Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr17g0338681 Lupinus albus HOM05D007719 ORTHO05D009782 1.1e-231 806.2 404 100.0
Psat0s3407g0080 Pisum sativum HOM05D007719 ORTHO05D009782 3.7e-198 694.9 396 87.4
Medtr1g030640 Medicago truncatula HOM05D007719 ORTHO05D009782 4.1e-197 691.4 396 86.9
Ca_25710_v3 Cicer arietinum L. HOM05D007719 ORTHO05D009782 6.5e-195 684.1 405 85.9
TPR.G36961 Trifolium pratense HOM05D007719 ORTHO05D009782 1.1e-194 683.3 399 85.2
Glyma.09G119300 Glycine max HOM05D007719 ORTHO05D009782 8.8e-192 673.7 399 84.2
Lj2g0007830 Lotus japonicus HOM05D007719 ORTHO05D009782 2.6e-188 662.1 365 89.0
arahy.Tifrunner.gnm1.ann1.Y8VIVB Arachis hypogaea HOM05D007719 ORTHO05D009782 1.3e-187 659.8 402 82.1
VMungo1215G2618 Vigna mungo HOM05D007719 ORTHO05D009782 2.9e-187 658.7 403 83.4
Phvul.003G022800 Phaseolus vulgaris HOM05D007719 ORTHO05D009782 5.5e-186 654.4 398 82.7
QL01p001957 Quercus lobata HOM05D007719 ORTHO05D009782 2.4e-181 639.0 401 78.8
CiPaw.05G248600 Carya illinoinensis HOM05D007719 ORTHO05D009782 1.2e-180 636.7 383 82.2
Dinv05161 Davidia involucrata HOM05D007719 ORTHO05D009782 1.6e-180 636.3 393 81.2
FAN12G3181 Fragaria x ananassa HOM05D007719 ORTHO05D009782 1.9e-178 629.4 393 78.6
Gohir.A12G150300 Gossypium hirsutum HOM05D007719 ORTHO05D009782 1.9e-178 629.4 395 78.2
Gorai.008G166400 Gossypium raimondii HOM05D007719 ORTHO05D009782 1.9e-178 629.4 395 78.0
Atru.chr11.428 Acer truncatum HOM05D007719 ORTHO05D009782 3.2e-178 628.6 392 80.1
FvH4_4g32280 Fragaria vesca HOM05D007719 ORTHO05D009782 7.2e-178 627.5 390 79.2
Potri.010G114100 Populus trichocarpa HOM05D007719 ORTHO05D009782 2.1e-177 625.9 390 79.7
MD16G1029600 Malus domestica HOM05D007719 ORTHO05D009782 8.0e-177 624.0 382 81.7
TAR629G1042 Trochodendron aralioides HOM05D007719 ORTHO05D009782 1.8e-176 622.9 378 80.7
CSS0046068 Camellia sinensis var. sinensis HOM05D007719 ORTHO05D009782 3.0e-176 622.1 378 80.4
ClCG01G006100 Citrullus lanatus HOM05D007719 ORTHO05D009782 8.8e-176 620.5 381 78.5
vmacro10633 Vaccinium macrocarpon HOM05D007719 ORTHO05D009782 1.3e-174 616.7 407 75.7
FAN07G1524 Fragaria x ananassa HOM05D007719 ORTHO05D009782 1.7e-174 616.3 364 81.3
FAN22G2057 Fragaria x ananassa HOM05D007719 ORTHO05D009782 6.3e-174 614.4 390 77.9
arahy.Tifrunner.gnm1.ann1.L198GP Arachis hypogaea HOM05D007719 ORTHO05D009782 1.8e-173 612.8 402 77.9
TWI75G0056 Tripterygium wilfordii HOM05D007719 ORTHO05D009782 5.4e-173 611.3 378 79.6
COL.COLO4_20469 Corchorus olitorius HOM05D007719 ORTHO05D009782 1.2e-172 610.1 426 72.8
PGR119G0428 Punica granatum HOM05D007719 ORTHO05D009782 1.6e-172 609.8 382 78.0
