Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr17g0340601 Lupinus albus HOM05D004641 ORTHO05D005871 2.5e-133 478.8 247 100.0
Lalb_Chr10g0098211 Lupinus albus HOM05D004641 ORTHO05D005871 1.5e-122 443.0 245 93.1
Ca_24263_v3 Cicer arietinum L. HOM05D004641 ORTHO05D005871 2.3e-110 402.5 245 84.1
VMungo1215G3365 Vigna mungo HOM05D004641 ORTHO05D005871 5.1e-110 401.4 245 84.1
Glyma.02G106600 Glycine max HOM05D004641 ORTHO05D005871 1.5e-109 399.8 245 84.1
Phvul.002G086150 Phaseolus vulgaris HOM05D004641 ORTHO05D005871 4.4e-109 398.3 245 82.4
Medtr7g039370 Medicago truncatula HOM05D004641 ORTHO05D005871 1.3e-108 396.7 245 83.3
Medtr5g040250 Medicago truncatula HOM05D004641 ORTHO05D005871 1.7e-108 396.4 245 83.3
Psat2g121160 Pisum sativum HOM05D004641 ORTHO05D005871 9.1e-107 390.6 245 80.8
Glyma.01G046400 Glycine max HOM05D004641 ORTHO05D005871 2.6e-106 389.0 245 81.2
Lj2g0007835 Lotus japonicus HOM05D004641 ORTHO05D005871 1.1e-104 383.6 245 80.0
CSS0000565 Camellia sinensis var. sinensis HOM05D004641 ORTHO05D005871 2.4e-99 365.9 245 75.1
CSS0029182 Camellia sinensis var. sinensis HOM05D004641 ORTHO05D005871 4.1e-99 365.2 245 74.7
Lj3A1038G72 Lonicera japonica HOM05D004641 ORTHO05D005871 9.1e-99 364.0 245 74.3
Cpa.g.sc128.14 Carica papaya HOM05D004641 ORTHO05D005871 1.6e-98 363.2 246 73.2
CANSAT64G1560 Cannabis sativa HOM05D004641 ORTHO05D005871 5.9e-98 361.3 247 76.9
CiPaw.06G083900 Carya illinoinensis HOM05D004641 ORTHO05D005871 7.7e-98 360.9 244 75.8
CiPaw.05G136500 Carya illinoinensis HOM05D004641 ORTHO05D005871 1.7e-97 359.8 245 75.1
Gorai.013G084700 Gossypium raimondii HOM05D004641 ORTHO05D005871 2.2e-97 359.4 246 74.0
Gohir.A13G074000 Gossypium hirsutum HOM05D004641 ORTHO05D005871 6.5e-97 357.8 246 73.6
Prupe.1G273100 Prunus persica HOM05D004641 ORTHO05D005871 8.5e-97 357.5 245 75.1
GSVIVG01020002001 Vitis vinifera HOM05D004641 ORTHO05D005871 2.5e-96 355.9 246 73.6
arahy.Tifrunner.gnm1.ann1.K7EFN7 Arachis hypogaea HOM05D004641 ORTHO05D005871 4.2e-96 355.1 251 74.9
Psat0s2466g0040 Pisum sativum HOM05D004641 ORTHO05D005871 4.2e-96 355.1 243 75.3
Actinidia04038 Actinidia chinensis HOM05D004641 ORTHO05D005871 7.2e-96 354.4 247 73.7
Gohir.D13G074100 Gossypium hirsutum HOM05D004641 ORTHO05D005871 7.2e-96 354.4 246 73.2
Duzib268G0036 Durio zibethinus HOM05D004641 ORTHO05D005871 1.2e-95 353.6 246 72.0
PGR102G3009 Punica granatum HOM05D004641 ORTHO05D005871 3.6e-95 352.1 245 73.9
MD13G1073100 Malus domestica HOM05D004641 ORTHO05D005871 4.7e-95 351.7 245 74.7
Eucgr.B03435 Eucalyptus grandis HOM05D004641 ORTHO05D005871 8.0e-95 350.9 245 73.1
Cc11_g13100 Coffea canephora HOM05D004641 ORTHO05D005871 1.0e-94 350.5 245 71.4
