Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr17g0338991 Lupinus albus HOM05D004213 ORTHO05D005091 5.4e-130 467.6 229 100.0
VMungo0540G0091 Vigna mungo HOM05D004213 ORTHO05D005091 1.0e-120 436.8 229 92.1
Lj3g0016777 Lotus japonicus HOM05D004213 ORTHO05D005091 3.9e-120 434.9 229 92.1
Lalb_Chr10g0096631 Lupinus albus HOM05D004213 ORTHO05D005091 3.9e-120 434.9 227 92.1
Ca_09511_v3 Cicer arietinum L. HOM05D004213 ORTHO05D005091 4.0e-117 424.9 229 89.1
Ca_30061_v3 Cicer arietinum L. HOM05D004213 ORTHO05D005091 4.0e-117 424.9 229 89.1
Phvul.006G145900 Phaseolus vulgaris HOM05D004213 ORTHO05D005091 5.3e-117 424.5 229 88.6
Psat4g157720 Pisum sativum HOM05D004213 ORTHO05D005091 6.9e-117 424.1 229 88.2
arahy.Tifrunner.gnm1.ann1.HWB48S Arachis hypogaea HOM05D004213 ORTHO05D005091 9.0e-117 423.7 229 88.2
arahy.Tifrunner.gnm1.ann1.LEY1JS Arachis hypogaea HOM05D004213 ORTHO05D005091 9.0e-117 423.7 229 88.2
Medtr8g028485 Medicago truncatula HOM05D004213 ORTHO05D005091 1.2e-116 423.3 230 89.6
TPR.G28293 Trifolium pratense HOM05D004213 ORTHO05D005091 5.8e-116 421.0 229 88.2
Medtr8g087440 Medicago truncatula HOM05D004213 ORTHO05D005091 1.7e-115 419.5 227 89.9
Psat5g297040 Pisum sativum HOM05D004213 ORTHO05D005091 1.9e-114 416.0 229 86.9
Ca_03495_v3 Cicer arietinum L. HOM05D004213 ORTHO05D005091 3.2e-114 415.2 229 85.6
Glyma.16G031500 Glycine max HOM05D004213 ORTHO05D005091 2.7e-113 412.1 229 88.2
Glyma.15G111800 Glycine max HOM05D004213 ORTHO05D005091 4.0e-109 398.3 231 86.1
TPR.G7188 Trifolium pratense HOM05D004213 ORTHO05D005091 5.3e-109 397.9 232 84.9
Atru.chr7.1501 Acer truncatum HOM05D004213 ORTHO05D005091 1.7e-107 392.9 226 82.3
Glyma.09G007400 Glycine max HOM05D004213 ORTHO05D005091 2.2e-107 392.5 229 84.7
TWI09G0095 Tripterygium wilfordii HOM05D004213 ORTHO05D005091 1.2e-105 386.7 226 82.3
Ciclev10021940m.g Citrus clementina HOM05D004213 ORTHO05D005091 6.0e-105 384.4 226 79.6
Thecc.01G352200 Theobroma cacao HOM05D004213 ORTHO05D005091 3.9e-104 381.7 226 81.4
Eucgr.C02275 Eucalyptus grandis HOM05D004213 ORTHO05D005091 8.7e-104 380.6 226 81.0
CANSAT56G1246 Cannabis sativa HOM05D004213 ORTHO05D005091 7.4e-103 377.5 226 78.3
ClCG09G006700 Citrullus lanatus HOM05D004213 ORTHO05D005091 1.3e-102 376.7 226 80.5
Gorai.004G155200 Gossypium raimondii HOM05D004213 ORTHO05D005091 1.6e-102 376.3 229 79.5
Gohir.D08G149400 Gossypium hirsutum HOM05D004213 ORTHO05D005091 3.7e-102 375.2 229 79.0
