Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr17g0340041 Lupinus albus HOM05D004815 ORTHO05D005742 6.3e-213 743.8 368 100.0
Lalb_Chr10g0097591 Lupinus albus HOM05D004815 ORTHO05D005742 2.9e-181 638.6 368 85.1
Glyma.03G018700 Glycine max HOM05D004815 ORTHO05D005742 2.1e-168 595.9 368 80.7
Medtr8g033040 Medicago truncatula HOM05D004815 ORTHO05D005742 4.4e-166 588.2 368 79.1
Ca_23774_v3 Cicer arietinum L. HOM05D004815 ORTHO05D005742 9.9e-166 587.0 368 78.5
Lj3g0020425 Lotus japonicus HOM05D004815 ORTHO05D005742 5.4e-164 581.3 368 78.0
arahy.Tifrunner.gnm1.ann1.GZV6IQ Arachis hypogaea HOM05D004815 ORTHO05D005742 6.6e-162 574.3 368 76.6
VMungo0331G0142 Vigna mungo HOM05D004815 ORTHO05D005742 8.6e-162 573.9 368 78.3
arahy.Tifrunner.gnm1.ann1.32Q5MD Arachis hypogaea HOM05D004815 ORTHO05D005742 5.6e-161 571.2 368 76.6
TPR.G17590 Trifolium pratense HOM05D004815 ORTHO05D005742 5.2e-159 564.7 367 77.4
TPR.G17395 Trifolium pratense HOM05D004815 ORTHO05D005742 2.0e-158 562.8 369 76.2
Glyma.07G080200 Glycine max HOM05D004815 ORTHO05D005742 2.6e-158 562.4 351 79.8
CiPaw.01G257600 Carya illinoinensis HOM05D004815 ORTHO05D005742 2.0e-150 536.2 370 71.1
Phvul.010G089200 Phaseolus vulgaris HOM05D004815 ORTHO05D005742 5.8e-150 534.6 345 78.6
Haze_16704 Corylus avellana HOM05D004815 ORTHO05D005742 1.7e-149 533.1 368 71.2
RcHm_v2.0_Chr1g0351921 Rosa chinensis HOM05D004815 ORTHO05D005742 7.1e-148 527.7 370 69.5
Cfa001810 Carpinus fangiana HOM05D004815 ORTHO05D005742 3.0e-146 522.3 370 70.0
Manes.01G263200 Manihot esculenta HOM05D004815 ORTHO05D005742 3.0e-146 522.3 369 69.9
Psat4g200880 Pisum sativum HOM05D004815 ORTHO05D005742 3.0e-146 522.3 350 76.9
MD02G1195800 Malus domestica HOM05D004815 ORTHO05D005742 1.9e-145 519.6 370 67.8
Potri.002G152300 Populus trichocarpa HOM05D004815 ORTHO05D005742 1.9e-145 519.6 370 70.0
Manes.05G040900 Manihot esculenta HOM05D004815 ORTHO05D005742 4.8e-144 515.0 370 68.9
FAN01G1324 Fragaria x ananassa HOM05D004815 ORTHO05D005742 1.4e-143 513.5 370 67.8
Lalb_Chr19g0127171 Lupinus albus HOM05D004815 ORTHO05D005742 6.9e-143 511.1 373 69.7
Ciclev10020702m.g Citrus clementina HOM05D004815 ORTHO05D005742 2.0e-142 509.6 370 68.6
GSVIVG01027589001 Vitis vinifera HOM05D004815 ORTHO05D005742 2.6e-142 509.2 370 67.6
FAN10G2694 Fragaria x ananassa HOM05D004815 ORTHO05D005742 9.9e-142 507.3 370 67.3
TAR629G0568 Trochodendron aralioides HOM05D004815 ORTHO05D005742 2.2e-141 506.1 371 68.5
Duzib133G0793 Durio zibethinus HOM05D004815 ORTHO05D005742 1.9e-140 503.1 372 68.3
Potri.014G078300 Populus trichocarpa HOM05D004815 ORTHO05D005742 1.2e-139 500.4 370 67.8
Atru.chr5.381_Atru.chr5.382 Acer truncatum HOM05D004815 ORTHO05D005742 3.5e-139 498.8 370 68.4
