Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr17g0341431 Lupinus albus HOM05D005042 ORTHO05D006080 0.0e+00 1124.4 615 100.0
Lalb_Chr10g0099121 Lupinus albus HOM05D005042 ORTHO05D006080 4.6e-184 648.7 619 65.6
Glyma.02G122200 Glycine max HOM05D005042 ORTHO05D006080 1.9e-121 440.7 627 47.7
Phvul.003G038600 Phaseolus vulgaris HOM05D005042 ORTHO05D006080 7.2e-121 438.7 632 47.2
arahy.Tifrunner.gnm1.ann1.U4ZHW1 Arachis hypogaea HOM05D005042 ORTHO05D006080 1.2e-107 394.8 636 46.4
Glyma.01G064400 Glycine max HOM05D005042 ORTHO05D006080 1.5e-94 351.3 644 41.0
Lj2g0019338 Lotus japonicus HOM05D005042 ORTHO05D006080 4.6e-83 313.2 484 47.9
Ca_05058_v3 Cicer arietinum L. HOM05D005042 ORTHO05D006080 4.9e-77 293.1 616 38.0
Medtr5g047140 Medicago truncatula HOM05D005042 ORTHO05D006080 2.7e-75 287.3 653 39.5
CiPaw.06G094600 Carya illinoinensis HOM05D005042 ORTHO05D006080 6.0e-75 286.2 671 36.5
arahy.Tifrunner.gnm1.ann1.6TZ00L Arachis hypogaea HOM05D005042 ORTHO05D006080 1.7e-74 284.6 503 41.2
TPR.G38503 Trifolium pratense HOM05D005042 ORTHO05D006080 1.1e-73 282.0 593 40.0
Cfa008851 Carpinus fangiana HOM05D005042 ORTHO05D006080 3.3e-73 280.4 737 35.7
Haze_11871 Corylus avellana HOM05D005042 ORTHO05D006080 7.3e-73 279.3 724 36.0
Psat2g093520 Pisum sativum HOM05D005042 ORTHO05D006080 2.8e-72 277.3 695 36.0
CiPaw.05G122400 Carya illinoinensis HOM05D005042 ORTHO05D006080 4.5e-70 270.0 738 34.1
Dinv34024 Davidia involucrata HOM05D005042 ORTHO05D006080 5.8e-70 269.6 717 34.0
Manes.01G025000 Manihot esculenta HOM05D005042 ORTHO05D006080 6.0e-67 259.6 667 36.1
Potri.008G109100 Populus trichocarpa HOM05D005042 ORTHO05D006080 8.7e-66 255.8 711 35.0
Potri.T155180 Populus trichocarpa HOM05D005042 ORTHO05D006080 8.7e-66 255.8 711 35.0
Rhsim12G0071400 Rhododendron simsii HOM05D005042 ORTHO05D006080 7.4e-65 252.7 624 34.8
Thecc.02G323700 Theobroma cacao HOM05D005042 ORTHO05D006080 9.6e-65 252.3 647 35.7
TPR.G37754 Trifolium pratense HOM05D005042 ORTHO05D006080 5.3e-63 246.5 637 34.9
Duzib251G0840 Durio zibethinus HOM05D005042 ORTHO05D006080 6.9e-63 246.1 642 35.7
Eucgr.G02425 Eucalyptus grandis HOM05D005042 ORTHO05D006080 1.5e-62 245.0 618 35.1
Lj3A1027T86 Lonicera japonica HOM05D005042 ORTHO05D006080 2.0e-62 244.6 689 34.1
Potri.010G139100 Populus trichocarpa HOM05D005042 ORTHO05D006080 2.6e-62 244.2 732 32.9
TAR726G0003 Trochodendron aralioides HOM05D005042 ORTHO05D006080 9.9e-62 242.3 692 34.1
Prupe.1G292900 Prunus persica HOM05D005042 ORTHO05D006080 4.9e-61 240.0 679 34.9