QL03p064370 Quercus lobata HOM05D004641 ORTHO05D005871 3.0e-94 349.0 245 74.7
FvH4_4g31460 Fragaria vesca HOM05D004641 ORTHO05D005871 4.0e-94 348.6 246 74.4
FAN22G2174 Fragaria x ananassa HOM05D004641 ORTHO05D005871 4.0e-94 348.6 246 74.8
THA.LOC104822117 Tarenaya hassleriana HOM05D004641 ORTHO05D005871 4.0e-94 348.6 246 69.9
RcHm_v2.0_Chr4g0439951 Rosa chinensis HOM05D004641 ORTHO05D005871 6.8e-94 347.8 245 74.7
COL.COLO4_22996 Corchorus olitorius HOM05D004641 ORTHO05D005871 2.6e-93 345.9 246 71.1
Manes.01G186500 Manihot esculenta HOM05D004641 ORTHO05D005871 2.6e-93 345.9 229 74.7
TWI12G0809 Tripterygium wilfordii HOM05D004641 ORTHO05D005871 3.4e-93 345.5 245 71.0
vmacro04307 Vaccinium macrocarpon HOM05D004641 ORTHO05D005871 3.4e-93 345.5 230 75.2
MSTRG.7808 Avicennia marina HOM05D004641 ORTHO05D005871 5.7e-93 344.7 245 69.4
Peaxi162Scf00541g00527 Petunia axillaris HOM05D004641 ORTHO05D005871 7.5e-93 344.4 245 71.8
Potri.011G083700 Populus trichocarpa HOM05D004641 ORTHO05D005871 9.8e-93 344.0 245 71.4
Ciclev10032310m.g Citrus clementina HOM05D004641 ORTHO05D005871 1.7e-92 343.2 245 70.6
TAR629G2466 Trochodendron aralioides HOM05D004641 ORTHO05D005871 3.7e-92 342.0 252 69.8
Oeu001572.1 Olea europaea HOM05D004641 ORTHO05D005871 4.8e-92 341.7 244 68.4
AUR62005767 Chenopodium quinoa HOM05D004641 ORTHO05D005871 8.3e-92 340.9 245 70.2
Rhsim07G0243500 Rhododendron simsii HOM05D004641 ORTHO05D005871 1.4e-91 340.1 229 74.7
ECA233G1872 Erigeron canadensis HOM05D004641 ORTHO05D005871 1.8e-91 339.7 245 69.8
HanXRQChr12g0362561 Helianthus annuus HOM05D004641 ORTHO05D005871 1.8e-91 339.7 245 69.0
arahy.Tifrunner.gnm1.ann1.ITG5Q4 Arachis hypogaea HOM05D004641 ORTHO05D005871 2.4e-91 339.3 252 71.8
AUR62028790 Chenopodium quinoa HOM05D004641 ORTHO05D005871 3.1e-91 339.0 245 69.4
FAN17G1817 Fragaria x ananassa HOM05D004641 ORTHO05D005871 9.1e-91 337.4 256 70.7
Nn3g17219 Nelumbo nucifera HOM05D004641 ORTHO05D005871 9.1e-91 337.4 253 68.0
TAR622G0412 Trochodendron aralioides HOM05D004641 ORTHO05D005871 9.1e-91 337.4 251 68.5
Nitab4.5_0000703g0120 Nicotiana tabacum HOM05D004641 ORTHO05D005871 1.2e-90 337.0 245 70.6
FAN12G2116 Fragaria x ananassa HOM05D001668 ORTHO05D005871 2.0e-90 336.3 256 70.7
FAN07G1510 Fragaria x ananassa HOM05D004641 ORTHO05D005871 3.5e-90 335.5 256 70.7
SalBow2G2171 Salvia bowleyana HOM05D004641 ORTHO05D005871 4.5e-90 335.1 245 68.2
Hund25250 Selenicereus undatus HOM05D004641 ORTHO05D005871 2.2e-89 332.8 245 69.0
Sopen05g003330 Solanum pennellii HOM05D004641 ORTHO05D005871 2.9e-89 332.4 245 68.2
Thecc.02G351000 Theobroma cacao HOM05D004641 ORTHO05D005871 2.9e-89 332.4 230 72.2
CARHR025060 Cardamine hirsuta HOM05D004641 ORTHO05D005871 3.8e-89 332.0 246 68.7
