Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr17g0339031 Lupinus albus HOM05D004687 ORTHO05D006002 7.7e-173 610.5 342 100.0
Lalb_Chr10g0096671 Lupinus albus HOM05D004687 ORTHO05D006002 8.4e-127 457.6 345 74.5
Glyma.16G032000 Glycine max HOM05D004687 ORTHO05D006002 1.0e-100 370.9 353 59.8
VMungo0331G0070 Vigna mungo HOM05D004687 ORTHO05D006002 1.8e-89 333.6 351 54.7
Lj3g0008911 Lotus japonicus HOM05D004687 ORTHO05D006002 5.0e-87 325.5 348 56.9
Phvul.010G104100 Phaseolus vulgaris HOM05D004687 ORTHO05D006002 3.9e-84 315.8 354 53.7
Ca_03498_v3 Cicer arietinum L. HOM05D004687 ORTHO05D006002 2.0e-83 313.5 348 54.3
Psat4g212240 Pisum sativum HOM05D004687 ORTHO05D006002 1.3e-79 300.8 345 52.2
Medtr8g028580 Medicago truncatula HOM05D004687 ORTHO05D006002 6.5e-79 298.5 339 51.9
arahy.Tifrunner.gnm1.ann1.PSKN5N Arachis hypogaea HOM05D004687 ORTHO05D006002 8.8e-76 288.1 351 51.3
arahy.Tifrunner.gnm1.ann1.X9JZY0 Arachis hypogaea HOM05D004687 ORTHO05D006002 7.4e-75 285.0 351 50.7
TPR.G28289 Trifolium pratense HOM05D004687 ORTHO05D006002 3.7e-74 282.7 346 50.3
Cfa003875 Carpinus fangiana HOM05D004687 ORTHO05D006002 3.8e-63 246.1 361 46.0
Haze_15561 Corylus avellana HOM05D004687 ORTHO05D006002 5.0e-63 245.7 357 45.7
CiPaw.02G034500 Carya illinoinensis HOM05D004687 ORTHO05D006002 5.0e-55 219.2 355 43.1
CANSAT56G3669 Cannabis sativa HOM05D004687 ORTHO05D006002 1.6e-53 214.2 358 41.3
QL04p055402 Quercus lobata HOM05D004687 ORTHO05D006002 4.4e-51 206.1 361 41.8
Prupe.2G177100 Prunus persica HOM05D004687 ORTHO05D006002 1.1e-49 201.4 320 44.7
Ciclev10019565m.g Citrus clementina HOM05D004687 ORTHO05D006002 3.3e-46 189.9 346 44.5
Atru.chr5.577 Acer truncatum HOM05D004687 ORTHO05D006002 4.3e-46 189.5 357 40.9
Atru.chr5.560 Acer truncatum HOM05D004687 ORTHO05D006002 1.8e-44 184.1 357 40.6
Dinv32519 Davidia involucrata HOM05D004687 ORTHO05D006002 6.8e-44 182.2 363 39.7
MD01G1070600 Malus domestica HOM05D004687 ORTHO05D006002 1.9e-41 174.1 315 41.6
TAR374G1208 Trochodendron aralioides HOM05D004687 ORTHO05D006002 3.2e-41 173.3 373 37.3
Gohir.D11G097000 Gossypium hirsutum HOM05D004687 ORTHO05D006002 7.0e-41 172.2 343 40.2
Gorai.007G103300 Gossypium raimondii HOM05D004687 ORTHO05D006002 1.2e-40 171.4 342 38.0
Cpa.g.sc184.31 Carica papaya HOM05D004687 ORTHO05D006002 6.6e-39 165.6 349 40.7
GSVIVG01026963001 Vitis vinifera HOM05D004687 ORTHO05D006002 4.3e-38 162.9 362 39.2
CSS0026327 Camellia sinensis var. sinensis HOM05D004687 ORTHO05D006002 2.1e-37 160.6 349 37.8
RcHm_v2.0_Chr1g0357651 Rosa chinensis HOM05D004687 ORTHO05D006002 4.0e-36 156.4 321 38.3
Lj7A508T42 Lonicera japonica HOM05D004687 ORTHO05D006002 1.2e-35 154.8 354 37.0
Gohir.A11G092200 Gossypium hirsutum HOM05D004687 ORTHO05D006002 1.5e-35 154.5 342 37.1
Manes.01G252600 Manihot esculenta HOM05D004687 ORTHO05D006002 1.5e-35 154.5 355 39.7
Thecc.01G352900 Theobroma cacao HOM05D004687 ORTHO05D006002 1.5e-35 154.5 356 40.2
COL.COLO4_12774 Corchorus olitorius HOM05D004687 ORTHO05D006002 2.6e-35 153.7 342 40.4
Duzib138G0011 Durio zibethinus HOM05D004687 ORTHO05D006002 4.4e-35 152.9 346 42.8
Rhsim07G0010800 Rhododendron simsii HOM05D004687 ORTHO05D006002 7.5e-35 152.1 367 34.9
FAN01G0098 Fragaria x ananassa HOM05D004687 ORTHO05D006002 4.9e-34 149.4 308 38.0
