Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr17g0339631 Lupinus albus HOM05D006135 ORTHO05D007533 1.8e-31 138.7 70 100.0
Lj3g0000255 Lotus japonicus HOM05D006135 ORTHO05D007533 7.9e-24 113.2 64 90.6
Lalb_Chr10g0096961 Lupinus albus HOM05D006135 ORTHO05D007533 7.9e-24 113.2 64 90.6
VMungo0331G1135 Vigna mungo HOM05D006135 ORTHO05D007533 1.0e-23 112.8 64 89.1
Phvul.010G098900 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 1.4e-23 112.5 64 89.1
Phvul.011G076500 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 1.4e-23 112.5 64 89.1
Glyma.07G070800 Glycine max HOM05D006135 ORTHO05D007533 2.6e-22 108.2 64 84.4
TPR.G19440 Trifolium pratense HOM05D006135 ORTHO05D007533 1.7e-21 105.5 65 83.1
Medtr8g030830 Medicago truncatula HOM05D006135 ORTHO05D007533 2.2e-21 105.1 65 87.7
Medtr8g446960 Medicago truncatula HOM05D006135 ORTHO05D007533 2.2e-21 105.1 65 84.6
Atru.chr11.1655 Acer truncatum HOM05D006135 ORTHO05D007533 2.8e-21 104.8 64 82.8
Gohir.A03G103900 Gossypium hirsutum HOM05D006135 ORTHO05D007533 4.8e-21 104.0 64 82.8
Gohir.D02G129100 Gossypium hirsutum HOM05D006135 ORTHO05D007533 4.8e-21 104.0 64 82.8
Gorai.005G144800 Gossypium raimondii HOM05D006135 ORTHO05D007533 4.8e-21 104.0 64 82.8
Rhsim08G0202600 Rhododendron simsii HOM05D006135 ORTHO05D007533 4.8e-21 104.0 64 82.8
Sed0023480 Sechium edule HOM05D006135 ORTHO05D007533 4.8e-21 104.0 64 81.2
Psat4g154880 Pisum sativum HOM05D006135 ORTHO05D007533 6.3e-21 103.6 65 83.1
Duzib268G0538 Durio zibethinus HOM05D006135 ORTHO05D007533 8.2e-21 103.2 64 82.8
FvH4_4g30260 Fragaria vesca HOM05D006135 ORTHO05D007533 8.2e-21 103.2 64 82.8
RcHm_v2.0_Chr4g0438561 Rosa chinensis HOM05D006135 ORTHO05D007533 8.2e-21 103.2 64 82.8
Thecc.02G333100 Theobroma cacao HOM05D006135 ORTHO05D007533 8.2e-21 103.2 64 81.2
COL.COLO4_27903 Corchorus olitorius HOM05D006135 ORTHO05D007533 1.1e-20 102.8 64 81.2
Sabra08G0071100 Salix brachista HOM05D006135 ORTHO05D007533 1.1e-20 102.8 64 81.2
FAN07G2159 Fragaria x ananassa HOM05D006135 ORTHO05D007533 1.4e-20 102.4 64 82.8
FAN12G3645 Fragaria x ananassa HOM05D006135 ORTHO05D007533 1.4e-20 102.4 64 82.8
FAN17G2903 Fragaria x ananassa HOM05D006135 ORTHO05D007533 1.4e-20 102.4 64 82.8
FAN22G2161 Fragaria x ananassa HOM05D006135 ORTHO05D007533 1.4e-20 102.4 64 82.8
MD16G1062500 Malus domestica HOM05D006135 ORTHO05D007533 1.4e-20 102.4 64 82.8
Aa31LG1G1130 Aethionema arabicum HOM05D006135 ORTHO05D007533 1.8e-20 102.1 64 81.2
QL03p071327 Quercus lobata HOM05D006135 ORTHO05D007533 1.8e-20 102.1 64 82.8
AL1G25700 Arabidopsis lyrata HOM05D006135 ORTHO05D007533 2.4e-20 101.7 64 81.2
A08p32230 Brassica napus HOM05D006135 ORTHO05D007533 2.4e-20 101.7 64 81.2
Eucgr.G02457 Eucalyptus grandis HOM05D006135 ORTHO05D007533 2.4e-20 101.7 64 79.7
Aa31LG2G7130 Aethionema arabicum HOM05D006135 ORTHO05D007533 3.1e-20 101.3 64 81.2
BcaB08g34333 Brassica carinata HOM05D006135 ORTHO05D007533 3.1e-20 101.3 64 81.2
CsaV3_6G032530 Cucumis sativus L. HOM05D006135 ORTHO05D007533 3.1e-20 101.3 64 78.1
CsaV3_6G033610 Cucumis sativus L. HOM05D006135 ORTHO05D007533 3.1e-20 101.3 64 78.1