Dinv43865 Davidia involucrata HOM05D004213 ORTHO05D005091 4.8e-102 374.8 227 79.3
Sed0018043 Sechium edule HOM05D004213 ORTHO05D005091 6.2e-102 374.4 226 78.8
Hma1.2p1_0623F.1_g191100 Hydrangea macrophylla HOM05D004213 ORTHO05D005091 8.2e-102 374.0 227 79.3
GSVIVG01026970001 Vitis vinifera HOM05D004213 ORTHO05D005091 1.4e-101 373.2 227 79.3
Rhsim07G0009900 Rhododendron simsii HOM05D004213 ORTHO05D005091 1.8e-101 372.9 227 79.3
RcHm_v2.0_Chr1g0366261 Rosa chinensis HOM05D004213 ORTHO05D005091 2.4e-101 372.5 228 79.4
Duzib138G1303 Durio zibethinus HOM05D004213 ORTHO05D005091 4.0e-101 371.7 226 80.1
MELO3C015876.2 Cucumis melo HOM05D004213 ORTHO05D005091 1.2e-100 370.2 227 77.1
FAN06G3506 Fragaria x ananassa HOM05D004213 ORTHO05D005091 1.5e-100 369.8 219 80.4
TAR374G1598 Trochodendron aralioides HOM05D004213 ORTHO05D005091 2.0e-100 369.4 227 78.4
PGR142G0776 Punica granatum HOM05D004213 ORTHO05D005091 3.4e-100 368.6 218 78.0
vmacro17287 Vaccinium macrocarpon HOM05D004213 ORTHO05D005091 3.4e-100 368.6 227 79.3
RcHm_v2.0_Chr3g0492131 Rosa chinensis HOM05D004213 ORTHO05D005091 7.6e-100 367.5 228 78.5
FvH4_7g21940 Fragaria vesca HOM05D004213 ORTHO05D005091 2.9e-99 365.5 219 79.0
THA.LOC104827605 Tarenaya hassleriana HOM05D004213 ORTHO05D005091 2.9e-99 365.5 226 75.2
PSO063G4449 Papaver somniferum HOM05D004213 ORTHO05D005091 3.8e-99 365.2 227 75.8
RcHm_v2.0_Chr3g0490801 Rosa chinensis HOM05D004213 ORTHO05D005091 3.8e-99 365.2 228 78.1
vmacro09727 Vaccinium macrocarpon HOM05D004213 ORTHO05D005091 4.9e-99 364.8 227 77.5
Gohir.A04G053400 Gossypium hirsutum HOM05D004213 ORTHO05D005091 6.5e-99 364.4 229 76.4
COL.COLO4_19238 Corchorus olitorius HOM05D004213 ORTHO05D005091 8.4e-99 364.0 234 77.4
FAN01G2056 Fragaria x ananassa HOM05D004213 ORTHO05D005091 8.4e-99 364.0 219 79.5
PSO017G5376 Papaver somniferum HOM05D004213 ORTHO05D005091 8.4e-99 364.0 227 75.8
Potri.002G164800 Populus trichocarpa HOM05D004213 ORTHO05D005091 1.9e-98 362.8 226 75.7
CsaV3_7G028460 Cucumis sativus L. HOM05D004213 ORTHO05D005091 2.5e-98 362.5 221 76.9
MBI16_g00685_MAGBIO Magnolia biondii HOM05D004213 ORTHO05D005091 7.1e-98 360.9 218 78.9
Actinidia20165 Actinidia chinensis HOM05D004213 ORTHO05D005091 9.3e-98 360.5 248 73.0
Hma1.2p1_1013F.1_g247750 Hydrangea macrophylla HOM05D004213 ORTHO05D005091 2.1e-97 359.4 229 75.1
Nitab4.5_0001141g0050 Nicotiana tabacum HOM05D004213 ORTHO05D005091 6.0e-97 357.8 224 76.8