TWI31G0262 Tripterygium wilfordii HOM05D005042 ORTHO05D006080 5.5e-60 236.5 673 34.3
vmacro01299 Vaccinium macrocarpon HOM05D005042 ORTHO05D006080 1.6e-56 224.9 653 33.8
Cc11_g11610 Coffea canephora HOM05D005042 ORTHO05D006080 4.8e-56 223.4 628 35.2
Oeu024162.6 Olea europaea HOM05D005042 ORTHO05D006080 6.9e-55 219.5 651 32.0
CSS0000751 Camellia sinensis var. sinensis HOM05D005042 ORTHO05D006080 1.5e-54 218.4 719 32.3
EL10Ac6g14684 Beta vulgaris HOM05D005042 ORTHO05D006080 5.8e-54 216.5 618 30.6
Cpa.g.sc1.165 Carica papaya HOM05D005042 ORTHO05D006080 1.1e-52 212.2 673 31.9
CANSAT11G1456 Cannabis sativa HOM05D005042 ORTHO05D006080 1.9e-52 211.5 166 71.1
PGR119G2532 Punica granatum HOM05D005042 ORTHO05D006080 6.0e-51 206.5 686 32.1
Nn4g23527 Nelumbo nucifera HOM05D005042 ORTHO05D006080 1.8e-50 204.9 664 33.3
Actinidia07770 Actinidia chinensis HOM05D005042 ORTHO05D006080 5.1e-50 203.4 687 32.8
Sabra08G0082800 Salix brachista HOM05D005042 ORTHO05D006080 8.7e-50 202.6 709 31.2
HanXRQChr17g0570091 Helianthus annuus HOM05D005042 ORTHO05D006080 1.1e-49 202.2 271 50.2
TAR371G1247 Trochodendron aralioides HOM05D005042 ORTHO05D006080 1.1e-49 202.2 161 68.3
Hund25158 Selenicereus undatus HOM05D005042 ORTHO05D006080 1.5e-49 201.8 628 33.0
Rhsim09G0122700 Rhododendron simsii HOM05D005042 ORTHO05D006080 3.3e-49 200.7 773 29.9
Lsat_1_v5_gn_3_106381 Lactuca sativa HOM05D005042 ORTHO05D006080 4.3e-49 200.3 174 65.5
TWI79G1206 Tripterygium wilfordii HOM05D005042 ORTHO05D006080 2.2e-48 198.0 672 32.9
CDE10G0431 Ceratophyllum demersum HOM05D005042 ORTHO05D006080 3.1e-47 194.1 163 65.0
CsaV3_6G033840 Cucumis sativus L. HOM05D005042 ORTHO05D006080 4.1e-47 193.7 163 67.5
MELO3C011406.2 Cucumis melo HOM05D005042 ORTHO05D006080 5.3e-47 193.4 164 67.1
vmacro10479 Vaccinium macrocarpon HOM05D005042 ORTHO05D006080 2.0e-46 191.4 747 30.8
Oeu057419.1 Olea europaea HOM05D005042 ORTHO05D006080 4.5e-46 190.3 652 30.7
GSVIVG01012257001 Vitis vinifera HOM05D005042 ORTHO05D006080 1.0e-45 189.1 623 34.2
Atru.chr11.1578 Acer truncatum HOM05D005042 ORTHO05D006080 1.3e-45 188.7 736 28.5
ATR0827G068 Amborella trichopoda HOM05D005042 ORTHO05D006080 1.3e-45 188.7 163 66.3
SGA_v2.0_scaffold287G47187 Striga asiatica HOM05D005042 ORTHO05D006080 1.3e-45 188.7 649 32.2
ECA246G3902 Erigeron canadensis HOM05D005042 ORTHO05D006080 1.7e-45 188.3 167 65.9
COL.COLO4_27836 Corchorus olitorius HOM05D005042 ORTHO05D006080 5.5e-44 183.3 180 60.0
