Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr17g0338791 Lupinus albus HOM05D006456 ORTHO05D007588 4.1e-111 404.8 219 100.0
Lalb_Chr10g0096361 Lupinus albus HOM05D006456 ORTHO05D007588 8.7e-85 317.4 223 78.0
Glyma.10G269500 Glycine max HOM05D006456 ORTHO05D007588 2.1e-62 243.0 217 57.1
Glyma.20G121600 Glycine max HOM05D006456 ORTHO05D007588 8.7e-61 237.7 217 55.8
Psat6g223800 Pisum sativum HOM05D006456 ORTHO05D007588 3.7e-59 232.3 221 62.0
Phvul.007G033000 Phaseolus vulgaris HOM05D006456 ORTHO05D007588 8.2e-59 231.1 214 59.3
Medtr1g109370 Medicago truncatula HOM05D006456 ORTHO05D007588 1.4e-58 230.3 219 62.6
GSVIVG01011822001 Vitis vinifera HOM05D006456 ORTHO05D007588 2.4e-58 229.6 218 52.8
Lj5g0005162 Lotus japonicus HOM05D006456 ORTHO05D007588 1.5e-57 226.9 217 61.3
Ca_11124_v3 Cicer arietinum L. HOM05D006456 ORTHO05D007588 1.7e-56 223.4 221 61.5
TPR.G4830 Trifolium pratense HOM05D006456 ORTHO05D007588 3.2e-55 219.2 227 57.7
CANSAT01G2803 Cannabis sativa HOM05D006456 ORTHO05D007588 4.2e-55 218.8 222 52.3
Dinv31583 Davidia involucrata HOM05D006456 ORTHO05D007588 4.2e-55 218.8 220 55.0
Oeu014300.2 Olea europaea HOM05D006456 ORTHO05D007588 7.2e-55 218.0 226 50.0
Rhsim12G0086900 Rhododendron simsii HOM05D006456 ORTHO05D007588 2.1e-54 216.5 220 52.3
CSS0027890 Camellia sinensis var. sinensis HOM05D006456 ORTHO05D007588 6.1e-54 214.9 223 52.5
Haze_00665 Corylus avellana HOM05D006456 ORTHO05D007588 1.8e-53 213.4 217 51.2
arahy.Tifrunner.gnm1.ann1.UW2YW6 Arachis hypogaea HOM05D006456 ORTHO05D007588 2.3e-53 213.0 218 54.6
CiPaw.05G243600 Carya illinoinensis HOM05D006456 ORTHO05D007588 3.9e-53 212.2 221 48.9
Manes.06G064100 Manihot esculenta HOM05D006456 ORTHO05D007588 1.9e-52 209.9 223 51.1
Oeu027684.2 Olea europaea HOM05D006456 ORTHO05D007588 1.9e-52 209.9 227 48.0
QL01p003354 Quercus lobata HOM05D006456 ORTHO05D007588 1.9e-52 209.9 223 52.9
TAR629G3159 Trochodendron aralioides HOM05D006456 ORTHO05D007588 1.9e-52 209.9 215 53.5
Prupe.1G318000 Prunus persica HOM05D006456 ORTHO05D007588 3.3e-52 209.1 220 53.6
CiPaw.06G016000 Carya illinoinensis HOM05D006456 ORTHO05D007588 5.7e-52 208.4 222 51.8
Nn4g23975 Nelumbo nucifera HOM05D006456 ORTHO05D007588 5.7e-52 208.4 224 53.6
Duzib248G0017 Durio zibethinus HOM05D006456 ORTHO05D007588 7.4e-52 208.0 219 52.1
Nitab4.5_0001999g0020 Nicotiana tabacum HOM05D006456 ORTHO05D007588 1.4e-50 203.8 221 50.7
MSTRG.2210 Avicennia marina HOM05D006456 ORTHO05D007588 3.1e-50 202.6 222 47.3