Hund26583 Selenicereus undatus HOM05D004213 ORTHO05D005091 1.8e-96 356.3 235 74.9
vmacro13225 Vaccinium macrocarpon HOM05D004213 ORTHO05D005091 1.8e-96 356.3 226 76.5
Migut.B01801 Erythranthe guttata HOM05D004213 ORTHO05D005091 3.9e-96 355.1 224 74.6
FAN03G2999 Fragaria x ananassa HOM05D004213 ORTHO05D005091 1.9e-95 352.8 234 73.1
FAN10G1826 Fragaria x ananassa HOM05D004213 ORTHO05D005091 1.9e-95 352.8 235 73.2
Nitab4.5_0000116g0380 Nicotiana tabacum HOM05D004213 ORTHO05D005091 3.3e-95 352.1 229 74.7
PGSC0003DMG400031793 Solanum tuberosum HOM05D004213 ORTHO05D005091 3.3e-95 352.1 224 76.3
Oeu010628.1 Olea europaea HOM05D004213 ORTHO05D005091 4.3e-95 351.7 230 73.0
Os06g0300600 Oryza sativa ssp. japonica HOM05D004213 ORTHO05D005091 5.7e-95 351.3 234 72.6
ATR0751G024 Amborella trichopoda HOM05D004213 ORTHO05D005091 9.7e-95 350.5 226 74.8
Sabra02G0146700 Salix brachista HOM05D004213 ORTHO05D005091 9.7e-95 350.5 226 74.3
Sopen09g030140 Solanum pennellii HOM05D004213 ORTHO05D005091 9.7e-95 350.5 224 75.9
Aa31LG1G27530 Aethionema arabicum HOM05D004213 ORTHO05D005091 1.3e-94 350.1 225 72.4
HanXRQChr06g0170371 Helianthus annuus HOM05D004213 ORTHO05D005091 3.7e-94 348.6 231 73.2
Solyc09g075370.3 Solanum lycopersicum HOM05D004213 ORTHO05D005091 4.8e-94 348.2 224 75.9
Nitab4.5_0007641g0010 Nicotiana tabacum HOM05D004213 ORTHO05D005091 6.3e-94 347.8 224 74.6
Oeu004904.1 Olea europaea HOM05D004213 ORTHO05D005091 8.2e-94 347.4 232 71.1
Haze_15567 Corylus avellana HOM05D004213 ORTHO05D005091 1.1e-93 347.1 226 74.3
Carub.0001s1438 Capsella rubella HOM05D004213 ORTHO05D005091 1.8e-93 346.3 226 72.6
Cfa003870 Carpinus fangiana HOM05D004213 ORTHO05D005091 1.8e-93 346.3 226 73.5
AT1G14620 Arabidopsis thaliana HOM05D004213 ORTHO05D005091 3.1e-93 345.5 226 72.1
Sopen04g004260 Solanum pennellii HOM05D004213 ORTHO05D005091 4.1e-93 345.1 215 77.2
AL1G26590 Arabidopsis lyrata HOM05D004213 ORTHO05D005091 6.9e-93 344.4 226 71.7
HPP92_022817 Vanilla planifolia HOM05D004213 ORTHO05D005091 6.9e-93 344.4 214 76.2
CiPaw.02G035500 Carya illinoinensis HOM05D004213 ORTHO05D005091 9.0e-93 344.0 227 73.1
Thhalv10008660m.g Eutrema salsugineum HOM05D004213 ORTHO05D005091 1.2e-92 343.6 221 73.8
MD07G1193700 Malus domestica HOM05D004213 ORTHO05D005091 1.5e-92 343.2 230 75.2
MD07G1194000 Malus domestica HOM05D004213 ORTHO05D005091 1.5e-92 343.2 230 75.2
Sp4g28190 Schrenkiella parvula HOM05D004213 ORTHO05D005091 2.6e-92 342.4 226 72.1