Migut.E00252 Erythranthe guttata HOM05D005042 ORTHO05D006080 5.5e-44 183.3 605 32.1
MD16G1056300 Malus domestica HOM05D005042 ORTHO05D006080 1.2e-43 182.2 667 31.3
unitig_62.g23700 Utricularia gibba HOM05D005042 ORTHO05D006080 1.6e-43 181.8 172 61.6
VMungo1215G3453 Vigna mungo HOM05D005042 ORTHO05D006080 4.6e-43 180.3 133 75.2
AUR62003064 Chenopodium quinoa HOM05D005042 ORTHO05D006080 1.0e-42 179.1 555 33.2
AUR62007879 Chenopodium quinoa HOM05D005042 ORTHO05D006080 1.4e-42 178.7 539 32.7
PSO478G2238 Papaver somniferum HOM05D005042 ORTHO05D006080 1.4e-42 178.7 161 62.1
ClCG08G010560 Citrullus lanatus HOM05D005042 ORTHO05D006080 1.8e-42 178.3 202 54.0
Oeu055079.1 Olea europaea HOM05D005042 ORTHO05D006080 2.3e-42 177.9 458 35.6
Aa31LG4G11790 Aethionema arabicum HOM05D005042 ORTHO05D006080 3.9e-42 177.2 620 32.4
PSO017G3437 Papaver somniferum HOM05D005042 ORTHO05D006080 1.5e-41 175.3 161 60.9
THA.LOC104821992 Tarenaya hassleriana HOM05D005042 ORTHO05D006080 2.5e-41 174.5 634 30.0
FAN07G1705 Fragaria x ananassa HOM05D005042 ORTHO05D006080 5.7e-41 173.3 655 32.4
Sabra10G0107300 Salix brachista HOM05D005042 ORTHO05D006080 7.4e-41 172.9 686 29.4
Ciclev10030834m.g Citrus clementina HOM05D005042 ORTHO05D006080 9.7e-41 172.6 728 27.9
COL.COLO4_27818 Corchorus olitorius HOM05D005042 ORTHO05D006080 1.7e-40 171.8 646 30.3
Gohir.A05G306900 Gossypium hirsutum HOM05D005042 ORTHO05D006080 4.8e-40 170.2 628 31.1
SEGI_40784 Sequoiadendron giganteum HOM05D005042 ORTHO05D006080 1.4e-39 168.7 204 49.0
FAN22G1919 Fragaria x ananassa HOM05D005042 ORTHO05D006080 1.8e-39 168.3 657 31.5
Solyc05g011950.3 Solanum lycopersicum HOM05D005042 ORTHO05D006080 1.8e-39 168.3 163 60.7
Gorai.009G327100 Gossypium raimondii HOM05D005042 ORTHO05D006080 4.1e-39 167.2 622 30.7
RcHm_v2.0_Chr4g0437421 Rosa chinensis HOM05D005042 ORTHO05D006080 1.5e-38 165.2 677 29.5
Aqoxy3G03731 Aquilegia oxysepala HOM05D005042 ORTHO05D006080 2.0e-38 164.9 163 61.3
Gohir.D05G307200 Gossypium hirsutum HOM05D005042 ORTHO05D006080 4.5e-38 163.7 622 30.5
AT1G69060 Arabidopsis thaliana HOM05D005042 ORTHO05D006080 5.0e-37 160.2 167 58.7
TAR629G0517 Trochodendron aralioides HOM05D005042 ORTHO05D006080 6.5e-37 159.8 717 30.3
MBI16_g07040_MAGBIO Magnolia biondii HOM05D005042 ORTHO05D006080 8.5e-37 159.5 640 30.3
FAN17G2893 Fragaria x ananassa HOM05D005042 ORTHO05D006080 1.4e-36 158.7 650 30.8
FvH4_4g29350 Fragaria vesca HOM05D005042 ORTHO05D006080 7.2e-36 156.4 646 30.7
Nitab4.5_0012072g0010 Nicotiana tabacum HOM05D005042 ORTHO05D006080 1.2e-35 155.6 663 29.9