Manes.07G067750 Manihot esculenta HOM05D006135 ORTHO05D007533 3.1e-20 101.3 64 79.7
Manes.07G067800 Manihot esculenta HOM05D006135 ORTHO05D007533 3.1e-20 101.3 64 79.7
MELO3C011427.2 Cucumis melo HOM05D006135 ORTHO05D007533 4.1e-20 100.9 64 78.1
PGR119G0479 Punica granatum HOM05D006135 ORTHO05D007533 4.1e-20 100.9 64 82.8
BcaC07g38705 Brassica carinata HOM05D006135 ORTHO05D007533 5.3e-20 100.5 64 79.7
C08p16350 Brassica napus HOM05D006135 ORTHO05D007533 5.3e-20 100.5 64 79.7
BolC8t49259H Brassica oleracea HOM05D006135 ORTHO05D007533 5.3e-20 100.5 64 79.7
Ciclev10032231m.g Citrus clementina HOM05D006135 ORTHO05D007533 6.9e-20 100.1 64 79.7
Peaxi162Scf00155g00910 Petunia axillaris HOM05D006135 ORTHO05D007533 1.2e-19 99.4 64 78.1
AT1G13870 Arabidopsis thaliana HOM05D006135 ORTHO05D007533 2.0e-19 98.6 64 78.1
AUR62013291 Chenopodium quinoa HOM05D006135 ORTHO05D007533 2.0e-19 98.6 64 76.6
SalBow2G2095 Salvia bowleyana HOM05D006135 ORTHO05D007533 2.0e-19 98.6 64 76.6
BraA08t35146Z Brassica rapa HOM05D006135 ORTHO05D007533 2.6e-19 98.2 64 78.1
THA.LOC104824063 Tarenaya hassleriana HOM05D006135 ORTHO05D007533 2.6e-19 98.2 64 76.6
Sabra10G0121200 Salix brachista HOM05D006135 ORTHO05D007533 3.4e-19 97.8 64 78.1
BcaC07g41617 Brassica carinata HOM05D006135 ORTHO05D007533 4.5e-19 97.4 64 78.1
Sc04g0007660 Simmondsia chinensis HOM05D006135 ORTHO05D007533 5.9e-19 97.1 64 75.0
EL10Ac6g14988 Beta vulgaris HOM05D006135 ORTHO05D007533 1.0e-18 96.3 64 73.4
BcaB03g13127 Brassica carinata HOM05D006135 ORTHO05D007533 1.0e-18 96.3 64 76.6
Migut.L01201 Erythranthe guttata HOM05D006135 ORTHO05D007533 1.0e-18 96.3 64 75.0
Carub.0001s1357 Capsella rubella HOM05D006135 ORTHO05D007533 1.3e-18 95.9 64 76.6
CARHR014240 Cardamine hirsuta HOM05D006135 ORTHO05D007533 1.3e-18 95.9 64 76.6
Oeu004576.4 Olea europaea HOM05D006135 ORTHO05D007533 1.3e-18 95.9 64 75.0
Potri.008G094600 Populus trichocarpa HOM05D006135 ORTHO05D007533 1.3e-18 95.9 64 76.6
Sp1g12090 Schrenkiella parvula HOM05D006135 ORTHO05D007533 1.7e-18 95.5 64 76.6
Ah.04g155380 Amaranthus hybridus HOM05D001254 ORTHO05D007533 2.2e-18 95.1 61 78.7
C08p46210 Brassica napus HOM05D006135 ORTHO05D007533 2.2e-18 95.1 64 76.6
BolC8t52170H Brassica oleracea HOM05D006135 ORTHO05D007533 2.2e-18 95.1 64 76.6
ECA246G3492 Erigeron canadensis HOM05D006135 ORTHO05D007533 2.2e-18 95.1 64 76.6
A09p62650 Brassica napus HOM05D006135 ORTHO05D007533 2.9e-18 94.7 64 76.6
BraA09t41629Z Brassica rapa HOM05D006135 ORTHO05D007533 2.9e-18 94.7 64 76.6
Cpa.g.sc1.112 Carica papaya HOM05D006135 ORTHO05D007533 3.8e-18 94.4 64 75.0
Hma1.2p1_0357F.1_g134610 Hydrangea macrophylla HOM05D006135 ORTHO05D007533 3.8e-18 94.4 64 75.0
CiPaw.06G091600 Carya illinoinensis HOM05D006135 ORTHO05D007533 5.0e-18 94.0 64 76.6
GSVIVG01012190001 Vitis vinifera HOM05D001577 ORTHO05D008017 5.0e-18 94.0 64 78.1
Cc11_g12150 Coffea canephora HOM05D006135 ORTHO05D007533 6.5e-18 93.6 64 75.0
Prupe.1G285000 Prunus persica HOM05D006135 ORTHO05D007533 6.5e-18 93.6 64 76.6
AUR62007931 Chenopodium quinoa HOM05D006135 ORTHO05D007533 8.5e-18 93.2 64 71.9
