Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr17g0339411 Lupinus albus HOM05D006343 ORTHO05D005694 7.6e-105 384.4 290 100.0
CiPaw.01G064000 Carya illinoinensis HOM05D006343 ORTHO05D005694 2.8e-38 163.3 320 56.2
Glyma.07G068200 Glycine max HOM05D006343 ORTHO05D005694 1.8e-37 160.6 311 42.4
CiPaw.02G033200 Carya illinoinensis HOM05D006343 ORTHO05D005694 4.0e-37 159.5 320 41.6
Glyma.16G034200 Glycine max HOM05D006343 ORTHO05D005694 2.9e-35 153.3 316 44.6
Ciclev10021525m.g Citrus clementina HOM05D006343 ORTHO05D005694 8.3e-35 151.8 317 38.8
Phvul.010G101000 Phaseolus vulgaris HOM05D006343 ORTHO05D005694 5.4e-34 149.1 295 47.5
Manes.05G031900 Manihot esculenta HOM05D006343 ORTHO05D005694 2.1e-33 147.1 323 41.8
VMungo0331G0061 Vigna mungo HOM05D006343 ORTHO05D005694 4.6e-33 146.0 309 47.6
Potri.014G087500 Populus trichocarpa HOM05D006343 ORTHO05D005694 1.0e-32 144.8 332 40.4
Prupe.2G173800 Prunus persica HOM05D006343 ORTHO05D005694 1.7e-32 144.1 316 44.3
Lj3g0021957 Lotus japonicus HOM05D006343 ORTHO05D005694 3.9e-32 142.9 217 45.2
Sabra14G0063500 Salix brachista HOM05D006343 ORTHO05D005694 1.1e-31 141.4 328 39.9
Manes.01G254700 Manihot esculenta HOM05D006343 ORTHO05D005694 1.9e-31 140.6 330 39.1
Potri.002G161700 Populus trichocarpa HOM05D006343 ORTHO05D005694 3.3e-31 139.8 328 39.6
QL04p054168 Quercus lobata HOM05D006343 ORTHO05D005694 3.3e-31 139.8 238 50.8
Sabra02G0128600 Salix brachista HOM05D006343 ORTHO05D005694 7.3e-31 138.7 325 37.2
Atru.chr5.528 Acer truncatum HOM05D006343 ORTHO05D005694 1.6e-30 137.5 313 41.9
MD01G1067400 Malus domestica HOM05D006343 ORTHO05D005694 2.8e-30 136.7 321 41.7
CANSAT56G2487 Cannabis sativa HOM05D006343 ORTHO05D005694 1.4e-29 134.4 333 45.3
Dinv43841 Davidia involucrata HOM05D006343 ORTHO05D005694 2.2e-27 127.1 295 38.6
MD07G1133500 Malus domestica HOM05D006343 ORTHO05D005694 7.1e-26 122.1 314 39.5
TAR629G3314 Trochodendron aralioides HOM05D006343 ORTHO05D005694 2.3e-24 117.1 325 35.4
GSVIVG01026998001 Vitis vinifera HOM05D006343 ORTHO05D005694 5.1e-24 115.9 312 37.5
Oeu055797.1 Olea europaea HOM05D006343 ORTHO05D005694 8.6e-24 115.2 311 34.4
Oeu035725.1 Olea europaea HOM05D003054 ORTHO05D003376 4.3e-23 112.8 238 35.3
Cfa003895 Carpinus fangiana HOM05D006343 ORTHO05D005694 7.3e-23 112.1 295 50.8
COL.COLO4_12739 Corchorus olitorius HOM05D006343 ORTHO05D005694 2.8e-22 110.2 314 50.3
CsaV3_6G000720 Cucumis sativus L. HOM05D006343 ORTHO05D005694 2.8e-22 110.2 316 39.2
Lsat_1_v5_gn_7_4060 Lactuca sativa HOM05D006343 ORTHO05D005694 4.7e-22 109.4 306 32.4
Oeu035719.1 Olea europaea HOM05D003054 ORTHO05D003376 6.2e-22 109.0 238 34.5
Duzib138G0695 Durio zibethinus HOM05D006343 ORTHO05D005694 1.8e-21 107.5 301 46.8
Gorai.007G101600 Gossypium raimondii HOM05D006343 ORTHO05D005694 2.4e-21 107.1 311 45.3
RcHm_v2.0_Chr1g0357021 Rosa chinensis HOM05D006343 ORTHO05D005694 6.9e-21 105.5 234 35.5
Nn1g01591 Nelumbo nucifera HOM05D006343 ORTHO05D005694 1.5e-20 104.4 219 41.1
SalBow6G3791 Salvia bowleyana HOM05D006343 ORTHO05D005694 2.0e-20 104.0 308 35.1
Hma1.2p1_0702F.1_g206150 Hydrangea macrophylla HOM05D006343 ORTHO05D005694 3.4e-20 103.2 314 38.5
MSTRG.18339 Avicennia marina HOM05D006343 ORTHO05D005694 7.6e-20 102.1 293 31.7
Lsat_1_v5_gn_7_4100 Lactuca sativa HOM05D006343 ORTHO05D005694 7.6e-20 102.1 300 31.7