Manes.15G114900 Manihot esculenta HOM05D007719 ORTHO05D009782 2.7e-172 609.0 358 83.2
Sed0008286 Sechium edule HOM05D007719 ORTHO05D009782 7.7e-172 607.4 376 78.7
CsaV3_5G028560 Cucumis sativus L. HOM05D007719 ORTHO05D009782 1.0e-171 607.1 404 74.0
Rhsim09G0099000 Rhododendron simsii HOM05D007719 ORTHO05D009782 1.0e-171 607.1 403 76.9
RcHm_v2.0_Chr4g0441071 Rosa chinensis HOM05D007719 ORTHO05D009782 5.5e-170 601.3 382 77.0
CAN.G1334.8 Capsicum annuum HOM05D007719 ORTHO05D009782 9.5e-170 600.5 403 74.9
EL10Ac3g06304 Beta vulgaris HOM05D007719 ORTHO05D009782 2.1e-169 599.4 403 73.4
Actinidia36679 Actinidia chinensis HOM05D007719 ORTHO05D009782 2.8e-169 599.0 378 77.5
Hund24987 Selenicereus undatus HOM05D007719 ORTHO05D009782 4.7e-169 598.2 402 74.1
ECA234G0976 Erigeron canadensis HOM05D007719 ORTHO05D009782 1.5e-167 593.2 378 76.5
AUR62002606 Chenopodium quinoa HOM05D007719 ORTHO05D009782 2.0e-167 592.8 384 74.2
Eucgr.G02196 Eucalyptus grandis HOM05D007719 ORTHO05D009782 2.0e-167 592.8 392 75.8
Sabra10G0084100 Salix brachista HOM05D007719 ORTHO05D009782 2.0e-167 592.8 420 71.2
FAN17G2178 Fragaria x ananassa HOM05D007719 ORTHO05D009782 4.4e-167 591.7 355 80.3
AUR62030024 Chenopodium quinoa HOM05D007719 ORTHO05D009782 8.3e-166 587.4 375 75.7
Sopen05g004110 Solanum pennellii HOM05D007719 ORTHO05D009782 8.3e-166 587.4 400 74.0
Cc11_g08840 Coffea canephora HOM05D007719 ORTHO05D009782 1.4e-165 586.6 393 74.3
Lsat_1_v5_gn_4_14941 Lactuca sativa HOM05D007719 ORTHO05D009782 2.4e-165 585.9 386 74.4
Sc11g0004120 Simmondsia chinensis HOM05D007719 ORTHO05D009782 5.9e-164 581.3 377 76.9
Solyc05g008270.3 Solanum lycopersicum HOM05D007719 ORTHO05D009782 5.9e-164 581.3 379 76.5
HanXRQChr17g0566951 Helianthus annuus HOM05D007719 ORTHO05D009782 2.3e-163 579.3 378 75.9
PGSC0003DMG400030550 Solanum tuberosum HOM05D007719 ORTHO05D009782 1.5e-162 576.6 411 71.5
DCAR_030215 Daucus carota HOM05D007719 ORTHO05D009782 2.5e-162 575.9 358 77.7
Ah.07g204110 Amaranthus hybridus HOM05D007719 ORTHO05D009782 5.6e-162 574.7 422 69.7
MSTRG.23215 Avicennia marina HOM05D007719 ORTHO05D009782 9.5e-162 573.9 408 71.8
Oeu034423.3 Olea europaea HOM05D007719 ORTHO05D009782 1.4e-160 570.1 407 70.8
Nitab4.5_0004776g0060 Nicotiana tabacum HOM05D007719 ORTHO05D009782 3.0e-160 568.9 352 78.4
ATR0686G226 Amborella trichopoda HOM05D007719 ORTHO05D009782 2.6e-159 565.8 374 73.5
Prupe.1G323300 Prunus persica HOM05D007719 ORTHO05D009782 5.0e-155 551.6 343 81.0
SEGI_18275 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 3.3e-154 548.9 380 70.8
Os01g0127400 Oryza sativa ssp. japonica HOM05D007719 ORTHO05D009782 7.3e-154 547.7 361 73.7