FAN10G0227 Fragaria x ananassa HOM05D004687 ORTHO05D006002 4.9e-34 149.4 319 38.6
FAN10G4173 Fragaria x ananassa HOM05D004687 ORTHO05D006002 6.4e-34 149.1 319 38.6
Eucgr.D02323 Eucalyptus grandis HOM05D004687 ORTHO05D006002 8.3e-34 148.7 351 35.3
FvH4_7g15320 Fragaria vesca HOM05D004687 ORTHO05D006002 8.3e-34 148.7 315 36.8
FAN06G2065 Fragaria x ananassa HOM05D004687 ORTHO05D006002 8.3e-34 148.7 315 36.8
PGR031G1931 Punica granatum HOM05D004687 ORTHO05D006002 1.1e-33 148.3 353 35.1
TWI14G1112 Tripterygium wilfordii HOM05D004687 ORTHO05D006002 1.4e-33 147.9 364 40.1
Sc01g0003240 Simmondsia chinensis HOM05D004687 ORTHO05D006002 9.2e-33 145.2 367 33.8
FAN06G2774 Fragaria x ananassa HOM05D004687 ORTHO05D006002 1.2e-32 144.8 315 36.5
Sabra14G0065300 Salix brachista HOM05D004687 ORTHO05D006002 2.1e-32 144.1 334 34.4
Actinidia20159 Actinidia chinensis HOM05D004687 ORTHO05D006002 4.6e-32 142.9 332 34.3
Nn1g01677 Nelumbo nucifera HOM05D004687 ORTHO05D006002 7.8e-32 142.1 349 36.4
Cc02_g38540 Coffea canephora HOM05D004687 ORTHO05D006002 1.0e-31 141.7 362 35.1
FAN03G2011 Fragaria x ananassa HOM05D004687 ORTHO05D006002 3.0e-31 140.2 319 38.9
Solyc01g095090.3 Solanum lycopersicum HOM05D004687 ORTHO05D006002 5.1e-31 139.4 358 35.8
Oeu063679.1 Olea europaea HOM05D004687 ORTHO05D006002 1.1e-30 138.3 361 33.0
Peaxi162Scf00020g01410 Petunia axillaris HOM05D004687 ORTHO05D006002 1.5e-30 137.9 369 34.4
Hund27243 Selenicereus undatus HOM05D004687 ORTHO05D006002 2.1e-29 134.0 341 34.0
Nitab4.5_0000915g0140 Nicotiana tabacum HOM05D004687 ORTHO05D006002 3.6e-29 133.3 363 33.1
Aqoxy7G00187 Aquilegia oxysepala HOM05D004687 ORTHO05D006002 2.0e-27 127.5 380 31.6
PSO478G3840 Papaver somniferum HOM05D004687 ORTHO05D006002 2.6e-27 127.1 379 32.2
Migut.B01796 Erythranthe guttata HOM05D004687 ORTHO05D006002 1.3e-26 124.8 358 33.5
vmacro13233 Vaccinium macrocarpon HOM05D004687 ORTHO05D006002 2.4e-25 120.6 184 41.8
MSTRG.20861 Avicennia marina HOM05D004687 ORTHO05D006002 7.1e-25 119.0 360 30.8
ECA236G1242 Erigeron canadensis HOM05D004687 ORTHO05D006002 7.1e-25 119.0 347 32.0
PGSC0003DMG400000194 Solanum tuberosum HOM05D004687 ORTHO05D006002 1.6e-24 117.9 419 31.3
PSO266G0021 Papaver somniferum HOM05D004687 ORTHO05D006002 3.5e-24 116.7 380 30.0
Sed0003221 Sechium edule HOM05D004687 ORTHO05D006002 2.3e-23 114.0 355 32.4
THA.LOC104817038 Tarenaya hassleriana HOM05D004687 ORTHO05D006002 3.0e-23 113.6 342 34.5
MBI04_g26968_MAGBIO Magnolia biondii HOM05D004687 ORTHO05D006002 5.1e-23 112.8 355 31.5
ClCG06G003410 Citrullus lanatus HOM05D004687 ORTHO05D006002 1.5e-22 111.3 366 31.4
CsaV3_6G000900 Cucumis sativus L. HOM05D004687 ORTHO05D006002 7.3e-22 109.0 344 30.8
Actinidia20138 Actinidia chinensis HOM05D004687 ORTHO05D006002 4.7e-21 106.3 118 52.5
DCAR_006947 Daucus carota HOM05D004687 ORTHO05D006002 8.1e-21 105.5 315 32.4
Nitab4.5_0009238g0010 Nicotiana tabacum HOM05D004687 ORTHO05D006002 1.1e-20 105.1 368 31.5
SHI13367 Sapria himalayana HOM05D004687 ORTHO05D006002 3.1e-20 103.6 100 57.0
SGA_v2.0_scaffold95G28807 Striga asiatica HOM05D004687 ORTHO05D006002 1.5e-19 101.3 299 32.4
Potri.014G089800 Populus trichocarpa HOM05D004687 ORTHO05D006002 2.0e-19 100.9 333 29.1