Thecc.02G220100 Theobroma cacao HOM05D006456 ORTHO05D007588 6.9e-50 201.4 217 50.2
DCAR_007270 Daucus carota HOM05D006456 ORTHO05D007588 3.4e-49 199.1 221 47.5
vmacro01410 Vaccinium macrocarpon HOM05D006456 ORTHO05D007588 1.3e-48 197.2 221 49.3
MD13G1034500 Malus domestica HOM05D006456 ORTHO05D007588 8.5e-48 194.5 223 49.8
ClCG05G022400 Citrullus lanatus HOM05D006456 ORTHO05D007588 3.2e-47 192.6 227 50.7
Gohir.A05G315000 Gossypium hirsutum HOM05D006456 ORTHO05D007588 3.2e-47 192.6 215 47.9
Gohir.D05G316500 Gossypium hirsutum HOM05D006456 ORTHO05D007588 5.5e-47 191.8 218 48.2
Gorai.009G338700 Gossypium raimondii HOM05D006456 ORTHO05D007588 5.5e-47 191.8 218 48.2
CAN.G99.9 Capsicum annuum HOM05D006456 ORTHO05D007588 7.9e-46 188.0 222 49.1
Lsat_1_v5_gn_3_56960 Lactuca sativa HOM05D006456 ORTHO05D007588 1.0e-45 187.6 222 48.2
MD16G1036000 Malus domestica HOM05D006456 ORTHO05D007588 2.3e-45 186.4 222 48.6
Solyc03g013030.3 Solanum lycopersicum HOM05D006456 ORTHO05D007588 2.3e-45 186.4 225 48.0
Sopen03g020360 Solanum pennellii HOM05D006456 ORTHO05D007588 2.3e-45 186.4 225 48.0
C06p37830 Brassica napus HOM05D006456 ORTHO05D007588 3.9e-45 185.7 222 47.7
FAN17G0635 Fragaria x ananassa HOM05D006456 ORTHO05D007588 6.7e-45 184.9 215 49.8
Sed0027511 Sechium edule HOM05D006456 ORTHO05D007588 6.7e-45 184.9 225 49.8
MELO3C012283.2 Cucumis melo HOM05D006456 ORTHO05D007588 8.8e-45 184.5 227 48.9
VMungo0720G1166 Vigna mungo HOM05D006456 ORTHO05D007588 8.8e-45 184.5 214 53.7
FAN12G2031 Fragaria x ananassa HOM05D006456 ORTHO05D007588 2.0e-44 183.3 222 48.6
FvH4_4g26560 Fragaria vesca HOM05D006456 ORTHO05D007588 2.6e-44 183.0 218 50.5
FAN12G0878 Fragaria x ananassa HOM05D006456 ORTHO05D007588 5.7e-44 181.8 223 48.4
arahy.Tifrunner.gnm1.ann1.WCM1NC Arachis hypogaea HOM05D006456 ORTHO05D007588 7.4e-44 181.4 218 50.5
FAN22G1705 Fragaria x ananassa HOM05D006456 ORTHO05D007588 7.4e-44 181.4 221 48.9
CsaV3_5G034690 Cucumis sativus L. HOM05D006456 ORTHO05D007588 9.7e-44 181.0 226 48.7
HanXRQChr15g0477811 Helianthus annuus HOM05D006456 ORTHO05D007588 1.7e-43 180.3 221 50.7
FAN07G1047 Fragaria x ananassa HOM05D006456 ORTHO05D008764 2.2e-43 179.9 220 47.3
Aqoxy3G00186 Aquilegia oxysepala HOM05D006456 ORTHO05D007588 6.3e-43 178.3 214 46.7
BcaC08g45988 Brassica carinata HOM05D006456 ORTHO05D007588 1.1e-42 177.6 220 46.4
Atru.chr11.273 Acer truncatum HOM05D006456 ORTHO05D007588 1.4e-42 177.2 221 47.5
