Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr17g0340981 Lupinus albus HOM05D002318 ORTHO05D008744 4.4e-189 664.5 333 100.0
Phvul.002G069400 Phaseolus vulgaris HOM05D002318 ORTHO05D008744 5.6e-152 541.2 329 83.6
Ca_04907_v3 Cicer arietinum L. HOM05D002318 ORTHO05D008744 1.6e-151 539.7 336 80.7
Glyma.02G113500 Glycine max HOM05D002318 ORTHO05D008744 2.4e-150 535.8 326 83.1
Lj2g0021077 Lotus japonicus HOM05D002318 ORTHO05D008744 4.0e-150 535.0 330 82.4
TPR.G22412 Trifolium pratense HOM05D002318 ORTHO05D008744 3.8e-148 528.5 341 80.1
Psat2g128360 Pisum sativum HOM05D002318 ORTHO05D008744 3.2e-147 525.4 338 80.2
VMungo1215G2584 Vigna mungo HOM05D002318 ORTHO05D008744 4.2e-147 525.0 330 80.9
arahy.Tifrunner.gnm1.ann1.T0481B Arachis hypogaea HOM05D002318 ORTHO05D008744 1.8e-142 509.6 332 78.9
arahy.Tifrunner.gnm1.ann1.T5ZGHX Arachis hypogaea HOM05D002318 ORTHO05D008744 1.5e-141 506.5 326 79.4
Haze_11934 Corylus avellana HOM05D002318 ORTHO05D008744 2.2e-132 476.1 334 71.6
Cfa008908 Carpinus fangiana HOM05D002318 ORTHO05D008744 2.5e-131 472.6 334 70.7
QL03p070830 Quercus lobata HOM05D002318 ORTHO05D008744 2.7e-130 469.2 331 71.9
RcHm_v2.0_Chr4g0438871 Rosa chinensis HOM05D002318 ORTHO05D008744 3.5e-130 468.8 334 70.7
Medtr5g043480 Medicago truncatula HOM05D002318 ORTHO05D008744 3.9e-129 465.3 341 71.8
CiPaw.05G128000 Carya illinoinensis HOM05D002318 ORTHO05D008744 4.3e-128 461.8 331 72.2
TAR622G0636 Trochodendron aralioides HOM05D002318 ORTHO05D004713 4.3e-128 461.8 333 70.3
FAN07G2980 Fragaria x ananassa HOM05D002318 ORTHO05D004713 1.6e-127 459.9 334 71.3
FAN22G0051 Fragaria x ananassa HOM05D002318 ORTHO05D008744 6.9e-126 454.5 334 71.0
MD16G1064900 Malus domestica HOM05D002318 ORTHO05D008744 4.5e-125 451.8 335 68.1
FAN17G2010 Fragaria x ananassa HOM05D002318 ORTHO05D008744 2.2e-124 449.5 345 68.7
PGR119G0925 Punica granatum HOM05D002318 ORTHO05D008744 5.5e-123 444.9 337 67.1
Thecc.02G336500 Theobroma cacao HOM05D002318 ORTHO05D008744 7.1e-123 444.5 332 67.8
Cpa.g.sc1.87 Carica papaya HOM05D002318 ORTHO05D008744 1.2e-122 443.7 326 69.3
Potri.010G161600 Populus trichocarpa HOM05D002318 ORTHO05D008744 2.7e-122 442.6 342 67.0
CsaV3_6G032440 Cucumis sativus L. HOM05D002318 ORTHO05D008744 1.0e-121 440.7 331 66.8
GSVIVG01012177001 Vitis vinifera HOM05D002318 ORTHO05D008744 1.0e-121 440.7 335 67.2
Atru.chr11.1690 Acer truncatum HOM05D002318 ORTHO05D008744 2.3e-121 439.5 330 68.5
COL.COLO4_27936 Corchorus olitorius HOM05D002318 ORTHO05D008744 2.3e-121 439.5 340 68.2
TWI75G0802 Tripterygium wilfordii HOM05D002318 ORTHO05D008744 2.3e-121 439.5 332 68.7
