Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr17g0342261 Lupinus albus HOM05D006993 ORTHO05D008336 1.2e-107 393.3 211 100.0
TPR.G5057 Trifolium pratense HOM05D006993 ORTHO05D008336 6.4e-77 291.2 215 75.8
Medtr8g028100 Medicago truncatula HOM05D006993 ORTHO05D008336 9.3e-76 287.3 216 75.0
Lj3g0006688 Lotus japonicus HOM05D006993 ORTHO05D008336 5.1e-74 281.6 217 75.6
Ca_23580_v3 Cicer arietinum L. HOM05D006993 ORTHO05D008336 4.6e-67 258.5 216 70.4
VMungo0331G1491 Vigna mungo HOM05D006993 ORTHO05D008336 4.6e-67 258.5 216 68.5
Glyma.07G059600 Glycine max HOM05D006993 ORTHO05D008336 5.1e-66 255.0 217 71.4
Phvul.010G110000 Phaseolus vulgaris HOM05D006993 ORTHO05D008336 9.6e-65 250.8 213 69.5
Glyma.16G028500 Glycine max HOM05D006993 ORTHO05D008336 2.8e-64 249.2 217 68.7
arahy.Tifrunner.gnm1.ann1.RC1IE0 Arachis hypogaea HOM05D006993 ORTHO05D008336 9.0e-63 244.2 223 65.5
GSVIVG01006115001 Vitis vinifera HOM05D006993 ORTHO05D008336 9.0e-55 217.6 164 72.6
Manes.13G058300 Manihot esculenta HOM05D006993 ORTHO05D008336 2.6e-54 216.1 205 61.5
QL09p044784 Quercus lobata HOM05D006993 ORTHO05D008336 5.8e-54 214.9 182 67.6
TAR626G0971 Trochodendron aralioides HOM05D006993 ORTHO05D008336 5.8e-54 214.9 158 72.2
FvH4_5g27060 Fragaria vesca HOM05D006993 ORTHO05D008336 7.6e-54 214.5 165 72.1
Gohir.A11G146100 Gossypium hirsutum HOM05D006993 ORTHO05D008336 7.6e-54 214.5 202 63.9
Gorai.007G162900 Gossypium raimondii HOM05D006993 ORTHO05D008336 7.6e-54 214.5 202 63.9
FAN08G3673 Fragaria x ananassa HOM05D006993 ORTHO05D008336 1.7e-53 213.4 165 71.5
Prupe.5G011000 Prunus persica HOM05D006993 ORTHO05D008336 1.1e-52 210.7 204 63.2
Atru.chr6.3467 Acer truncatum HOM05D006993 ORTHO05D008336 4.2e-52 208.8 222 59.5
CiPaw.13G058900 Carya illinoinensis HOM05D006993 ORTHO05D008336 5.5e-52 208.4 216 60.2
Thecc.01G203600 Theobroma cacao HOM05D006993 ORTHO05D008336 7.1e-52 208.0 232 58.2
MD00G1144800 Malus domestica HOM05D006993 ORTHO05D008336 1.6e-51 206.8 161 72.7
PSO675G6922 Papaver somniferum HOM05D006993 ORTHO05D008336 1.6e-51 206.8 192 60.9
FAN18G3928 Fragaria x ananassa HOM05D006993 ORTHO05D008336 2.7e-51 206.1 168 67.9
ATR0751G064 Amborella trichopoda HOM05D006993 ORTHO05D008336 6.0e-51 204.9 158 68.4
CSS0002802 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 6.0e-51 204.9 208 58.7
Duzib211G0651 Durio zibethinus HOM05D006993 ORTHO05D008336 6.0e-51 204.9 187 64.2
Ciclev10016771m.g Citrus clementina HOM05D006993 ORTHO05D008336 1.3e-50 203.8 202 62.4