Peaxi162Scf00188g01341 Petunia axillaris HOM05D005042 ORTHO05D006080 1.0e-34 152.5 179 54.7
arahy.Tifrunner.gnm1.ann1.L0BNS4 Arachis hypogaea HOM05D005042 ORTHO05D006080 1.8e-34 151.8 113 72.6
Pp3c1_680 Physcomitrium patens HOM05D005042 ORTHO05D006080 3.9e-34 150.6 163 54.0
HPP92_000883 Vanilla planifolia HOM05D005042 ORTHO05D006080 3.9e-34 150.6 631 30.9
TPR.G34179 Trifolium pratense HOM05D005042 ORTHO05D006080 5.1e-34 150.2 169 56.2
MD13G1056900 Malus domestica HOM05D005042 ORTHO05D006080 1.1e-33 149.1 658 29.6
Oeu021807.1 Olea europaea HOM05D005042 ORTHO05D006080 1.5e-33 148.7 165 57.6
FAN12G1549 Fragaria x ananassa HOM05D005042 ORTHO05D006080 2.0e-33 148.3 648 29.9
SEGI_37091 Sequoiadendron giganteum HOM05D005042 ORTHO05D006080 2.6e-33 147.9 161 54.0
Solyc05g011930.4 Solanum lycopersicum HOM05D005042 ORTHO05D006080 4.4e-33 147.1 191 51.8
Sopen05g006680 Solanum pennellii HOM05D000061 ORTHO05D000050 4.4e-33 147.1 152 57.9
CAN.G1021.3 Capsicum annuum HOM05D005042 ORTHO05D006080 5.7e-33 146.7 406 36.2
AagrBONN_evm.TU.Sc2ySwM_117.2775 Anthoceros agrestis HOM05D005042 ORTHO05D006080 9.7e-33 146.0 165 50.9
Nitab4.5_0000027g0180 Nicotiana tabacum HOM05D005042 ORTHO05D006080 9.7e-33 146.0 659 29.1
PSO063G2731 Papaver somniferum HOM05D005042 ORTHO05D006080 2.8e-32 144.4 633 28.6
PGSC0003DMG400028304 Solanum tuberosum HOM05D005042 ORTHO05D006080 2.8e-32 144.4 163 55.8
QL05p008217 Quercus lobata HOM05D005042 ORTHO05D006080 4.1e-31 140.6 202 48.0
PSO782G3512 Papaver somniferum HOM05D005042 ORTHO05D006080 7.0e-31 139.8 634 29.7
Sopen05g006670 Solanum pennellii HOM05D005042 ORTHO05D006080 9.1e-31 139.4 412 35.2
CAN.G1021.18 Capsicum annuum HOM05D005042 ORTHO05D006080 3.5e-30 137.5 137 57.7
CAN.G1021.10 Capsicum annuum HOM05D005042 ORTHO05D006080 4.5e-30 137.1 159 55.3
CARHR061940 Cardamine hirsuta HOM05D005042 ORTHO05D006080 2.9e-29 134.4 159 54.1
Lsat_1_v5_gn_4_25561 Lactuca sativa HOM05D005042 ORTHO05D006080 8.5e-29 132.9 155 52.3
ECA234G0547 Erigeron canadensis HOM05D005042 ORTHO05D006080 1.4e-28 132.1 165 51.5
Pp3c2_29040 Physcomitrium patens HOM05D005042 ORTHO05D006080 2.5e-28 131.3 163 50.9
Zm00001eb057530 Zea mays HOM05D005042 ORTHO05D006080 1.2e-27 129.0 161 54.0
HanXRQChr16g0527171 Helianthus annuus HOM05D005042 ORTHO05D006080 1.4e-26 125.6 166 52.4
DCAR_030054 Daucus carota HOM05D005042 ORTHO05D006080 8.8e-26 122.9 207 42.5
CAN.G1021.20 Capsicum annuum HOM05D005042 ORTHO05D006080 2.0e-25 121.7 137 54.0