CSS0045883 Camellia sinensis var. sinensis HOM05D006135 ORTHO05D007533 1.1e-17 92.8 64 75.0
MSTRG.745 Avicennia marina HOM05D006135 ORTHO05D007533 1.4e-17 92.4 64 73.4
CAN.G792.64 Capsicum annuum HOM05D006135 ORTHO05D007533 1.4e-17 92.4 64 73.4
Lj6P780T42 Lonicera japonica HOM05D006135 ORTHO05D007533 1.4e-17 92.4 64 75.0
SGA_v2.0_scaffold308G48068 Striga asiatica HOM05D006135 ORTHO05D007533 1.4e-17 92.4 64 71.9
SGA_v2.0_scaffold36G14447 Striga asiatica HOM05D006135 ORTHO05D007533 2.5e-17 91.7 64 71.9
Dinv34082 Davidia involucrata HOM05D006135 ORTHO05D008017 4.2e-17 90.9 64 71.9
Sopen08g004100 Solanum pennellii HOM05D006135 ORTHO05D007533 5.5e-17 90.5 64 71.9
PGSC0003DMG400005786 Solanum tuberosum HOM05D006135 ORTHO05D007533 5.5e-17 90.5 64 71.9
Aqoxy6G00083 Aquilegia oxysepala HOM05D006135 ORTHO05D007533 7.2e-17 90.1 65 70.8
HanXRQChr12g0375331 Helianthus annuus HOM05D006135 ORTHO05D007533 1.2e-16 89.4 64 71.9
unitig_22.g6497 Utricularia gibba HOM05D006135 ORTHO05D007533 1.2e-16 89.4 64 70.3
PSO017G0525 Papaver somniferum HOM05D006135 ORTHO05D007533 1.6e-16 89.0 64 70.3
CDE04G1019 Ceratophyllum demersum HOM05D006135 ORTHO05D007533 2.1e-16 88.6 64 68.8
PSO170G2502 Papaver somniferum HOM05D006135 ORTHO05D007533 2.1e-16 88.6 64 68.8
SEGI_02005 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 3.6e-16 87.8 63 71.4
CANSAT64G1447 Cannabis sativa HOM05D006135 ORTHO05D007533 4.7e-16 87.4 66 72.7
Lsat_1_v5_gn_3_56041 Lactuca sativa HOM05D006135 ORTHO05D007533 4.7e-16 87.4 64 68.8
TAR622G1353 Trochodendron aralioides HOM05D006135 ORTHO05D007533 4.7e-16 87.4 63 69.8
MBI03_g07691_MAGBIO Magnolia biondii HOM05D006135 ORTHO05D007533 3.0e-15 84.7 64 68.8
Mapoly0008s0061 Marchantia polymorpha HOM05D006135 ORTHO05D007533 3.0e-15 84.7 63 65.1
SalBow6G2218 Salvia bowleyana HOM05D006135 ORTHO05D007533 5.2e-15 84.0 56 71.4
HPP92_017746 Vanilla planifolia HOM05D006135 ORTHO05D007533 8.8e-15 83.2 64 67.2
Nn3g17430 Nelumbo nucifera HOM05D006135 ORTHO05D007533 1.5e-14 82.4 65 64.6
CANSAT64G3010 Cannabis sativa HOM05D006135 ORTHO05D007533 2.0e-14 82.0 66 68.2
Pp3c10_170 Physcomitrium patens HOM05D006135 ORTHO05D007533 3.3e-14 81.3 63 61.9
TAR374G0384 Trochodendron aralioides HOM05D006135 ORTHO05D007533 3.3e-14 81.3 60 66.7
Os11g0312340 Oryza sativa ssp. japonica HOM05D006135 ORTHO05D007533 7.4e-14 80.1 64 68.8
SHI21260 Sapria himalayana HOM05D006135 ORTHO05D007533 1.8e-12 75.5 63 58.7
Zm00001eb298610 Zea mays HOM05D006135 ORTHO05D007533 2.4e-12 75.1 64 62.5
ATR1136G145 Amborella trichopoda HOM05D006135 ORTHO05D007533 3.1e-12 74.7 70 55.7
SMO115G0347 Selaginella moellendorffii HOM05D006135 ORTHO05D007533 1.3e-10 69.3 64 57.8
HPP92_017676 Vanilla planifolia HOM05D006135 ORTHO05D007533 3.2e-09 64.7 53 62.3
CBR_g32247 Chara braunii HOM05D006135 ORTHO05D007533 6.1e-08 60.5 74 48.6
MCO02G221 Micromonas commoda HOM05D006135 ORTHO05D007533 8.0e-08 60.1 61 52.5
Cre17.g711050 Chlamydomonas reinhardtii HOM05D006135 ORTHO05D007533 5.2e-07 57.4 63 49.2
PRCOL_00001916 Prasinoderma coloniale HOM05D006135 ORTHO05D007533 9.7e-06 53.1 64 48.4


User provided reference genes

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