Sed0005772 Sechium edule HOM05D006993 ORTHO05D008336 1.8e-50 203.4 211 56.9
Solyc09g018890.3 Solanum lycopersicum HOM05D006993 ORTHO05D008336 1.8e-50 203.4 185 61.6
Duzib138G1606 Durio zibethinus HOM05D006993 ORTHO05D008336 3.0e-50 202.6 221 58.4
Oeu013422.3 Olea europaea HOM05D006993 ORTHO05D008336 5.1e-50 201.8 200 60.5
PSO541G2665 Papaver somniferum HOM05D006993 ORTHO05D008336 6.7e-50 201.4 195 59.0
CANSAT11G1969 Cannabis sativa HOM05D006993 ORTHO05D008336 8.7e-50 201.1 214 59.8
Peaxi162Scf12724g00016 Petunia axillaris HOM05D006993 ORTHO05D008336 1.5e-49 200.3 209 57.9
Cpa.g.sc8.8 Carica papaya HOM05D006993 ORTHO05D008336 1.9e-49 199.9 211 59.7
Lsat_1_v5_gn_9_15700 Lactuca sativa HOM05D006993 ORTHO05D008336 3.3e-49 199.1 217 56.7
Sopen09g012650 Solanum pennellii HOM05D006993 ORTHO05D008336 3.3e-49 199.1 186 61.3
TWI18G0796 Tripterygium wilfordii HOM05D006993 ORTHO05D008336 4.3e-49 198.7 215 57.2
CSS0028614 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 5.7e-49 198.4 208 58.2
COL.COLO4_19719 Corchorus olitorius HOM05D006993 ORTHO05D008336 5.7e-49 198.4 220 58.6
CsaV3_5G035360 Cucumis sativus L. HOM05D006993 ORTHO05D008336 5.7e-49 198.4 188 58.5
Potri.014G172800 Populus trichocarpa HOM05D006993 ORTHO05D008336 5.7e-49 198.4 202 58.9
MSTRG.18520 Avicennia marina HOM05D006993 ORTHO05D008336 1.3e-48 197.2 159 66.7
MD15G1141400 Malus domestica HOM05D006993 ORTHO05D008336 1.3e-48 197.2 143 74.1
Nitab4.5_0009028g0040 Nicotiana tabacum HOM05D006993 ORTHO05D008336 1.6e-48 196.8 225 55.1
Sabra14G0132300 Salix brachista HOM05D006993 ORTHO05D008336 2.8e-48 196.1 202 59.4
Cfa010616 Carpinus fangiana HOM05D006993 ORTHO05D008336 3.7e-48 195.7 152 70.4
CAN.G3.14 Capsicum annuum HOM05D006993 ORTHO05D008336 8.2e-48 194.5 200 56.5
FAN04G3061 Fragaria x ananassa HOM05D006993 ORTHO05D008336 1.4e-47 193.7 164 66.5
FAN13G2105 Fragaria x ananassa HOM05D006993 ORTHO05D008336 1.8e-47 193.4 164 66.5
Actinidia23138 Actinidia chinensis HOM05D006993 ORTHO05D008336 3.1e-47 192.6 199 60.8
MELO3C012348.2 Cucumis melo HOM05D006993 ORTHO05D008336 4.1e-47 192.2 211 54.0
CSS0020795 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 9.0e-47 191.0 190 60.0
Aqoxy4G02329 Aquilegia oxysepala HOM05D006993 ORTHO05D008336 1.5e-46 190.3 178 62.9
Psat4g158880 Pisum sativum HOM05D006993 ORTHO05D008336 1.5e-46 190.3 169 69.2
PGSC0003DMG400020288 Solanum tuberosum HOM05D006993 ORTHO05D008336 7.6e-46 188.0 190 58.4
CSS0001652 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 1.0e-45 187.6 198 58.6