Sabra14G0053800 Salix brachista HOM05D004815 ORTHO05D005742 1.8e-138 496.5 376 66.0
TWI23G0970 Tripterygium wilfordii HOM05D004815 ORTHO05D005742 1.8e-138 496.5 368 65.2
Gorai.001G172600 Gossypium raimondii HOM05D004815 ORTHO05D005742 3.0e-138 495.7 371 66.3
Thecc.01G370200 Theobroma cacao HOM05D004815 ORTHO05D005742 1.5e-137 493.4 370 68.1
TWI59G0538 Tripterygium wilfordii HOM05D004815 ORTHO05D005742 1.9e-137 493.0 370 64.9
Gohir.A07G144600 Gossypium hirsutum HOM05D004815 ORTHO05D005742 4.3e-137 491.9 371 66.3
Gohir.D07G150500 Gossypium hirsutum HOM05D004815 ORTHO05D005742 9.6e-137 490.7 371 66.0
FAN06G3277 Fragaria x ananassa HOM05D004815 ORTHO05D005742 2.1e-136 489.6 367 65.9
FAN06G3416 Fragaria x ananassa HOM05D004815 ORTHO05D005742 2.1e-136 489.6 367 65.9
Cpa.g.sc18.178 Carica papaya HOM05D004815 ORTHO05D005742 5.8e-134 481.5 370 65.1
TAR636G2513 Trochodendron aralioides HOM05D004815 ORTHO05D005742 2.2e-133 479.6 369 65.3
Cc09_g02920 Coffea canephora HOM05D004815 ORTHO05D005742 1.1e-132 477.2 370 63.5
CANSAT56G0719 Cannabis sativa HOM05D004815 ORTHO05D005742 3.2e-132 475.7 371 63.9
Actinidia31455 Actinidia chinensis HOM05D004815 ORTHO05D005742 9.3e-132 474.2 375 63.5
MELO3C022521.2 Cucumis melo HOM05D004815 ORTHO05D005742 3.5e-131 472.2 370 62.2
Cc02_g37080 Coffea canephora HOM05D004815 ORTHO05D005742 7.4e-129 464.5 370 62.2
CsaV3_6G005940 Cucumis sativus L. HOM05D004815 ORTHO05D005742 1.3e-128 463.8 370 61.6
Aqoxy7G00483 Aquilegia oxysepala HOM05D004815 ORTHO05D005742 1.6e-128 463.4 371 64.7
Lj7C524T7 Lonicera japonica HOM05D004815 ORTHO05D005742 8.2e-128 461.1 368 64.1
Sabra02G0120600 Salix brachista HOM05D004815 ORTHO05D005742 4.0e-127 458.8 370 64.3
SGA_v2.0_scaffold153G37057 Striga asiatica HOM05D004815 ORTHO05D005742 3.4e-126 455.7 368 61.4
Sed0027777 Sechium edule HOM05D004815 ORTHO05D005742 8.4e-125 451.1 372 60.2
PGR031G2979 Punica granatum HOM05D004815 ORTHO05D005742 2.5e-124 449.5 369 62.1
AUR62033376 Chenopodium quinoa HOM05D004815 ORTHO05D005742 3.5e-123 445.7 371 61.7
Rhsim07G0022400 Rhododendron simsii HOM05D004815 ORTHO05D005742 7.9e-123 444.5 361 62.3
SalBow7G0216 Salvia bowleyana HOM05D004815 ORTHO05D005742 3.9e-122 442.2 412 54.6
PGSC0003DMG400000005 Solanum tuberosum HOM05D004815 ORTHO05D005742 3.9e-122 442.2 370 59.2
EL10Ac1g00976 Beta vulgaris HOM05D004815 ORTHO05D005742 1.1e-121 440.7 371 60.1
Nitab4.5_0013229g0020 Nicotiana tabacum HOM05D004815 ORTHO05D005742 1.9e-121 439.9 370 59.2
QL08p050919 Quercus lobata HOM05D004815 ORTHO05D005742 2.5e-121 439.5 329 66.6
Solyc01g091900.3 Solanum lycopersicum HOM05D004815 ORTHO05D005742 5.7e-121 438.3 371 59.3
