Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr17g0338591 Lupinus albus HOM05D005158 ORTHO05D005510 3.3e-256 887.9 455 100.0
Phvul.003G032200 Phaseolus vulgaris HOM05D005158 ORTHO05D005510 1.1e-155 553.9 456 66.2
Ciclev10015117m.g Citrus clementina HOM05D005158 ORTHO05D005510 6.9e-145 518.1 438 62.1
QL03p033448 Quercus lobata HOM05D005158 ORTHO05D005510 2.0e-144 516.5 447 63.1
Actinidia36249 Actinidia chinensis HOM05D005158 ORTHO05D005510 1.0e-143 514.2 354 71.2
Lj2g0016958 Lotus japonicus HOM05D005158 ORTHO05D005510 5.0e-143 511.9 447 64.0
RcHm_v2.0_Chr4g0441611 Rosa chinensis HOM05D005158 ORTHO05D005510 5.5e-142 508.4 447 61.7
Duzib251G0375 Durio zibethinus HOM05D005158 ORTHO05D005510 2.1e-141 506.5 452 60.6
Manes.17G078700 Manihot esculenta HOM05D005158 ORTHO05D005510 3.6e-141 505.8 353 71.7
CSS0029988 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 1.0e-140 504.2 354 71.8
Prupe.1G327200 Prunus persica HOM05D005158 ORTHO05D005510 3.0e-140 502.7 454 61.0
Potri.010G111100 Populus trichocarpa HOM05D005158 ORTHO05D005510 6.7e-140 501.5 440 59.8
Sabra10G0081500 Salix brachista HOM05D005158 ORTHO05D005510 3.3e-139 499.2 441 60.3
TAR374G1701 Trochodendron aralioides HOM05D005158 ORTHO05D005510 5.7e-139 498.4 441 61.5
COL.COLO4_13149 Corchorus olitorius HOM05D005158 ORTHO05D005510 3.7e-138 495.7 359 70.2
GSVIVG01011734001 Vitis vinifera HOM05D005158 ORTHO05D005510 3.7e-138 495.7 358 70.4
HanXRQChr08g0212241 Helianthus annuus HOM05D005158 ORTHO05D005510 4.8e-138 495.4 368 67.4
FvH4_4g32690 Fragaria vesca HOM05D005158 ORTHO05D005510 1.8e-137 493.4 351 70.9
FAN12G3950 Fragaria x ananassa HOM05D005158 ORTHO05D005510 9.1e-137 491.1 351 70.7
MD16G1026300 Malus domestica HOM05D005158 ORTHO05D005510 1.2e-136 490.7 355 70.4
FAN17G2123 Fragaria x ananassa HOM05D005158 ORTHO05D005510 5.9e-136 488.4 350 70.0
CANSAT64G2776 Cannabis sativa HOM05D005158 ORTHO05D005510 1.7e-135 486.9 463 57.9
Nn4g24217 Nelumbo nucifera HOM05D005158 ORTHO05D005510 4.7e-133 478.8 360 66.1
vmacro00408 Vaccinium macrocarpon HOM05D005158 ORTHO05D005510 2.3e-132 476.5 529 52.7
Cc11_g08400 Coffea canephora HOM05D005158 ORTHO05D005510 3.0e-132 476.1 420 59.8
Dinv28033 Davidia involucrata HOM05D005158 ORTHO05D005510 4.0e-132 475.7 312 75.0
Migut.L00352 Erythranthe guttata HOM05D005158 ORTHO05D005510 4.0e-132 475.7 460 57.0
Lsat_1_v5_gn_8_45001 Lactuca sativa HOM05D005158 ORTHO05D005510 6.7e-132 474.9 361 66.5
CiPaw.05G195800 Carya illinoinensis HOM05D005158 ORTHO05D005510 2.6e-131 473.0 424 59.9
SalBow8G1650 Salvia bowleyana HOM05D005158 ORTHO05D005510 5.7e-131 471.9 458 56.8
PGR119G0382 Punica granatum HOM05D005158 ORTHO05D005510 9.7e-131 471.1 357 65.0
Haze_10977 Corylus avellana HOM05D005158 ORTHO05D005510 1.7e-130 470.3 517 51.5