Gohir.D07G168900 Gossypium hirsutum HOM05D006993 ORTHO05D008336 1.0e-45 187.6 194 61.9
DCAR_018599 Daucus carota HOM05D000190 ORTHO05D008336 1.3e-45 187.2 158 66.5
Migut.D00756 Erythranthe guttata HOM05D006993 ORTHO05D008336 1.3e-45 187.2 178 60.1
Oeu049571.1 Olea europaea HOM05D006993 ORTHO05D008336 1.3e-45 187.2 199 55.8
AL3G41710 Arabidopsis lyrata HOM05D006993 ORTHO05D008336 5.0e-45 185.3 182 59.3
RcHm_v2.0_Chr7g0218061 Rosa chinensis HOM05D006993 ORTHO05D008336 6.5e-45 184.9 205 57.1
Aa31sc249G30 Aethionema arabicum HOM05D006993 ORTHO05D008336 1.1e-44 184.1 199 58.3
AT2G04039 Arabidopsis thaliana HOM05D006993 ORTHO05D008336 1.9e-44 183.3 186 58.6
ECA247G3631 Erigeron canadensis HOM05D006993 ORTHO05D008336 1.9e-44 183.3 200 54.0
Cc01_g15720 Coffea canephora HOM05D006993 ORTHO05D008336 4.2e-44 182.2 209 51.7
CDE06G2320 Ceratophyllum demersum HOM05D006993 ORTHO05D008336 5.5e-44 181.8 155 65.2
Lj2A1109T68 Lonicera japonica HOM05D006993 ORTHO05D008336 5.5e-44 181.8 140 69.3
Nn1g08444 Nelumbo nucifera HOM05D006993 ORTHO05D008336 7.1e-44 181.4 181 59.7
SalBow2G0576 Salvia bowleyana HOM05D006993 ORTHO05D008336 1.6e-43 180.3 112 75.0
PGR083G2302 Punica granatum HOM05D006993 ORTHO05D008336 2.7e-43 179.5 215 53.0
CDE03G0427 Ceratophyllum demersum HOM05D006993 ORTHO05D008336 3.5e-43 179.1 198 57.1
Thhalv10002670m.g Eutrema salsugineum HOM05D006993 ORTHO05D008336 3.5e-43 179.1 186 59.7
Potri.002G217400 Populus trichocarpa HOM05D006993 ORTHO05D008336 7.9e-43 177.9 203 55.7
vmacro02850 Vaccinium macrocarpon HOM05D006993 ORTHO05D008336 2.3e-42 176.4 202 55.4
A07p06910 Brassica napus HOM05D006993 ORTHO05D008336 3.9e-42 175.6 184 60.9
BraA07t28482Z Brassica rapa HOM05D006993 ORTHO05D008336 3.9e-42 175.6 184 60.9
Eucgr.H00675 Eucalyptus grandis HOM05D006993 ORTHO05D008336 5.1e-42 175.3 217 50.7
BcaC06g35821 Brassica carinata HOM05D006993 ORTHO05D008336 1.5e-41 173.7 183 61.2
BolC7t41517H Brassica oleracea HOM05D006993 ORTHO05D008336 1.5e-41 173.7 183 61.2
Rhsim13G0056200 Rhododendron simsii HOM05D006570 ORTHO05D008193 1.9e-41 173.3 169 59.8
Duzib133G0497 Durio zibethinus HOM05D006993 ORTHO05D008336 4.3e-41 172.2 109 79.8
HanXRQChr08g0230791 Helianthus annuus HOM05D006993 ORTHO05D008336 9.7e-41 171.0 185 54.1
C07p10500 Brassica napus HOM05D006993 ORTHO05D008336 1.3e-40 170.6 200 57.0
CARHR101970 Cardamine hirsuta HOM05D006993 ORTHO05D008336 1.3e-40 170.6 119 71.4
MBI15_g35689_MAGBIO Magnolia biondii HOM05D006993 ORTHO05D008336 1.3e-40 170.6 154 61.0