Sc11g0002270 Simmondsia chinensis HOM05D002318 ORTHO05D008744 3.0e-121 439.1 333 66.1
Sabra10G0122900 Salix brachista HOM05D002318 ORTHO05D008744 5.1e-121 438.3 340 65.9
Aqoxy3G03551 Aquilegia oxysepala HOM05D002318 ORTHO05D008744 6.7e-121 438.0 335 69.0
Ciclev10032054m.g Citrus clementina HOM05D002318 ORTHO05D008744 1.9e-120 436.4 332 70.2
MELO3C011434.2 Cucumis melo HOM05D002318 ORTHO05D008744 2.5e-120 436.0 329 66.9
THA.LOC104805183 Tarenaya hassleriana HOM05D002318 ORTHO05D008744 7.4e-120 434.5 340 67.4
FAN12G0082 Fragaria x ananassa HOM05D002318 ORTHO05D008744 9.7e-120 434.1 333 68.5
Duzib268G0798 Durio zibethinus HOM05D002318 ORTHO05D008744 3.7e-119 432.2 274 75.9
Eucgr.G02464 Eucalyptus grandis HOM05D002318 ORTHO05D008744 8.2e-119 431.0 270 78.1
Gorai.013G091200 Gossypium raimondii HOM05D002318 ORTHO05D008744 6.9e-118 427.9 333 65.5
CARHR145730 Cardamine hirsuta HOM05D002318 ORTHO05D008744 3.4e-117 425.6 332 66.3
Gohir.A13G079900 Gossypium hirsutum HOM05D002318 ORTHO05D008744 7.7e-117 424.5 333 65.2
AUR62043182 Chenopodium quinoa HOM05D002318 ORTHO05D008744 5.0e-116 421.8 333 64.0
Thhalv10004578m.g Eutrema salsugineum HOM05D002318 ORTHO05D008744 4.2e-115 418.7 339 64.3
Lsat_1_v5_gn_8_48101 Lactuca sativa HOM05D002318 ORTHO05D004713 7.2e-115 417.9 303 68.6
Nitab4.5_0000334g0260 Nicotiana tabacum HOM05D002318 ORTHO05D008744 7.2e-115 417.9 334 63.2
MBI16_g06774_MAGBIO Magnolia biondii HOM05D002318 ORTHO05D008744 9.4e-115 417.5 326 66.0
AT2G03390 Arabidopsis thaliana HOM05D002318 ORTHO05D008744 2.1e-114 416.4 340 63.2
CANSAT54G0184 Cannabis sativa HOM05D002318 ORTHO05D008744 2.1e-114 416.4 264 76.9
Aa31LG2G7170 Aethionema arabicum HOM05D002318 ORTHO05D008744 4.6e-114 415.2 346 65.0
HanXRQChr12g0362851 Helianthus annuus HOM05D002318 ORTHO05D008744 7.9e-114 414.5 290 70.3
Sopen05g007450 Solanum pennellii HOM05D002318 ORTHO05D008744 7.9e-114 414.5 335 62.7
Sp2g14310 Schrenkiella parvula HOM05D002318 ORTHO05D008744 1.0e-113 414.1 333 65.8
AL5G13100 Arabidopsis lyrata HOM05D002318 ORTHO05D008744 1.8e-113 413.3 341 62.5
AL5G13140 Arabidopsis lyrata HOM05D002318 ORTHO05D008744 1.8e-113 413.3 341 62.5
BcaC06g34000 Brassica carinata HOM05D002318 ORTHO05D008744 1.8e-113 413.3 336 64.6
ATR0111G011 Amborella trichopoda HOM05D002318 ORTHO05D008744 6.7e-113 411.4 294 71.4
Carub.0005s0236 Capsella rubella HOM05D002318 ORTHO05D008744 6.7e-113 411.4 341 63.6
PGSC0003DMG401028329 Solanum tuberosum HOM05D002318 ORTHO05D008744 6.7e-113 411.4 335 62.1
PGSC0003DMG402022110 Solanum tuberosum HOM05D002318 ORTHO05D008744 6.7e-113 411.4 335 62.1