ECA246G1061 Erigeron canadensis HOM05D006456 ORTHO05D007588 1.4e-42 177.2 217 50.7
Carub.0002s1467 Capsella rubella HOM05D006456 ORTHO05D007588 4.1e-42 175.6 221 46.2
PSO017G1436 Papaver somniferum HOM05D006456 ORTHO05D007588 4.1e-42 175.6 221 48.4
HanXRQChr17g0556631 Helianthus annuus HOM05D006456 ORTHO05D007588 5.3e-42 175.3 222 49.1
TWI75G0343 Tripterygium wilfordii HOM05D006456 ORTHO05D007588 1.5e-41 173.7 220 45.0
Aa31sc140G50 Aethionema arabicum HOM05D006456 ORTHO05D007588 2.0e-41 173.3 217 45.6
Atru.chr11.288 Acer truncatum HOM05D006456 ORTHO05D007588 4.5e-41 172.2 223 47.5
Thhalv10019127m.g Eutrema salsugineum HOM05D006456 ORTHO05D007588 7.7e-41 171.4 219 44.7
AT1G68185 Arabidopsis thaliana HOM05D006456 ORTHO05D007588 1.0e-40 171.0 217 45.6
PSO478G4574 Papaver somniferum HOM05D006456 ORTHO05D007588 1.3e-40 170.6 223 47.5
SGA_v2.0_scaffold170G38812 Striga asiatica HOM05D006456 ORTHO05D007588 1.7e-40 170.2 240 43.3
AL2G27020 Arabidopsis lyrata HOM05D006456 ORTHO05D007588 2.9e-40 169.5 220 47.7
A07p32110 Brassica napus HOM05D006456 ORTHO05D007588 3.8e-40 169.1 216 44.9
PGR119G2311 Punica granatum HOM05D006456 ORTHO05D007588 5.0e-40 168.7 226 46.0
Hund25025 Selenicereus undatus HOM05D006456 ORTHO05D007588 5.0e-40 168.7 220 43.2
CARHR060870 Cardamine hirsuta HOM05D006456 ORTHO05D007588 8.5e-40 167.9 221 45.7
Peaxi162Scf00520g00114 Petunia axillaris HOM05D006456 ORTHO05D007588 1.4e-39 167.2 153 55.6
Ciclev10016584m.g Citrus clementina HOM05D006456 ORTHO05D007588 4.2e-39 165.6 226 44.7
Cc11_g09550 Coffea canephora HOM05D006456 ORTHO05D007588 4.2e-39 165.6 232 42.7
unitig_52.g17127 Utricularia gibba HOM05D006456 ORTHO05D007588 7.2e-39 164.9 226 42.9
BcaB03g15404 Brassica carinata HOM05D006456 ORTHO05D007588 1.2e-38 164.1 213 43.7
Potri.010G118900 Populus trichocarpa HOM05D006456 ORTHO05D007588 2.1e-38 163.3 220 47.7
CDE07G1334 Ceratophyllum demersum HOM05D006456 ORTHO05D007588 3.6e-38 162.5 221 44.8
MBI16_g14292_MAGBIO Magnolia biondii HOM05D006456 ORTHO05D007588 3.6e-38 162.5 219 44.3
Sc11g0003890 Simmondsia chinensis HOM05D006456 ORTHO05D007588 1.8e-37 160.2 267 37.5
PGSC0003DMG400010378 Solanum tuberosum HOM05D006456 ORTHO05D007588 2.3e-37 159.8 169 51.5
Cpa.g.sc65.75 Carica papaya HOM05D006456 ORTHO05D007588 5.2e-37 158.7 186 48.4
Sed0026587 Sechium edule HOM05D006456 ORTHO05D007588 3.7e-35 152.5 166 52.4
ATR0053G055 Amborella trichopoda HOM05D006456 ORTHO05D007588 1.8e-34 150.2 218 41.3