CARHR015120 Cardamine hirsuta HOM05D004213 ORTHO05D005091 3.4e-92 342.0 226 71.7
BraA04t18889Z Brassica rapa HOM05D005821 ORTHO05D006649 4.5e-92 341.7 229 72.1
Sp1g12980 Schrenkiella parvula HOM05D004213 ORTHO05D005091 4.5e-92 341.7 226 72.6
BcaB01g03237 Brassica carinata HOM05D004213 ORTHO05D005091 1.0e-91 340.5 230 71.7
PGSC0003DMG400032548 Solanum tuberosum HOM05D004213 ORTHO05D005091 1.3e-91 340.1 224 75.0
BraA03t11766Z Brassica rapa HOM05D004213 ORTHO05D005091 1.7e-91 339.7 231 71.4
EL10Ac1g01391 Beta vulgaris HOM05D004213 ORTHO05D005091 2.9e-91 339.0 227 72.2
A03p25480 Brassica napus HOM05D004213 ORTHO05D005091 1.1e-90 337.0 231 71.0
BcaC01g05093 Brassica carinata HOM05D004213 ORTHO05D005091 1.9e-90 336.3 214 73.4
C03p30410 Brassica napus HOM05D004213 ORTHO05D005091 1.9e-90 336.3 214 73.4
C04p72100 Brassica napus HOM05D005821 ORTHO05D006649 2.5e-90 335.9 230 70.0
BcaC02g07022 Brassica carinata HOM05D004213 ORTHO05D005091 3.2e-90 335.5 230 70.0
BolC3t15389H Brassica oleracea HOM05D004213 ORTHO05D005091 3.2e-90 335.5 214 73.4
Gohir.A08G128100 Gossypium hirsutum HOM05D004213 ORTHO05D005091 5.5e-90 334.7 229 72.1
Zm00001eb381110 Zea mays HOM05D004213 ORTHO05D005091 7.2e-90 334.3 232 70.3
Lj9A589G62 Lonicera japonica HOM05D004213 ORTHO05D005091 1.6e-89 333.2 229 72.1
CSS0029792 Camellia sinensis var. sinensis HOM05D004213 ORTHO05D005091 2.1e-89 332.8 231 72.3
CSS0049269 Camellia sinensis var. sinensis HOM05D004213 ORTHO05D005091 2.1e-89 332.8 231 72.3
DCAR_025215 Daucus carota HOM05D004213 ORTHO05D005091 2.7e-89 332.4 225 70.7
CDE10G0889 Ceratophyllum demersum HOM05D004213 ORTHO05D005091 3.6e-89 332.0 222 71.6
SalBow3G3674 Salvia bowleyana HOM05D004213 ORTHO05D005091 4.6e-89 331.6 234 69.2
unitig_0.g337 Utricularia gibba HOM05D004213 ORTHO05D005091 4.6e-89 331.6 210 74.3
MSTRG.17300 Avicennia marina HOM05D004213 ORTHO05D005091 7.9e-89 330.9 227 70.9
MD10G1064600 Malus domestica HOM05D004213 ORTHO05D005091 7.9e-89 330.9 226 73.5
Ah.02g117780 Amaranthus hybridus HOM05D004213 ORTHO05D005091 2.0e-87 326.2 219 72.1
AUR62017900 Chenopodium quinoa HOM05D004213 ORTHO05D005091 2.5e-87 325.9 214 70.6
Manes.05G029000 Manihot esculenta HOM05D004213 ORTHO05D005091 3.3e-87 325.5 227 69.2
Aqoxy5G03866 Aquilegia oxysepala HOM05D004213 ORTHO05D005091 5.7e-87 324.7 227 69.2
CiPaw.01G067700 Carya illinoinensis HOM05D004213 ORTHO05D005091 7.4e-87 324.3 226 70.4
Peaxi162Scf00037g01020 Petunia axillaris HOM05D004213 ORTHO05D005091 9.7e-87 323.9 224 71.0