CAN.G170.62 Capsicum annuum HOM05D004815 ORTHO05D005742 4.8e-120 435.3 370 58.4
MSTRG.20784 Avicennia marina HOM05D004815 ORTHO05D005742 6.3e-120 434.9 369 58.5
MBI04_g28567_MAGBIO Magnolia biondii HOM05D004815 ORTHO05D005742 1.8e-119 433.3 355 62.5
PSO782G2788 Papaver somniferum HOM05D004815 ORTHO05D005742 1.8e-119 433.3 372 60.5
PSO478G4379 Papaver somniferum HOM05D004815 ORTHO05D005742 4.1e-119 432.2 372 59.9
FvH4_7g12840 Fragaria vesca HOM05D004815 ORTHO05D005742 5.3e-119 431.8 329 64.7
Duzib138G1778 Durio zibethinus HOM05D004815 ORTHO05D005742 9.0e-119 431.0 349 63.9
Carub.0004s2834 Capsella rubella HOM05D004815 ORTHO05D005742 2.6e-118 429.5 377 58.9
Sp4g27730 Schrenkiella parvula HOM05D004815 ORTHO05D005742 2.9e-117 426.0 375 57.1
Oeu059223.1 Olea europaea HOM05D003859 ORTHO05D004927 6.5e-117 424.9 371 60.4
ClCG06G000170 Citrullus lanatus HOM05D004815 ORTHO05D005742 8.5e-117 424.5 370 58.6
Lalb_Chr01g0021231 Lupinus albus HOM05D004815 ORTHO05D005742 1.9e-116 423.3 368 61.7
Aa31LG1G27160 Aethionema arabicum HOM05D004815 ORTHO05D005742 7.2e-116 421.4 374 57.5
Migut.B01673 Erythranthe guttata HOM05D004815 ORTHO05D005742 2.7e-115 419.5 368 58.2
AL4G44860 Arabidopsis lyrata HOM05D004815 ORTHO05D005742 4.6e-115 418.7 373 57.6
ECA236G5005 Erigeron canadensis HOM05D004815 ORTHO05D005742 2.3e-114 416.4 372 58.6
BcaB01g03258 Brassica carinata HOM05D004815 ORTHO05D005742 8.8e-114 414.5 375 56.0
Thhalv10001499m.g Eutrema salsugineum HOM05D004815 ORTHO05D005742 8.8e-114 414.5 374 56.7
HanXRQChr06g0169351 Helianthus annuus HOM05D004815 ORTHO05D005742 3.3e-113 412.5 369 57.7
Sc02g0002260 Simmondsia chinensis HOM05D004815 ORTHO05D005742 4.3e-113 412.1 363 58.1
A05p05650 Brassica napus HOM05D004815 ORTHO05D005742 5.7e-113 411.8 376 55.9
A03p25310 Brassica napus HOM05D004815 ORTHO05D005742 7.4e-113 411.4 373 57.1
BraA05t19537Z Brassica rapa HOM05D004815 ORTHO05D005742 7.4e-113 411.4 376 55.9
AT2G45690 Arabidopsis thaliana HOM05D004815 ORTHO05D005742 1.7e-112 410.2 372 56.2
vmacro13348 Vaccinium macrocarpon HOM05D004815 ORTHO05D005742 4.8e-112 408.7 403 54.3
DCAR_006900 Daucus carota HOM05D004815 ORTHO05D005742 1.1e-111 407.5 345 60.6
Prupe.2G152800 Prunus persica HOM05D004815 ORTHO05D005742 1.1e-111 407.5 303 67.3
Hund27330 Selenicereus undatus HOM05D004815 ORTHO05D005742 1.1e-111 407.5 385 56.4
BcaC02g12192 Brassica carinata HOM05D004815 ORTHO05D005742 4.1e-111 405.6 376 54.3
Lsat_1_v5_gn_7_8041 Lactuca sativa HOM05D004815 ORTHO05D005742 9.1e-111 404.4 353 59.2
BolC4t22283H Brassica oleracea HOM05D004815 ORTHO05D005742 1.2e-110 404.1 376 54.3
C03p30200 Brassica napus HOM05D004815 ORTHO05D005742 2.0e-110 403.3 378 55.8