Aa31LG7G8260 Aethionema arabicum HOM05D004641 ORTHO05D005871 6.5e-89 331.3 246 68.3
Migut.L01304 Erythranthe guttata HOM05D004641 ORTHO05D005871 6.5e-89 331.3 246 67.1
PGSC0003DMG400003384 Solanum tuberosum HOM05D004641 ORTHO05D005871 8.5e-89 330.9 245 68.2
BcaC05g26381 Brassica carinata HOM05D004641 ORTHO05D005871 1.5e-88 330.1 246 69.1
C05p24110 Brassica napus HOM05D004641 ORTHO05D005871 1.5e-88 330.1 246 69.1
BolC5t31146H Brassica oleracea HOM05D004641 ORTHO05D005871 1.5e-88 330.1 246 69.1
Sc11g0001860 Simmondsia chinensis HOM05D004641 ORTHO05D005871 1.9e-88 329.7 245 69.4
DCAR_007149 Daucus carota HOM05D004641 ORTHO05D005871 2.5e-88 329.3 247 69.2
HanXRQChr08g0210501 Helianthus annuus HOM05D004641 ORTHO05D005871 2.5e-88 329.3 245 69.4
Solyc05g007450.3 Solanum lycopersicum HOM05D004641 ORTHO05D005871 2.5e-88 329.3 245 67.3
A09p40260 Brassica napus HOM05D004641 ORTHO05D005871 3.2e-88 328.9 246 68.7
ClCG11G009310 Citrullus lanatus HOM05D004641 ORTHO05D005871 4.2e-88 328.6 244 68.9
AL1G38720 Arabidopsis lyrata HOM05D004641 ORTHO05D005871 5.5e-88 328.2 246 67.9
PSO478G0089 Papaver somniferum HOM05D004641 ORTHO05D005871 5.5e-88 328.2 253 66.4
BraA09t39524Z Brassica rapa HOM05D004641 ORTHO05D005871 9.4e-88 327.4 246 68.7
PSO017G4882 Papaver somniferum HOM05D004641 ORTHO05D005871 1.2e-87 327.0 253 66.4
AT1G26840 Arabidopsis thaliana HOM05D004641 ORTHO05D005871 1.6e-87 326.6 246 67.5
Carub.0001s2410 Capsella rubella HOM05D004641 ORTHO05D005871 1.6e-87 326.6 246 68.3
EL10Ac6g13193 Beta vulgaris HOM05D004641 ORTHO05D005871 3.6e-87 325.5 280 62.1
MBI05_g35443_MAGBIO Magnolia biondii HOM05D004641 ORTHO05D005871 3.6e-87 325.5 258 66.3
BcaC07g39267 Brassica carinata HOM05D004641 ORTHO05D005871 6.1e-87 324.7 246 67.9
C08p22760 Brassica napus HOM05D004641 ORTHO05D005871 6.1e-87 324.7 246 67.9
BolC8t49912H Brassica oleracea HOM05D004641 ORTHO05D005871 6.1e-87 324.7 246 67.9
Sabra11G0066400 Salix brachista HOM05D004641 ORTHO05D005871 1.0e-86 323.9 245 69.0
MELO3C008530.2 Cucumis melo HOM05D004641 ORTHO05D005871 1.4e-86 323.6 244 68.0
Atru.chr11.1801 Acer truncatum HOM05D004641 ORTHO05D005871 3.0e-86 322.4 216 73.6
A08p27580 Brassica napus HOM05D004641 ORTHO05D005871 3.0e-86 322.4 246 67.5
BraA08t34696Z Brassica rapa HOM05D004641 ORTHO05D005871 3.0e-86 322.4 246 67.5
BcaB03g12011 Brassica carinata HOM05D004641 ORTHO05D005871 4.0e-86 322.0 246 67.5
Sp1g21940 Schrenkiella parvula HOM05D004641 ORTHO05D005871 4.0e-86 322.0 246 66.3
CsaV3_2G010800 Cucumis sativus L. HOM05D004641 ORTHO05D005871 6.8e-86 321.2 244 66.8
Thhalv10008398m.g Eutrema salsugineum HOM05D004641 ORTHO05D005871 6.8e-86 321.2 246 66.3
Aqoxy3G03361 Aquilegia oxysepala HOM05D004641 ORTHO05D005871 8.8e-86 320.9 252 65.5