SGA_v2.0_scaffold4G02277 Striga asiatica HOM05D004213 ORTHO05D005091 2.2e-86 322.8 269 60.6
Nn1g07606 Nelumbo nucifera HOM05D004213 ORTHO05D005091 5.3e-85 318.2 229 69.0
AUR62003587 Chenopodium quinoa HOM05D004213 ORTHO05D005091 2.6e-84 315.8 214 69.2
Gorai.009G392100 Gossypium raimondii HOM05D004213 ORTHO05D005091 1.6e-81 306.6 229 68.1
Cc02_g38590 Coffea canephora HOM05D004213 ORTHO05D005091 2.3e-80 302.8 232 64.2
Dinv32523 Davidia involucrata HOM05D004213 ORTHO05D005091 2.6e-79 299.3 178 81.5
Lsat_1_v5_gn_7_2701 Lactuca sativa HOM05D004213 ORTHO05D005091 2.8e-78 295.8 230 63.9
ECA236G3941 Erigeron canadensis HOM05D004213 ORTHO05D005091 4.8e-78 295.0 219 63.9
FAN06G0959 Fragaria x ananassa HOM05D004213 ORTHO05D005091 4.1e-77 292.0 171 80.7
Solyc04g009140.4 Solanum lycopersicum HOM05D004213 ORTHO05D005091 1.5e-76 290.0 180 77.2
Lj9A590G54 Lonicera japonica HOM05D004213 ORTHO05D005091 5.5e-74 281.6 230 63.5
Cpa.g.sc11.71 Carica papaya HOM05D004213 ORTHO05D005091 4.7e-73 278.5 227 62.6
BolC4t28619H Brassica oleracea HOM05D005821 ORTHO05D005091 8.8e-72 274.2 212 63.7
Nn1g07699 Nelumbo nucifera HOM05D004213 ORTHO05D005091 3.3e-71 272.3 232 61.6
Gohir.D04G091100 Gossypium hirsutum HOM05D004213 ORTHO05D005091 1.5e-66 256.9 162 76.5
SEGI_36995 Sequoiadendron giganteum HOM05D004213 ORTHO05D005091 4.2e-66 255.4 223 52.5
CAN.G472.27 Capsicum annuum HOM05D004213 ORTHO05D005091 1.4e-64 250.4 159 74.2
Rhsim09G0104800 Rhododendron simsii HOM05D004213 ORTHO05D005091 1.8e-64 250.0 184 69.6
DCAR_009468 Daucus carota HOM05D004213 ORTHO05D005091 5.3e-61 238.4 157 70.7
Sc16g0003870 Simmondsia chinensis HOM05D004213 ORTHO05D005091 2.9e-59 232.6 167 69.5
Pp3c13_9680 Physcomitrium patens HOM05D004213 ORTHO05D005091 2.6e-55 219.5 225 50.2
Prupe.2G231400 Prunus persica HOM05D004213 ORTHO05D005091 2.6e-55 219.5 135 79.3
Mapoly0025s0100 Marchantia polymorpha HOM05D004213 ORTHO05D005091 2.7e-52 209.5 228 47.4
Medtr7g117435 Medicago truncatula HOM05D004213 ORTHO05D005091 3.5e-52 209.1 132 75.0
COL.COLO4_07824 Corchorus olitorius HOM05D004213 ORTHO05D005091 3.8e-51 205.7 186 57.5
CARHR141400 Cardamine hirsuta HOM05D004213 ORTHO05D005091 5.0e-51 205.3 177 61.6
AagrBONN_evm.TU.Sc2ySwM_117.3677 Anthoceros agrestis HOM05D004213 ORTHO05D005091 1.2e-49 200.7 202 52.0
AagrBONN_evm.TU.Sc2ySwM_228.381 Anthoceros agrestis HOM05D004213 ORTHO05D005091 3.6e-49 199.1 202 51.5