Sp5g23190 Schrenkiella parvula HOM05D006456 ORTHO05D007588 1.8e-34 150.2 236 40.7
THA.LOC104801669 Tarenaya hassleriana HOM05D006456 ORTHO05D007588 4.1e-34 149.1 221 40.7
RcHm_v2.0_Chr4g0434211 Rosa chinensis HOM05D006456 ORTHO05D007588 3.5e-33 146.0 215 46.5
Lj6P752T19 Lonicera japonica HOM05D006456 ORTHO05D007588 7.7e-33 144.8 125 60.0
AUR62002792 Chenopodium quinoa HOM05D006456 ORTHO05D007588 5.0e-32 142.1 230 41.3
EL10Ac6g14282 Beta vulgaris HOM05D006456 ORTHO05D007588 1.9e-31 140.2 220 41.8
Eucgr.G02230 Eucalyptus grandis HOM05D006456 ORTHO05D007588 5.5e-31 138.7 223 46.2
CsaV3_5G006740 Cucumis sativus L. HOM05D006456 ORTHO05D007588 1.6e-30 137.1 233 40.3
AUR62014103 Chenopodium quinoa HOM05D006456 ORTHO05D007588 2.7e-30 136.3 234 38.5
Migut.E00381 Erythranthe guttata HOM05D006456 ORTHO05D007588 3.0e-29 132.9 127 50.4
Ah.02g128170 Amaranthus hybridus HOM05D006456 ORTHO05D007588 4.0e-29 132.5 223 39.5
Nitab4.5_0012897g0010 Nicotiana tabacum HOM05D006456 ORTHO05D007588 6.7e-29 131.7 168 46.4
Os01g0607300 Oryza sativa ssp. japonica HOM05D006456 ORTHO05D007588 2.2e-27 126.7 227 34.8
Sabra10G0089400 Salix brachista HOM05D006456 ORTHO05D007588 3.5e-25 119.4 328 30.2
HanXRQChr17g0556611 Helianthus annuus HOM05D006456 ORTHO05D007588 4.5e-25 119.0 131 50.4
HPP92_004850 Vanilla planifolia HOM05D006456 ORTHO05D007588 1.7e-24 117.1 227 33.9
HPP92_004876 Vanilla planifolia HOM05D006456 ORTHO05D007588 2.9e-24 116.3 231 33.3
Zm00001eb357890 Zea mays HOM05D006456 ORTHO05D007588 6.1e-22 108.6 219 32.4
BolC6t38884H Brassica oleracea HOM05D006456 ORTHO05D007588 5.2e-21 105.5 122 46.7
BraA07t30839Z Brassica rapa HOM05D006456 ORTHO05D007588 8.8e-21 104.8 118 46.6
Pp3c14_19600 Physcomitrium patens HOM05D006456 ORTHO05D007588 4.5e-17 92.4 242 32.6
Pp3c2_12120 Physcomitrium patens HOM05D006456 ORTHO05D007588 3.2e-15 86.3 234 31.2
COL.COLO4_36793 Corchorus olitorius HOM05D006456 ORTHO05D007588 8.8e-13 78.2 56 62.5
Mapoly0066s0083 Marchantia polymorpha HOM05D006456 ORTHO05D007588 9.8e-12 74.7 231 30.3
BolC6t38885H Brassica oleracea HOM05D006456 ORTHO05D007588 1.3e-11 74.3 94 45.7
CDE06G0604 Ceratophyllum demersum HOM05D006456 ORTHO05D007588 2.8e-11 73.2 111 37.8
BraA07t30840Z Brassica rapa HOM05D006456 ORTHO05D007588 4.5e-09 65.9 89 43.8
Actinidia31998 Actinidia chinensis HOM05D006456 ORTHO05D007588 1.7e-08 63.9 77 44.2
SEGI_26799 Sequoiadendron giganteum HOM05D006456 ORTHO05D007588 4.7e-06 55.8 100 34.0


User provided reference genes

Program Settings