DCAR_023741 Daucus carota HOM05D005042 ORTHO05D006080 2.0e-25 121.7 102 63.7
Carub.0002s1568 Capsella rubella HOM05D005042 ORTHO05D006080 5.7e-25 120.2 630 28.6
DCAR_007205 Daucus carota HOM05D005042 ORTHO05D006080 2.2e-24 118.2 207 42.5
Ah.03g138660 Amaranthus hybridus HOM05D000485 ORTHO05D000341 2.8e-24 117.9 167 46.7
AL2G28110 Arabidopsis lyrata HOM05D005042 ORTHO05D006080 2.4e-23 114.8 166 47.6
Dinv15584 Davidia involucrata HOM05D000485 ORTHO05D000341 5.3e-23 113.6 567 26.8
Sc04g0007390 Simmondsia chinensis HOM05D005042 ORTHO05D006080 5.3e-23 113.6 616 26.8
CAN.G1021.19 Capsicum annuum HOM05D005042 ORTHO05D006080 2.0e-22 111.7 134 53.7
CAN.G1021.24 Capsicum annuum HOM05D005042 ORTHO05D006080 7.7e-22 109.8 129 53.5
Solyc05g011960.4 Solanum lycopersicum HOM05D005042 ORTHO05D006080 7.7e-22 109.8 84 69.0
Sp5g24160 Schrenkiella parvula HOM05D005042 ORTHO05D006080 1.7e-21 108.6 584 28.1
Sopen05g006700 Solanum pennellii HOM05D005042 ORTHO05D006080 2.2e-21 108.2 84 67.9
Mapoly0211s0012 Marchantia polymorpha HOM05D005042 ORTHO05D006080 2.9e-21 107.8 163 45.4
Nn3g17525 Nelumbo nucifera HOM05D005042 ORTHO05D006080 3.8e-21 107.5 89 68.5
Os03g0752700 Oryza sativa ssp. japonica HOM05D005042 ORTHO05D006080 1.1e-20 105.9 167 45.5
PGSC0003DMG400028305 Solanum tuberosum HOM05D005042 ORTHO05D006080 1.9e-20 105.1 84 67.9
C06p40780 Brassica napus HOM05D005042 ORTHO05D006080 4.2e-20 104.0 164 44.5
BolC6t39355H Brassica oleracea HOM05D005042 ORTHO05D006080 4.2e-20 104.0 164 44.5
Dinv15585 Davidia involucrata HOM05D005042 ORTHO05D006080 1.6e-19 102.1 70 75.7
VMungo0771G0001 Vigna mungo HOM05D005042 ORTHO05D006080 3.6e-19 100.9 194 37.6
CDE10G0071 Ceratophyllum demersum HOM05D005042 ORTHO05D006080 6.1e-19 100.1 180 38.9
BraA07t31136Z Brassica rapa HOM05D005042 ORTHO05D006080 4.0e-18 97.4 164 42.7
CBR_g19648 Chara braunii HOM05D005042 ORTHO05D006080 2.0e-17 95.1 106 50.0
TAR371G1032 Trochodendron aralioides HOM05D005042 ORTHO05D006080 5.7e-17 93.6 299 30.1
VMungo0720G2920 Vigna mungo HOM05D005042 ORTHO05D006080 1.3e-16 92.4 229 34.5
Thhalv10018302m.g Eutrema salsugineum HOM05D005042 ORTHO05D006080 3.7e-16 90.9 599 26.2
A07p35450 Brassica napus HOM05D005042 ORTHO05D006080 3.8e-13 80.9 628 23.9
Sed0017498 Sechium edule HOM05D005042 ORTHO05D006080 2.5e-12 78.2 124 41.1
Manes.14G088800 Manihot esculenta HOM05D005042 ORTHO05D006080 7.2e-12 76.6 70 65.7


User provided reference genes

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