SalBow8G5629 Salvia bowleyana HOM05D005158 ORTHO05D005510 2.8e-130 469.5 458 56.3
Cc11_g08410 Coffea canephora HOM05D005158 ORTHO05D005510 6.3e-130 468.4 439 57.9
Sc14g0007050 Simmondsia chinensis HOM05D005158 ORTHO05D005510 8.2e-130 468.0 354 67.2
PSO478G5200 Papaver somniferum HOM05D005158 ORTHO05D005510 1.8e-129 466.8 365 64.7
MSTRG.13599 Avicennia marina HOM05D005158 ORTHO05D005510 2.4e-129 466.5 319 72.1
Sc14g0006290 Simmondsia chinensis HOM05D005158 ORTHO05D005510 2.4e-129 466.5 433 58.7
Eucgr.G02179 Eucalyptus grandis HOM05D005158 ORTHO05D005510 7.0e-129 464.9 383 62.7
PSO017G1154 Papaver somniferum HOM05D005158 ORTHO05D005510 7.0e-129 464.9 365 64.1
Cfa008628 Carpinus fangiana HOM05D005158 ORTHO05D005510 9.1e-129 464.5 401 61.6
Dinv27619 Davidia involucrata HOM05D005158 ORTHO05D005510 4.5e-128 462.2 355 64.2
GSVIVG01008427001 Vitis vinifera HOM05D005158 ORTHO05D005510 7.7e-128 461.5 464 54.1
FAN04G1228 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.7e-127 460.3 433 56.4
CsaV3_5G015040 Cucumis sativus L. HOM05D005158 ORTHO05D005510 5.0e-127 458.8 363 62.8
QL10p028515 Quercus lobata HOM05D005158 ORTHO05D005510 5.0e-127 458.8 357 64.4
MELO3C014995.2 Cucumis melo HOM05D005158 ORTHO05D005510 6.5e-127 458.4 363 62.3
Thecc.03G054800 Theobroma cacao HOM05D005158 ORTHO05D005510 6.5e-127 458.4 437 57.4
COL.COLO4_37683 Corchorus olitorius HOM05D000282 ORTHO05D005510 2.5e-126 456.4 427 56.2
Aqoxy3G00071 Aquilegia oxysepala HOM05D005158 ORTHO05D005510 5.5e-126 455.3 360 64.2
RcHm_v2.0_Chr7g0178481 Rosa chinensis HOM05D005158 ORTHO05D005510 5.5e-126 455.3 351 63.2
MD06G1226600 Malus domestica HOM05D005158 ORTHO05D005510 7.2e-126 454.9 360 62.8
ClCG07G007220 Citrullus lanatus HOM05D005158 ORTHO05D005510 1.2e-125 454.1 363 63.4
Sopen05g014580 Solanum pennellii HOM05D005158 ORTHO05D005510 3.6e-125 452.6 427 56.4
Carub.0002s1765 Capsella rubella HOM05D005158 ORTHO05D005510 1.4e-124 450.7 356 63.5
FvH4_5g17290 Fragaria vesca HOM05D005158 ORTHO05D005510 2.3e-124 449.9 357 63.3
CiPaw.15G143000 Carya illinoinensis HOM05D005158 ORTHO05D005510 4.0e-124 449.1 365 63.3
SGA_v2.0_scaffold234G43623 Striga asiatica HOM05D005158 ORTHO05D005510 8.8e-124 448.0 388 60.1
VMungo1215G0718 Vigna mungo HOM05D005158 ORTHO05D005510 1.2e-123 447.6 524 50.0
CSS0001942 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 1.5e-123 447.2 317 71.3
Ciclev10008271m.g Citrus clementina HOM05D005158 ORTHO05D005510 1.5e-123 447.2 353 64.0
CAN.G236.18 Capsicum annuum HOM05D005158 ORTHO05D005510 3.4e-123 446.0 409 57.2
FAN22G1395 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.3e-122 444.1 350 65.7
HanXRQChr08g0212251 Helianthus annuus HOM05D005158 ORTHO05D005510 1.7e-122 443.7 445 53.9