CSS0013540 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 8.8e-113 411.0 336 64.3
ClCG08G010240 Citrullus lanatus HOM05D002318 ORTHO05D008744 8.8e-113 411.0 366 59.8
Cc11_g12380 Coffea canephora HOM05D002318 ORTHO05D008744 4.3e-112 408.7 333 62.5
Actinidia19922 Actinidia chinensis HOM05D002318 ORTHO05D008744 2.2e-111 406.4 338 62.4
C07p33850 Brassica napus HOM05D002318 ORTHO05D008744 3.7e-111 405.6 338 64.5
Solyc05g012620.4 Solanum lycopersicum HOM05D002318 ORTHO05D008744 3.7e-111 405.6 273 70.3
Ah.13g073950 Amaranthus hybridus HOM05D002318 ORTHO05D008744 6.3e-111 404.8 329 62.0
BcaC06g31184 Brassica carinata HOM05D002318 ORTHO05D008744 1.1e-110 404.1 341 62.8
BolC7t43899H Brassica oleracea HOM05D002318 ORTHO05D008744 1.1e-110 404.1 338 64.2
BraA06t27203Z Brassica rapa HOM05D002318 ORTHO05D008744 2.4e-110 402.9 341 63.9
CAN.G1340.13 Capsicum annuum HOM05D002318 ORTHO05D008744 9.1e-110 401.0 332 61.1
Hund05860 Selenicereus undatus HOM05D002318 ORTHO05D008744 4.5e-109 398.7 273 70.3
Oeu021096.1 Olea europaea HOM05D002318 ORTHO05D008744 2.2e-108 396.4 350 60.9
vmacro01330 Vaccinium macrocarpon HOM05D002318 ORTHO05D008744 3.2e-107 392.5 365 58.4
EL10As3g23350 Beta vulgaris HOM05D002318 ORTHO05D008744 5.5e-107 391.7 372 56.7
DCAR_027449 Daucus carota HOM05D002318 ORTHO05D008744 9.4e-107 391.0 345 59.7
Peaxi162Scf00314g00023 Petunia axillaris HOM05D002318 ORTHO05D008744 9.4e-107 391.0 374 56.4
Prupe.1G282000 Prunus persica HOM05D002318 ORTHO05D008744 1.2e-106 390.6 329 62.3
Gohir.D13G079700 Gossypium hirsutum HOM05D002318 ORTHO05D008744 2.3e-105 386.3 333 60.7
Migut.L01223 Erythranthe guttata HOM05D002318 ORTHO05D008744 5.1e-105 385.2 342 59.6
Rhsim12G0076700 Rhododendron simsii HOM05D002318 ORTHO05D008744 1.1e-104 384.0 346 59.5
ECA233G4874 Erigeron canadensis HOM05D002318 ORTHO05D008744 1.7e-103 380.2 250 74.0
AUR62038089 Chenopodium quinoa HOM05D002318 ORTHO05D008744 1.3e-100 370.5 333 58.3
Hma1.2p1_0354F.1_g133650 Hydrangea macrophylla HOM05D002318 ORTHO05D008744 6.5e-100 368.2 287 64.8
CDE04G0061 Ceratophyllum demersum HOM05D002318 ORTHO05D008744 4.7e-98 362.1 291 62.5
Manes.01G030400 Manihot esculenta HOM05D002318 ORTHO05D008744 3.0e-97 359.4 288 67.0
SalBow2G2755 Salvia bowleyana HOM05D002318 ORTHO05D008744 5.2e-97 358.6 277 63.5
SEGI_16280 Sequoiadendron giganteum HOM05D002318 ORTHO05D008744 4.4e-96 355.5 272 62.9
Os08g0172200 Oryza sativa ssp. japonica HOM05D002318 ORTHO05D008744 1.3e-95 354.0 320 57.8
FvH4_4g30500 Fragaria vesca HOM05D002318 ORTHO05D008744 2.8e-95 352.8 274 68.6
Nn3g17371 Nelumbo nucifera HOM05D002318 ORTHO05D008744 8.2e-95 351.3 288 63.9
