256 ORTHO05D000119 6.3e-07 58.2 89 36.0
Phvul.004G097900 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 6.3e-07 58.2 83 37.3
TPR.G20584 Trifolium pratense HOM05D000256 ORTHO05D000119 6.3e-07 58.2 122 29.5
Glyma.03G025700 Glycine max HOM05D000256 ORTHO05D000119 8.2e-07 57.8 96 33.3
Manes.03G153400 Manihot esculenta HOM05D000256 ORTHO05D000119 8.2e-07 57.8 114 28.9
TPR.G19111 Trifolium pratense HOM05D000256 ORTHO05D000119 8.2e-07 57.8 90 38.9
CSS0050460 Camellia sinensis var. sinensis HOM05D000256 ORTHO05D000119 1.1e-06 57.4 100 35.0
Gorai.009G340100 Gossypium raimondii HOM05D000256 ORTHO05D000119 1.4e-06 57.0 85 36.5
Lalb_Chr18g0044371 Lupinus albus HOM05D000256 ORTHO05D000119 1.4e-06 57.0 124 32.3
Manes.03G153550 Manihot esculenta HOM05D000256 ORTHO05D000119 1.4e-06 57.0 81 35.8
A01p37270 Brassica napus HOM05D000256 ORTHO05D000119 1.8e-06 56.6 114 32.5
Gohir.D05G317450 Gossypium hirsutum HOM05D000256 ORTHO05D000119 1.8e-06 56.6 85 36.5
CANSAT78G2337 Cannabis sativa HOM05D000256 ORTHO05D000119 2.4e-06 56.2 87 28.7
MD04G1130600 Malus domestica HOM05D000256 ORTHO05D000119 2.4e-06 56.2 85 32.9
RcHm_v2.0_Chr4g0397201 Rosa chinensis HOM05D000256 ORTHO05D000119 2.4e-06 56.2 91 38.5
Sabra18G0129400 Salix brachista HOM05D000256 ORTHO05D000119 2.4e-06 56.2 73 37.0
BcaC09g48659 Brassica carinata HOM05D000256 ORTHO05D000119 3.1e-06 55.8 90 36.7
BolC1t04691H Brassica oleracea HOM05D000256 ORTHO05D000119 3.1e-06 55.8 90 36.7
TPR.G36139 Trifolium pratense HOM05D000256 ORTHO05D000119 3.1e-06 55.8 88 34.1
Medtr1g087990 Medicago truncatula HOM05D000256 ORTHO05D000119 5.3e-06 55.1 121 27.3
Medtr1g088210 Medicago truncatula HOM05D000256 ORTHO05D000119 5.3e-06 55.1 121 27.3
Prupe.1G057800 Prunus persica HOM05D000256 ORTHO05D000119 5.3e-06 55.1 116 36.2
VMungo1383G2815 Vigna mungo HOM05D000256 ORTHO05D000119 5.3e-06 55.1 91 36.3
Lalb_Chr11g0072401 Lupinus albus HOM05D000256 ORTHO05D000119 7.0e-06 54.7 84 34.5
arahy.Tifrunner.gnm1.ann1.12347Q Arachis hypogaea HOM05D000256 ORTHO05D000119 9.1e-06 54.3 119 26.9
CARHR092330 Cardamine hirsuta HOM05D000256 ORTHO05D000119 9.1e-06 54.3 90 34.4
MD05G1264900 Malus domestica HOM05D000256 ORTHO05D000119 9.1e-06 54.3 91 34.1
Medtr4g094455 Medicago truncatula HOM05D000256 ORTHO05D000119 9.1e-06 54.3 89 31.5
Phvul.008G062900 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 9.1e-06 54.3 118 31.4
Solyc11g071900.1 Solanum lycopersicum HOM05D000256 ORTHO05D000119 9.1e-06 54.3 97 35.1
TPR.G15971 Trifolium pratense HOM05D000256 ORTHO05D000119 9.1e-06 54.3 89 34.8
TPR.G943 Trifolium pratense HOM05D000256 ORTHO05D000119 9.1e-06 54.3 88 33.0


User provided reference genes

Program Settings