Nn1g01309 Nelumbo nucifera HOM05D004815 ORTHO05D005742 3.4e-110 402.5 326 63.8
Peaxi162Scf00021g00232 Petunia axillaris HOM05D004815 ORTHO05D005742 4.5e-110 402.1 347 58.8
BcaC01g05112 Brassica carinata HOM05D004815 ORTHO05D005742 1.3e-109 400.6 379 55.9
HanXRQChr04g0121731 Helianthus annuus HOM05D004815 ORTHO05D005742 2.2e-109 399.8 353 59.8
BolC3t15369H Brassica oleracea HOM05D004815 ORTHO05D005742 3.8e-109 399.1 378 55.8
BcaB02g09018 Brassica carinata HOM05D004815 ORTHO05D005742 5.0e-109 398.7 383 53.5
Ciclev10023945m.g Citrus clementina HOM05D004815 ORTHO05D005742 1.4e-108 397.1 368 57.3
BraA03t11735Z Brassica rapa HOM05D004815 ORTHO05D005742 4.2e-108 395.6 376 55.1
Actinidia09581 Actinidia chinensis HOM05D004815 ORTHO05D005742 2.1e-107 393.3 321 61.1
Solyc06g074460.4 Solanum lycopersicum HOM05D004815 ORTHO05D005742 3.3e-105 386.0 371 52.0
unitig_749.g14360 Utricularia gibba HOM05D003518 ORTHO05D005164 5.7e-105 385.2 350 56.9
Sopen06g030930 Solanum pennellii HOM05D004815 ORTHO05D005742 4.8e-104 382.1 371 51.5
AUR62004281 Chenopodium quinoa HOM05D004815 ORTHO05D005742 6.3e-104 381.7 371 55.8
MD02G1195700 Malus domestica HOM05D004815 ORTHO05D005742 1.8e-103 380.2 335 57.6
HPP92_004960 Vanilla planifolia HOM05D004815 ORTHO05D005742 2.9e-101 372.9 372 51.9
C04p06610 Brassica napus HOM05D004815 ORTHO05D005742 3.8e-101 372.5 354 53.1
Nitab4.5_0001901g0030 Nicotiana tabacum HOM05D004815 ORTHO05D005742 6.5e-101 371.7 368 50.8
Zm00001eb208530 Zea mays HOM05D004815 ORTHO05D005742 7.2e-100 368.2 381 52.0
CAN.G919.13 Capsicum annuum HOM05D004815 ORTHO05D005742 9.4e-100 367.9 370 50.5
Sopen01g037670 Solanum pennellii HOM05D004815 ORTHO05D005742 1.1e-97 360.9 323 57.6
Nitab4.5_0005459g0020 Nicotiana tabacum HOM05D004815 ORTHO05D005742 4.4e-97 359.0 392 48.2
THA.LOC104817269 Tarenaya hassleriana HOM05D004815 ORTHO05D005742 1.3e-96 357.5 332 56.6
Sed0004795 Sechium edule HOM05D004815 ORTHO05D005742 1.8e-95 353.6 300 58.3
Peaxi162Scf00114g00211 Petunia axillaris HOM05D004815 ORTHO05D005742 5.3e-95 352.1 346 52.6
Ah.15g094120 Amaranthus hybridus HOM05D001215 ORTHO05D001387 2.6e-94 349.7 367 52.3
Nitab4.5_0001127g0010 Nicotiana tabacum HOM05D004815 ORTHO05D005742 3.5e-86 322.8 373 49.3
Os02g0123200 Oryza sativa ssp. japonica HOM05D004815 ORTHO05D005742 1.1e-79 301.2 340 48.5
SEGI_15318 Sequoiadendron giganteum HOM05D004815 ORTHO05D005742 9.1e-79 298.1 381 44.4
SHI13492 Sapria himalayana HOM05D004815 ORTHO05D005742 2.7e-78 296.6 477 39.4
COL.COLO4_12639 Corchorus olitorius HOM05D004815 ORTHO05D005742 8.6e-77 291.6 215 66.5
CARHR140910 Cardamine hirsuta HOM05D004815 ORTHO05D005742 1.1e-76 291.2 297 51.5