Gorai.N000700 Gossypium raimondii HOM05D006993 ORTHO05D008336 1.6e-40 170.2 207 54.1
Zm00001eb108910 Zea mays HOM05D006993 ORTHO05D008336 2.8e-40 169.5 149 59.7
arahy.Tifrunner.gnm1.ann1.6DX8AG Arachis hypogaea HOM05D006993 ORTHO05D008336 4.8e-40 168.7 213 51.6
EL10Ac5g10566 Beta vulgaris HOM05D006993 ORTHO05D008336 8.2e-40 167.9 203 53.2
AUR62028621 Chenopodium quinoa HOM05D006993 ORTHO05D008336 3.1e-39 166.0 205 52.7
BcaB06g26751 Brassica carinata HOM05D006993 ORTHO05D008336 9.0e-39 164.5 187 56.7
Ah.11g050660 Amaranthus hybridus HOM05D006993 ORTHO05D008336 1.7e-37 160.2 248 45.2
AUR62008046 Chenopodium quinoa HOM05D006993 ORTHO05D008336 2.2e-37 159.8 203 51.2
Zm00001eb327210 Zea mays HOM05D006993 ORTHO05D008336 3.8e-37 159.1 155 54.8
Ca_23571_v3 Cicer arietinum L. HOM05D006993 ORTHO05D008336 5.0e-37 158.7 165 63.0
SalBow6G6587 Salvia bowleyana HOM05D006993 ORTHO05D008336 5.0e-37 158.7 145 61.4
Carub.0003s2586 Capsella rubella HOM05D006993 ORTHO05D008336 8.5e-37 157.9 106 74.5
SalBow2G2967 Salvia bowleyana HOM05D006993 ORTHO05D008336 3.2e-36 156.0 162 54.9
Sp3g23040 Schrenkiella parvula HOM05D006993 ORTHO05D008336 9.4e-36 154.5 186 54.3
unitig_736.g22974 Utricularia gibba HOM05D006993 ORTHO05D008336 9.4e-36 154.5 144 54.9
Os07g0607800 Oryza sativa ssp. japonica HOM05D006993 ORTHO05D008336 2.7e-35 152.9 106 65.1
Nitab4.5_0005967g0020 Nicotiana tabacum HOM05D006993 ORTHO05D008336 7.9e-35 151.4 205 52.2
TWI36G0749 Tripterygium wilfordii HOM05D006993 ORTHO05D008336 8.8e-34 147.9 136 61.8
Gohir.A07G162350 Gossypium hirsutum HOM05D006993 ORTHO05D008336 1.5e-33 147.1 231 48.1
ClCG05G021810 Citrullus lanatus HOM05D006993 ORTHO05D008336 1.3e-32 144.1 146 54.8
AagrBONN_evm.TU.Sc2ySwM_344.1609 Anthoceros agrestis HOM05D006993 ORTHO05D008336 9.4e-28 127.9 117 54.7
Pp3c2_17900 Physcomitrium patens HOM05D006993 ORTHO05D008336 3.1e-23 112.8 110 52.7
Mapoly0043s0057 Marchantia polymorpha HOM05D006993 ORTHO05D008336 4.1e-23 112.5 118 51.7
SMO111G0038 Selaginella moellendorffii HOM05D006993 ORTHO05D008336 7.0e-23 111.7 101 53.5
CBR_g51823 Chara braunii HOM05D006993 ORTHO05D008336 5.0e-13 79.0 72 54.2
Gohir.D11G152300 Gossypium hirsutum HOM05D006993 ORTHO05D008336 1.5e-12 77.4 131 47.3
Haze_03547 Corylus avellana HOM05D006993 ORTHO05D008336 3.6e-11 72.8 147 46.3
Ca_23582_v3 Cicer arietinum L. HOM05D000001 ORTHO05D000003 9.1e-07 58.2 94 43.6
THA.LOC104815380 Tarenaya hassleriana HOM05D006993 ORTHO05D008336 2.7e-06 56.6 155 36.8


User provided reference genes

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