Zm00001eb328260 Zea mays HOM05D004641 ORTHO05D005871 5.7e-85 318.2 255 63.5
Aqoxy5G03781 Aquilegia oxysepala HOM05D004641 ORTHO05D005871 7.5e-85 317.8 247 65.6
Os07g0628600 Oryza sativa ssp. japonica HOM05D004641 ORTHO05D005871 2.8e-84 315.8 253 63.6
CAN.G58.35 Capsicum annuum HOM05D004641 ORTHO05D005871 3.7e-84 315.5 221 70.1
SGA_v2.0_scaffold302G47825 Striga asiatica HOM05D004641 ORTHO05D005871 3.7e-84 315.5 245 66.9
Haze_12020 Corylus avellana HOM05D004641 ORTHO05D005871 6.3e-84 314.7 245 69.8
Sp5g24800 Schrenkiella parvula HOM05D004641 ORTHO05D005871 2.0e-82 309.7 246 65.4
Sed0002473 Sechium edule HOM05D004641 ORTHO05D005871 2.7e-82 309.3 239 66.5
HPP92_016908 Vanilla planifolia HOM05D004641 ORTHO05D005871 2.7e-82 309.3 252 62.7
Ah.03g135170 Amaranthus hybridus HOM05D004641 ORTHO05D005871 1.7e-81 306.6 245 66.1
ATR0800G170 Amborella trichopoda HOM05D004641 ORTHO05D005871 3.8e-81 305.4 229 66.8
Nitab4.5_0012364g0020 Nicotiana tabacum HOM05D004641 ORTHO05D005871 2.5e-80 302.8 245 64.5
SGA_v2.0_scaffold53G19380 Striga asiatica HOM05D004641 ORTHO05D005871 2.5e-80 302.8 245 64.1
MD16G1074100 Malus domestica HOM05D004641 ORTHO05D005871 7.2e-80 301.2 261 63.2
Sed0021592 Sechium edule HOM05D004641 ORTHO05D005871 1.8e-78 296.6 244 64.3
CARHR062650 Cardamine hirsuta HOM05D004641 ORTHO05D005871 8.9e-78 294.3 245 62.0
Oeu054890.1 Olea europaea HOM05D004641 ORTHO05D005871 7.0e-75 284.6 231 61.5
Oeu054889.1 Olea europaea HOM05D004641 ORTHO05D005871 7.8e-74 281.2 231 61.0
CDE04G3358 Ceratophyllum demersum HOM05D004641 ORTHO05D005871 1.0e-73 280.8 254 58.3
SEGI_09090 Sequoiadendron giganteum HOM05D004641 ORTHO05D005871 1.2e-71 273.9 230 58.7
SHI55061 Sapria himalayana HOM05D004641 ORTHO05D005871 4.7e-71 271.9 236 55.9
Lsat_1_v5_gn_8_52860 Lactuca sativa HOM05D004641 ORTHO05D005871 1.0e-70 270.8 245 60.0
Dinv16637 Davidia involucrata HOM05D004641 ORTHO05D005871 3.1e-70 269.2 174 77.6
AagrBONN_evm.TU.Sc2ySwM_228.4149 Anthoceros agrestis HOM05D004641 ORTHO05D005871 1.1e-67 260.8 229 55.0
Mapoly0064s0110 Marchantia polymorpha HOM05D004641 ORTHO05D005871 2.3e-62 243.0 230 54.3
Pp3c13_2030 Physcomitrium patens HOM05D004641 ORTHO05D005871 3.7e-60 235.7 229 52.0
Gohir.A01G134350 Gossypium hirsutum HOM05D004641 ORTHO05D005871 3.3e-56 222.6 156 67.9
MBI09_g01021_MAGBIO Magnolia biondii HOM05D004641 ORTHO05D005871 8.1e-55 218.0 210 57.6
Gohir.A07G052500 Gossypium hirsutum HOM05D004641 ORTHO05D005871 5.8e-53 211.8 139 72.7
unitig_22.g6910 Utricularia gibba HOM05D004641 ORTHO05D005871 1.0e-49 201.1 249 47.8
SMO114G0050 Selaginella moellendorffii HOM05D004641 ORTHO05D005871 1.3e-49 200.7 197 47.7
SMO117G0352 Selaginella moellendorffii HOM05D004641 ORTHO05D005871 5.1e-49 198.7 197 47.7