Eucgr.D02393 Eucalyptus grandis HOM05D004815 ORTHO05D005742 1.2e-75 287.7 241 61.0
Dinv43746 Davidia involucrata HOM05D004815 ORTHO05D005742 2.3e-74 283.5 298 53.4
CSS0047010 Camellia sinensis var. sinensis HOM05D004815 ORTHO05D005742 1.1e-71 274.6 273 54.9
CSS0023679 Camellia sinensis var. sinensis HOM05D004815 ORTHO05D005742 3.8e-69 266.2 287 51.9
Mapoly0047s0037 Marchantia polymorpha HOM05D004815 ORTHO05D005742 3.3e-68 263.1 403 39.2
SMO147G0187 Selaginella moellendorffii HOM05D004815 ORTHO05D005742 2.8e-67 260.0 384 39.6
Dinv32412 Davidia involucrata HOM05D004815 ORTHO05D005742 1.4e-66 257.7 259 54.1
AagrBONN_evm.TU.Sc2ySwM_228.5506 Anthoceros agrestis HOM05D004815 ORTHO05D005742 5.8e-65 252.3 385 37.9
Eucgr.D02410 Eucalyptus grandis HOM05D004815 ORTHO05D005742 7.0e-63 245.4 241 55.6
ATR0757G223 Amborella trichopoda HOM05D004815 ORTHO05D005742 9.2e-63 245.0 233 54.5
CDE11G0368 Ceratophyllum demersum HOM05D004815 ORTHO05D005742 2.1e-59 233.8 209 55.0
PGSC0003DMG400007146 Solanum tuberosum HOM05D004815 ORTHO05D005742 6.2e-59 232.3 261 48.7
Gohir.A11G084200 Gossypium hirsutum HOM05D004815 ORTHO05D005742 1.4e-58 231.1 253 51.8
Pp3c20_6130 Physcomitrium patens HOM05D004815 ORTHO05D005742 1.3e-53 214.5 336 37.8
Eucgr.D02397 Eucalyptus grandis HOM05D004815 ORTHO05D005742 9.5e-52 208.4 204 54.9
AagrBONN_evm.TU.Sc2ySwM_369.172 Anthoceros agrestis HOM05D004815 ORTHO05D005742 6.8e-50 202.2 398 32.7
FAN10G0991 Fragaria x ananassa HOM05D004815 ORTHO05D005742 2.0e-49 200.7 115 80.0
ATR0757G181 Amborella trichopoda HOM05D004815 ORTHO05D005742 8.3e-48 195.3 152 67.1
CDE11G0585 Ceratophyllum demersum HOM05D004815 ORTHO05D005742 2.1e-46 190.7 137 64.2
Glyma.04G148600 Glycine max HOM05D004815 ORTHO05D005742 1.7e-29 134.4 74 87.8
Aa31LG6G10720 Aethionema arabicum HOM05D004815 ORTHO05D005742 3.2e-23 113.6 149 47.0
PRCOL_00005618 Prasinoderma coloniale HOM05D004815 ORTHO05D005742 4.2e-23 113.2 435 23.2
CBR_g3181 Chara braunii HOM05D004815 ORTHO05D005742 8.7e-21 105.5 207 31.9
Aa31sc1021G10 Aethionema arabicum HOM05D004815 ORTHO05D005742 3.4e-17 93.6 120 43.3
COL.COLO4_24134 Corchorus olitorius HOM05D000638 ORTHO05D000801 5.8e-17 92.8 73 64.4
Lj3g0018651 Lotus japonicus HOM05D004815 ORTHO05D005742 3.5e-14 83.6 42 92.9
MBI11_g13051_MAGBIO Magnolia biondii HOM05D004815 ORTHO05D005742 1.8e-10 71.2 72 51.4
RcHm_v2.0_Chr1g0351871 Rosa chinensis HOM05D004815 ORTHO05D005742 1.7e-08 64.7 49 65.3
RcHm_v2.0_Chr1g0351881 Rosa chinensis HOM05D004815 ORTHO05D005742 1.4e-07 61.6 42 73.8
Hund16967 Selenicereus undatus HOM05D004815 ORTHO05D005742 7.1e-07 59.3 102 38.2


User provided reference genes

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