Actinidia20887 Actinidia chinensis HOM05D006343 ORTHO05D005694 2.9e-19 100.1 301 32.2
FAN01G0301 Fragaria x ananassa HOM05D006343 ORTHO05D005694 6.4e-19 99.0 219 34.2
Rhsim01G0164400 Rhododendron simsii HOM05D006343 ORTHO05D005694 6.4e-19 99.0 225 34.7
FAN10G0914 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.1e-18 98.2 217 33.6
MSTRG.12522 Avicennia marina HOM05D006343 ORTHO05D005694 2.4e-18 97.1 211 34.6
FvH4_7g14980 Fragaria vesca HOM05D006343 ORTHO05D005694 2.4e-18 97.1 219 34.2
FAN10G3829 Fragaria x ananassa HOM05D006343 ORTHO05D005694 3.2e-18 96.7 219 33.8
FAN03G1905 Fragaria x ananassa HOM05D006343 ORTHO05D005694 5.4e-18 95.9 205 33.2
FAN06G0921 Fragaria x ananassa HOM05D006343 ORTHO05D005694 5.4e-18 95.9 219 33.8
Gohir.D11G095300 Gossypium hirsutum HOM05D006343 ORTHO05D005694 9.3e-18 95.1 316 46.5
vmacro20913 Vaccinium macrocarpon HOM05D006343 ORTHO05D005694 1.2e-17 94.7 228 35.5
CSS0004449 Camellia sinensis var. sinensis HOM05D006343 ORTHO05D005694 1.6e-17 94.4 304 34.9
Rhsim01G0164000 Rhododendron simsii HOM05D006343 ORTHO05D005694 3.5e-17 93.2 225 37.3
Nitab4.5_0001040g0020 Nicotiana tabacum HOM05D006343 ORTHO05D005694 7.8e-17 92.0 256 29.7
Oeu035722.1 Olea europaea HOM05D006343 ORTHO05D005694 7.8e-17 92.0 231 31.6
TWI23G0998 Tripterygium wilfordii HOM05D006343 ORTHO05D005694 2.3e-16 90.5 209 36.4
THA.LOC104825850 Tarenaya hassleriana HOM05D012121 ORTHO05D005694 3.0e-16 90.1 231 35.5
vmacro20912 Vaccinium macrocarpon HOM05D006343 ORTHO05D005694 3.9e-16 89.7 222 37.8
Thecc.01G356100 Theobroma cacao HOM05D006343 ORTHO05D005694 5.1e-16 89.4 309 52.1
Dinv32502 Davidia involucrata HOM05D006343 ORTHO05D005694 6.6e-16 89.0 254 32.7
DCAR_015699 Daucus carota HOM05D006343 ORTHO05D005694 1.9e-15 87.4 207 35.3
Eucgr.I00992 Eucalyptus grandis HOM05D006343 ORTHO05D005694 1.9e-15 87.4 262 32.4
Oeu035731.1 Olea europaea HOM05D006343 ORTHO05D005694 3.3e-15 86.7 317 26.8
CDE02G1832 Ceratophyllum demersum HOM05D006343 ORTHO05D005694 7.3e-15 85.5 217 33.2
MELO3C021196.2 Cucumis melo HOM05D006343 ORTHO05D005694 7.3e-15 85.5 322 43.2
Cc02_g38320 Coffea canephora HOM05D006343 ORTHO05D005694 9.6e-15 85.1 221 31.7
Haze_15537 Corylus avellana HOM05D006343 ORTHO05D005694 2.1e-14 84.0 298 49.0
DCAR_015701 Daucus carota HOM05D006343 ORTHO05D005694 6.2e-14 82.4 295 31.2
FvH4_7g14870 Fragaria vesca HOM05D006343 ORTHO05D005694 1.1e-13 81.6 310 28.1
Aqoxy7G00256 Aquilegia oxysepala HOM05D006343 ORTHO05D005694 1.8e-13 80.9 242 40.1
Cpa.g.sc11.35 Carica papaya HOM05D006343 ORTHO05D005694 1.8e-13 80.9 211 35.1
FAN10G3557 Fragaria x ananassa HOM05D006343 ORTHO05D005694 4.0e-13 79.7 326 30.1
FAN03G1311 Fragaria x ananassa HOM05D006343 ORTHO05D005694 6.9e-13 79.0 317 27.4
FvH4_7g14880 Fragaria vesca HOM05D006343 ORTHO05D005694 9.0e-13 78.6 149 34.2
Duzib133G0920 Durio zibethinus HOM05D006343 ORTHO05D005694 1.2e-12 78.2 302 49.7
FAN06G4353 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.2e-12 78.2 310 27.7
FAN06G3127 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.5e-12 77.8 148 33.8
Sed0018743 Sechium edule HOM05D006343 ORTHO05D005694 1.5e-12 77.8 235 34.5
Migut.D00457 Erythranthe guttata HOM05D006343 ORTHO05D005694 2.6e-12 77.0 180 66.7