Lsat_1_v5_gn_7_3881 Lactuca sativa HOM05D004687 ORTHO05D006002 2.6e-19 100.5 138 46.4
Sopen01g038880 Solanum pennellii HOM05D004687 ORTHO05D006002 2.6e-19 100.5 332 31.6
Carub.0006s3633 Capsella rubella HOM05D004687 ORTHO05D006002 3.8e-18 96.7 161 41.6
AT4G01270 Arabidopsis thaliana HOM05D004687 ORTHO05D006002 1.2e-16 91.7 121 47.1
MELO3C021180.2 Cucumis melo HOM05D004687 ORTHO05D006002 4.6e-16 89.7 349 28.9
Thhalv10029490m.g Eutrema salsugineum HOM05D004687 ORTHO05D006002 1.0e-15 88.6 188 37.2
CARHR249040 Cardamine hirsuta HOM05D004687 ORTHO05D006002 1.3e-15 88.2 162 40.1
SalBow3G3455 Salvia bowleyana HOM05D004687 ORTHO05D006002 1.3e-15 88.2 354 29.1
HanXRQChr06g0170331 Helianthus annuus HOM05D004687 ORTHO05D006002 2.3e-15 87.4 129 43.4
AL6G52120 Arabidopsis lyrata HOM05D004687 ORTHO05D006002 3.0e-15 87.0 251 30.7
Sp6g00860 Schrenkiella parvula HOM05D004687 ORTHO05D006002 5.1e-15 86.3 120 46.7
CSS0021310 Camellia sinensis var. sinensis HOM05D004687 ORTHO05D006002 1.1e-14 85.1 308 33.4
CSS0036615 Camellia sinensis var. sinensis HOM05D004687 ORTHO05D006002 1.1e-14 85.1 308 33.4
ATR0661G462 Amborella trichopoda HOM05D004687 ORTHO05D006002 5.6e-14 82.8 358 28.5
A09p00090 Brassica napus HOM05D004687 ORTHO05D006002 5.6e-14 82.8 98 48.0
Aa31LG5G750 Aethionema arabicum HOM05D004687 ORTHO05D006002 7.3e-14 82.4 348 28.4
BraA03t12367Z Brassica rapa HOM05D004687 ORTHO05D006002 7.3e-14 82.4 166 39.2
BcaB01g02150 Brassica carinata HOM05D004687 ORTHO05D006002 1.2e-13 81.6 165 40.6
BcaC04g24137 Brassica carinata HOM05D004687 ORTHO05D006002 1.2e-13 81.6 98 48.0
C03p38970 Brassica napus HOM05D004687 ORTHO05D006002 1.2e-13 81.6 164 39.6
C09p00700 Brassica napus HOM05D004687 ORTHO05D006002 1.2e-13 81.6 98 48.0
BolC9t53004H Brassica oleracea HOM05D004687 ORTHO05D006002 1.2e-13 81.6 98 48.0
HanXRQChr04g0120761 Helianthus annuus HOM05D004687 ORTHO05D006002 1.6e-13 81.3 143 39.2
BraA09t35739Z Brassica rapa HOM05D004687 ORTHO05D006002 3.6e-13 80.1 98 48.0
A03p31950 Brassica napus HOM05D004687 ORTHO05D006002 8.1e-13 79.0 119 44.5
BolC3t16169H Brassica oleracea HOM05D004687 ORTHO05D006002 8.1e-13 79.0 165 37.6
BcaB01g02289 Brassica carinata HOM05D004687 ORTHO05D006002 1.1e-12 78.6 209 34.9
BcaC01g06853 Brassica carinata HOM05D004687 ORTHO05D006002 1.1e-12 78.6 184 35.3
Prupe.2G177000 Prunus persica HOM05D004687 ORTHO05D006002 4.0e-12 76.6 100 45.0
MD01G1070500 Malus domestica HOM05D004687 ORTHO05D006002 4.9e-10 69.7 97 42.3
AUR62022616 Chenopodium quinoa HOM05D004687 ORTHO05D006002 1.4e-09 68.2 350 26.0
FAN23G1626 Fragaria x ananassa HOM05D004687 ORTHO05D006002 2.1e-08 64.3 104 40.4
Actinidia10067 Actinidia chinensis HOM05D004687 ORTHO05D006002 1.7e-07 61.2 237 28.7
RcHm_v2.0_Chr2g0111671 Rosa chinensis HOM05D004687 ORTHO05D006002 6.6e-07 59.3 192 31.2
SEGI_33633 Sequoiadendron giganteum HOM05D004687 ORTHO05D006002 1.9e-06 57.8 102 36.3
Aa31sc194G50 Aethionema arabicum HOM05D004687 ORTHO05D006002 3.3e-06 57.0 105 38.1
Zm00001eb416420 Zea mays HOM05D004687 ORTHO05D006002 4.3e-06 56.6 373 25.5
Solyc05g050020.3 Solanum lycopersicum HOM05D004687 ORTHO05D006002 5.6e-06 56.2 295 25.4
FAN26G2006 Fragaria x ananassa HOM05D004687 ORTHO05D006002 9.6e-06 55.5 193 30.1


User provided reference genes

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