MBI16_g10331_MAGBIO Magnolia biondii HOM05D004213 ORTHO05D005091 1.8e-48 196.8 120 75.8
VMungo0331G0027 Vigna mungo HOM05D004213 ORTHO05D005091 3.9e-43 179.1 95 91.6
EL10Ac6g15290 Beta vulgaris HOM05D004213 ORTHO05D012437 9.2e-37 157.9 99 71.7
CBR_g37539 Chara braunii HOM05D004213 ORTHO05D005091 9.2e-37 157.9 209 40.7
MD05G1056600 Malus domestica HOM05D004213 ORTHO05D005091 1.7e-35 153.7 158 53.2
Atru.chr1.2758 Acer truncatum HOM05D004213 ORTHO05D005091 6.6e-35 151.8 225 43.6
C04p01920 Brassica napus HOM05D004213 ORTHO05D005091 2.1e-33 146.7 152 50.0
SMO271G0103 Selaginella moellendorffii HOM05D004213 ORTHO05D005091 2.7e-28 129.8 216 37.5
SHI13371 Sapria himalayana HOM05D004213 ORTHO05D005091 4.7e-25 119.0 104 59.6
MBI16_g18199_MAGBIO Magnolia biondii HOM05D004213 ORTHO05D005091 2.0e-23 113.6 80 72.5
FAN06G3959 Fragaria x ananassa HOM05D004213 ORTHO05D005091 1.1e-21 107.8 61 86.9
BcaC02g12495 Brassica carinata HOM05D004213 ORTHO05D005091 1.9e-21 107.1 90 57.8
MCO04G325 Micromonas commoda HOM05D004213 ORTHO05D005091 2.4e-21 106.7 202 31.2
FvH4_7g22001 Fragaria vesca HOM05D004065 ORTHO05D004806 3.2e-21 106.3 60 86.7
FAN01G2126 Fragaria x ananassa HOM05D004065 ORTHO05D004806 3.2e-21 106.3 60 86.7
FAN01G2862 Fragaria x ananassa HOM05D004213 ORTHO05D005091 4.1e-21 105.9 61 85.2
PGSC0003DMG402011505 Solanum tuberosum HOM05D004213 ORTHO05D005091 1.0e-19 101.3 67 73.1
Aa31LG5G23500 Aethionema arabicum HOM05D004213 ORTHO05D005091 2.3e-19 100.1 62 79.0
CAN.G467.8 Capsicum annuum HOM05D004213 ORTHO05D005091 7.3e-18 95.1 64 71.9
SMO308G0077 Selaginella moellendorffii HOM05D004213 ORTHO05D005091 3.1e-16 89.7 124 39.5
FAN03G3471 Fragaria x ananassa HOM05D004213 ORTHO05D005091 4.0e-16 89.4 59 74.6
Cfa024785 Carpinus fangiana HOM05D004213 ORTHO05D122664 1.1e-10 71.2 152 30.9
Rhsim07G0218600 Rhododendron simsii HOM05D004213 ORTHO05D339259 1.6e-09 67.4 40 75.0
COL.COLO4_35570 Corchorus olitorius HOM05D002230 ORTHO05D002441 2.1e-09 67.0 47 76.6
Actinidia10076 Actinidia chinensis HOM05D006382 ORTHO05D008938 6.2e-09 65.5 46 76.1
Glyma.U031114 Glycine max HOM05D004213 ORTHO05D005091 1.2e-07 61.2 39 79.5
Ah.13g065600 Amaranthus hybridus HOM05D000001 ORTHO05D010162 2.0e-07 60.5 39 76.9
PGSC0003DMG401011505 Solanum tuberosum HOM05D004213 ORTHO05D005091 2.2e-06 57.0 44 65.9
RcHm_v2.0_Chr1g0366151 Rosa chinensis HOM05D004213 ORTHO05D005091 8.4e-06 55.1 44 59.1


User provided reference genes

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