SGA_v2.0_scaffold25G10737 Striga asiatica HOM05D007719 ORTHO05D009782 1.6e-153 546.6 416 68.8
SalBow5G1767 Salvia bowleyana HOM05D007719 ORTHO05D009782 2.3e-152 542.7 373 75.6
HPP92_021852 Vanilla planifolia HOM05D007719 ORTHO05D009782 1.2e-151 540.4 370 70.0
Migut.O00274 Erythranthe guttata HOM05D007719 ORTHO05D009782 2.9e-150 535.8 373 73.2
Peaxi162Scf00205g00122 Petunia axillaris HOM05D007719 ORTHO05D009782 9.2e-149 530.8 399 69.7
unitig_61.g26194 Utricularia gibba HOM05D007719 ORTHO05D009782 1.3e-147 526.9 352 73.3
Mapoly0070s0076 Marchantia polymorpha HOM05D007719 ORTHO05D009782 3.1e-144 515.8 360 68.3
Pp3c1_3200 Physcomitrium patens HOM05D007719 ORTHO05D009782 1.2e-143 513.8 369 67.8
MELO3C005317.2 Cucumis melo HOM05D007719 ORTHO05D009782 3.4e-143 512.3 399 66.4
SMO236G0033 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 1.8e-136 490.0 364 65.1
SMO236G0110 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 1.8e-136 490.0 364 65.1
GSVIVG01011772001 Vitis vinifera HOM05D007719 ORTHO05D009782 1.8e-136 490.0 300 81.7
Actinidia15254 Actinidia chinensis HOM05D007719 ORTHO05D009782 6.4e-134 481.5 409 63.1
CDE04G3405 Ceratophyllum demersum HOM05D007719 ORTHO05D009782 1.6e-129 466.8 364 66.5
Zm00001eb125300 Zea mays HOM05D007719 ORTHO05D009782 5.6e-122 441.8 392 58.9
Thecc.02G280000 Theobroma cacao HOM05D007719 ORTHO05D009782 2.5e-114 416.4 260 80.0
Gohir.D12G153900 Gossypium hirsutum HOM05D007719 ORTHO05D009782 2.1e-113 413.3 262 77.9
Cpa.g.sc65.124 Carica papaya HOM05D007719 ORTHO05D009782 9.0e-112 407.9 250 80.0
SMO187G0003 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 8.4e-110 401.4 364 56.0
Haze_11019 Corylus avellana HOM05D007719 ORTHO05D009782 2.5e-106 389.8 300 71.0
AagrBONN_evm.TU.Sc2ySwM_228.3777 Anthoceros agrestis HOM05D007719 ORTHO05D009782 1.8e-96 357.1 273 65.9
Cfa008596 Carpinus fangiana HOM05D007719 ORTHO05D009782 3.8e-94 349.4 242 76.0
SEGI_23314 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 7.4e-90 335.1 250 67.2
Nn4g24120 Nelumbo nucifera HOM05D007719 ORTHO05D009782 1.5e-82 310.8 174 86.2
CBR_g12440 Chara braunii HOM05D007719 ORTHO05D009782 1.3e-78 297.7 351 45.3
Duzib268G0649 Durio zibethinus HOM05D007719 ORTHO05D009782 1.6e-68 264.2 237 60.8
GSVIVG01011775001 Vitis vinifera HOM05D007719 ORTHO05D009782 9.1e-64 248.4 145 84.1
Cfa008597 Carpinus fangiana HOM05D007719 ORTHO05D009782 5.5e-53 212.6 138 73.2
Haze_11018 Corylus avellana HOM05D007719 ORTHO05D009782 3.6e-52 209.9 135 73.3
TPR.G29132 Trifolium pratense HOM05D007719 ORTHO05D009782 1.2e-12 78.6 77 58.4


User provided reference genes

Program Settings