FAN06G0140 Fragaria x ananassa HOM05D006343 ORTHO05D005694 4.5e-12 76.3 308 27.6
Medtr3g015950 Medicago truncatula HOM05D006343 ORTHO05D005694 5.8e-12 75.9 293 33.8
ClCG06G003540 Citrullus lanatus HOM05D006343 ORTHO05D005694 7.6e-12 75.5 85 58.8
Medtr8g028835 Medicago truncatula HOM05D006343 ORTHO05D005694 7.6e-12 75.5 72 61.1
PGR042G0313 Punica granatum HOM05D006343 ORTHO05D005694 7.6e-12 75.5 195 32.3
Medtr8g028845 Medicago truncatula HOM05D006343 ORTHO05D005694 9.9e-12 75.1 225 33.8
Nitab4.5_0001655g0110 Nicotiana tabacum HOM05D006343 ORTHO05D005694 1.3e-11 74.7 339 26.3
Nitab4.5_0003369g0030 Nicotiana tabacum HOM05D006343 ORTHO05D005694 1.3e-11 74.7 326 29.8
TWI14G1134 Tripterygium wilfordii HOM05D006343 ORTHO05D005694 1.7e-11 74.3 208 32.7
arahy.Tifrunner.gnm1.ann1.C4511I Arachis hypogaea HOM05D051984 ORTHO05D005694 2.2e-11 73.9 98 53.1
TPR.G17916 Trifolium pratense HOM05D006343 ORTHO05D005694 2.2e-11 73.9 74 58.1
CAN.G650.25 Capsicum annuum HOM05D006343 ORTHO05D005694 2.9e-11 73.6 240 29.2
CAN.G650.35 Capsicum annuum HOM05D006343 ORTHO05D005694 2.9e-11 73.6 250 28.4
SGA_v2.0_scaffold1G00635 Striga asiatica HOM05D006343 ORTHO05D005694 2.9e-11 73.6 342 26.9
arahy.Tifrunner.gnm1.ann1.ZG4E8S Arachis hypogaea HOM05D051984 ORTHO05D005694 4.9e-11 72.8 101 51.5
FAN10G3360 Fragaria x ananassa HOM05D006343 ORTHO05D005694 8.4e-11 72.0 148 32.4
Potri.014G099800 Populus trichocarpa HOM05D006343 ORTHO05D005694 8.4e-11 72.0 212 32.1
Gohir.A11G090700 Gossypium hirsutum HOM05D006343 ORTHO05D005694 1.1e-10 71.6 314 47.1
Rhsim06G0236200 Rhododendron simsii HOM05D006343 ORTHO05D005694 3.2e-10 70.1 156 35.9
Oeu035728.1 Olea europaea HOM05D006343 ORTHO05D005694 4.2e-10 69.7 205 28.3
FAN10G3545 Fragaria x ananassa HOM05D006343 ORTHO05D005694 5.4e-10 69.3 359 28.1
FAN10G1634 Fragaria x ananassa HOM05D006343 ORTHO05D005694 7.1e-10 68.9 148 31.8
CARHR248400 Cardamine hirsuta HOM05D012121 ORTHO05D005694 9.3e-10 68.6 233 30.0
Gohir.D08G153300 Gossypium hirsutum HOM05D006343 ORTHO05D005694 1.2e-09 68.2 305 41.0
BcaB01g02239 Brassica carinata HOM05D012121 ORTHO05D005694 2.1e-09 67.4 228 31.1
unitig_22.g5289 Utricularia gibba HOM05D006343 ORTHO05D005694 3.5e-09 66.6 291 30.9
CAN.G650.32 Capsicum annuum HOM05D006343 ORTHO05D005694 4.6e-09 66.2 330 25.2
THA.LOC104801575 Tarenaya hassleriana HOM05D012121 ORTHO05D005694 6.0e-09 65.9 122 41.0
Nitab4.5_0002749g0010 Nicotiana tabacum HOM05D006343 ORTHO05D005694 1.8e-08 64.3 327 27.2
CAN.G650.28 Capsicum annuum HOM05D006343 ORTHO05D005694 6.7e-08 62.4 234 26.9
CDE06G1281 Ceratophyllum demersum HOM05D006343 ORTHO05D005694 1.1e-07 61.6 141 29.8
Sopen02g019780 Solanum pennellii HOM05D006343 ORTHO05D005694 3.3e-07 60.1 240 36.7
CAN.G2424.1 Capsicum annuum HOM05D006343 ORTHO05D005694 4.3e-07 59.7 363 25.3
AL6G53170 Arabidopsis lyrata HOM05D012121 ORTHO05D005694 5.6e-07 59.3 229 28.8
ECA233G1044 Erigeron canadensis HOM05D006343 ORTHO05D005694 1.3e-06 58.2 239 25.5
Carub.0006s3693 Capsella rubella HOM05D012121 ORTHO05D005694 2.8e-06 57.0 246 28.0
Sp6g00380 Schrenkiella parvula HOM05D012121 ORTHO05D005694 2.8e-06 57.0 218 27.5
Solyc02g070700.3 Solanum lycopersicum HOM05D006343 ORTHO05D005694 2.8e-06 57.0 233 35.2


User provided reference genes

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