Dinv34114 Davidia involucrata HOM05D002318 ORTHO05D008744 4.1e-94 349.0 274 65.7
unitig_22.g6902 Utricularia gibba HOM05D002318 ORTHO05D008744 6.5e-92 341.7 324 56.8
A06p43150 Brassica napus HOM05D002318 ORTHO05D008744 2.2e-87 326.6 299 61.9
Sed0004708 Sechium edule HOM05D002318 ORTHO05D008744 4.1e-86 322.4 274 62.0
Lj6C782T15 Lonicera japonica HOM05D002318 ORTHO05D008744 9.1e-86 321.2 331 54.1
Mapoly0001s0530 Marchantia polymorpha HOM05D002318 ORTHO05D008744 2.7e-85 319.7 247 62.3
arahy.Tifrunner.gnm1.ann1.TF58FW Arachis hypogaea HOM05D002318 ORTHO05D008744 2.9e-84 316.2 223 76.7
SGA_v2.0_scaffold16G07752 Striga asiatica HOM05D002318 ORTHO05D008744 6.5e-84 315.1 274 58.8
arahy.Tifrunner.gnm1.ann1.1U2S5X Arachis hypogaea HOM05D002318 ORTHO05D008744 1.9e-83 313.5 223 76.2
Pp3c7_3960 Physcomitrium patens HOM05D002318 ORTHO05D008744 6.8e-81 305.1 250 58.4
AagrBONN_evm.TU.Sc2ySwM_117.1985 Anthoceros agrestis HOM05D002318 ORTHO05D008744 1.7e-76 290.4 272 53.3
Glyma.01G055000 Glycine max HOM05D002318 ORTHO05D008744 1.5e-75 287.3 194 79.9
Dinv16705 Davidia involucrata HOM05D002318 ORTHO05D004713 7.2e-75 285.0 222 68.9
PSO591G0040 Papaver somniferum HOM05D002318 ORTHO05D008744 7.5e-72 275.0 226 63.7
Actinidia31948 Actinidia chinensis HOM05D002318 ORTHO05D008744 2.8e-71 273.1 271 54.2
CBR_g27967 Chara braunii HOM05D002318 ORTHO05D008744 3.4e-64 249.6 257 50.6
FAN16G1553 Fragaria x ananassa HOM05D002318 ORTHO05D008744 4.4e-64 249.2 158 79.7
SMO115G0105 Selaginella moellendorffii HOM05D002318 ORTHO05D008744 9.8e-64 248.1 212 58.5
CSS0007300 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 3.3e-59 233.0 221 57.9
CSS0032009 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 2.8e-50 203.4 238 50.0
Zm00001eb370310 Zea mays HOM05D002318 ORTHO05D008744 1.2e-45 188.0 151 64.2
Aa31sc734G30 Aethionema arabicum HOM05D002318 ORTHO05D008744 1.6e-42 177.6 197 55.3
PRCOL_00000845 Prasinoderma coloniale HOM05D002318 ORTHO05D008744 1.4e-38 164.5 257 37.7
Cre02.g113700 Chlamydomonas reinhardtii HOM05D002318 ORTHO05D008744 9.3e-38 161.8 274 37.2
Glyma.01G054950 Glycine max HOM05D002318 ORTHO05D008744 8.1e-26 122.1 89 69.7
CBR_g50304 Chara braunii HOM05D020303 ORTHO05D021299 1.5e-19 101.3 157 36.9
Os01g0764500 Oryza sativa ssp. japonica HOM05D002318 ORTHO05D008744 1.9e-14 84.3 62 61.3
arahy.Tifrunner.gnm1.ann1.QV9UMR Arachis hypogaea HOM05D000001 ORTHO05D000003 1.5e-11 74.7 45 77.8
Lsat_1_v5_gn_5_151580 Lactuca sativa HOM05D002318 ORTHO05D008744 1.9e-11 74.3 56 69.6
Cfa025736 Carpinus fangiana HOM05D020303 ORTHO05D021299 5.5e-06 56.2 70 40.0


User provided reference genes

Program Settings