SMO254G0007 Selaginella moellendorffii HOM05D004641 ORTHO05D005871 1.5e-48 197.2 197 46.7
SMO254G0005 Selaginella moellendorffii HOM05D004641 ORTHO05D005871 3.3e-48 196.1 197 46.7
MBI02_g14195_MAGBIO Magnolia biondii HOM05D004641 ORTHO05D005871 1.8e-46 190.3 211 52.1
Gohir.A08G223448 Gossypium hirsutum HOM05D004641 ORTHO05D005871 8.9e-46 188.0 124 75.0
MBI05_g01300_MAGBIO Magnolia biondii HOM05D004641 ORTHO05D005871 4.4e-45 185.7 224 49.1
CDE08G0800 Ceratophyllum demersum HOM05D004641 ORTHO05D005871 4.9e-44 182.2 223 48.4
SMO254G0008 Selaginella moellendorffii HOM05D004641 ORTHO05D005871 8.1e-39 164.9 197 42.1
MBI10_g44256_MAGBIO Magnolia biondii HOM05D004641 ORTHO05D005871 1.8e-38 163.7 162 54.9
CBR_g31088 Chara braunii HOM05D000019 ORTHO05D000048 1.2e-34 151.0 153 51.0
TPR.G37129 Trifolium pratense HOM05D004641 ORTHO05D005871 2.6e-29 133.3 76 86.8
MD16G1073900 Malus domestica HOM05D004641 ORTHO05D005871 2.4e-27 126.7 83 77.1
Thecc.03G087000 Theobroma cacao HOM05D004641 ORTHO05D005871 7.1e-27 125.2 119 57.1
PRCOL_00006308 Prasinoderma coloniale HOM05D004641 ORTHO05D005871 5.1e-25 119.0 217 33.6
C05p19510 Brassica napus HOM05D004641 ORTHO05D005871 1.1e-24 117.9 96 63.5
BolC5t30653H Brassica oleracea HOM05D004641 ORTHO05D005871 1.1e-24 117.9 96 63.5
SMO254G0011 Selaginella moellendorffii HOM05D004641 ORTHO05D005871 3.3e-24 116.3 200 33.5
MBI10_g06043_MAGBIO Magnolia biondii HOM05D004641 ORTHO05D005871 3.7e-23 112.8 206 38.8
Cre06.g285650 Chlamydomonas reinhardtii HOM05D004641 ORTHO05D005871 4.8e-23 112.5 193 37.8
MBI10_g47167_MAGBIO Magnolia biondii HOM05D004641 ORTHO05D005871 3.4e-21 106.3 183 41.5
SMO254G0019 Selaginella moellendorffii HOM05D004641 ORTHO05D005871 4.5e-21 105.9 217 29.5
MBI13_g45115_MAGBIO Magnolia biondii HOM05D001399 ORTHO05D012970 6.0e-18 95.5 59 79.7
MBI14_g27757_MAGBIO Magnolia biondii HOM05D001399 ORTHO05D012970 3.0e-17 93.2 58 77.6
MBI18_g33078_MAGBIO Magnolia biondii HOM05D001399 ORTHO05D012970 8.7e-17 91.7 57 77.2
MBI11_g16036_MAGBIO Magnolia biondii HOM05D001399 ORTHO05D012970 2.5e-16 90.1 58 75.9
MBI16_g45579_MAGBIO Magnolia biondii HOM05D001399 ORTHO05D012970 2.4e-14 83.6 68 66.2
MBI13_g16082_MAGBIO Magnolia biondii HOM05D001399 ORTHO05D012970 5.9e-13 79.0 54 72.2
CBR_g31090 Chara braunii HOM05D004641 ORTHO05D005871 4.2e-11 72.8 91 41.8
A10p02040 Brassica napus HOM05D000207 ORTHO05D013918 1.2e-10 71.2 51 62.7
A02p16560 Brassica napus HOM05D004641 ORTHO05D005871 4.8e-07 59.3 89 40.4
A09p47150 Brassica napus HOM05D004641 ORTHO05D022007 4.1e-06 56.2 61 45.9
BraA09t40177Z Brassica rapa HOM05D004641 ORTHO05D022007 4.1e-06 56.2 61 45.9


User provided reference genes

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