Sabra15G0037900 Salix brachista HOM05D005158 ORTHO05D005510 2.2e-122 443.4 363 60.3
CSS0029687 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 2.8e-122 443.0 340 64.4
Haze_18844 Corylus avellana HOM05D005158 ORTHO05D005510 4.8e-122 442.2 405 57.5
Sed0000270 Sechium edule HOM05D005158 ORTHO05D005510 2.4e-121 439.9 431 55.2
FvH4_5g11940 Fragaria vesca HOM05D005158 ORTHO05D005510 3.1e-121 439.5 336 65.5
FAN13G1699 Fragaria x ananassa HOM05D005158 ORTHO05D005510 5.4e-121 438.7 367 62.4
Duzib205G1388 Durio zibethinus HOM05D005158 ORTHO05D005510 1.0e-119 434.5 432 54.2
FAN18G4517 Fragaria x ananassa HOM05D005158 ORTHO05D005510 6.5e-119 431.8 344 64.0
CDE05G1850 Ceratophyllum demersum HOM05D005158 ORTHO05D005510 7.2e-118 428.3 409 56.7
FAN18G3280 Fragaria x ananassa HOM05D005158 ORTHO05D005510 7.2e-118 428.3 353 62.3
TWI75G0580 Tripterygium wilfordii HOM05D005158 ORTHO05D005510 7.2e-118 428.3 387 58.9
ATR0665G468 Amborella trichopoda HOM05D005158 ORTHO05D005510 4.7e-117 425.6 412 55.1
MSTRG.4576 Avicennia marina HOM05D005158 ORTHO05D005510 4.7e-117 425.6 357 59.1
Migut.D01553 Erythranthe guttata HOM05D005158 ORTHO05D005510 1.0e-116 424.5 360 56.7
FAN08G3331 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.8e-116 423.7 329 66.3
Atru.chr9.1740 Acer truncatum HOM05D005158 ORTHO05D005510 2.3e-116 423.3 329 65.3
FAN18G0401 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.3e-116 423.3 300 66.3
ECA233G1067 Erigeron canadensis HOM05D005158 ORTHO05D005510 2.6e-115 419.9 320 66.6
Oeu046166.1 Olea europaea HOM05D005158 ORTHO05D005510 3.7e-114 416.0 354 57.3
Cc04_g06310 Coffea canephora HOM05D005158 ORTHO05D005510 6.3e-114 415.2 365 57.3
Lj6A744G51 Lonicera japonica HOM05D005158 ORTHO05D005510 3.1e-113 412.9 314 67.5
AUR62014187 Chenopodium quinoa HOM05D005158 ORTHO05D005510 3.5e-112 409.5 417 51.8
Ah.02g127790 Amaranthus hybridus HOM05D005158 ORTHO05D005510 4.0e-108 396.0 318 61.6
SalBow1G1317 Salvia bowleyana HOM05D005158 ORTHO05D005510 9.8e-107 391.3 294 63.3
Os03g0707200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 1.7e-106 390.6 294 62.9
CSS0046275 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 3.9e-103 379.4 324 59.6
Rhsim09G0065800 Rhododendron simsii HOM05D005158 ORTHO05D005510 2.8e-101 373.2 348 58.3
Rhsim09G0065900 Rhododendron simsii HOM05D005158 ORTHO05D005510 4.7e-101 372.5 347 58.5
Hund20682 Selenicereus undatus HOM05D005158 ORTHO05D005510 2.9e-98 363.2 254 67.7
AUR62039517 Chenopodium quinoa HOM05D005158 ORTHO05D005510 6.4e-98 362.1 472 44.3
FAN13G2578 Fragaria x ananassa HOM05D005158 ORTHO05D005510 3.0e-95 353.2 367 54.2
Peaxi162Scf00159g01112 Petunia axillaris HOM05D005158 ORTHO05D005510 8.3e-90 335.1 341 52.2
Dinv14415 Davidia involucrata HOM05D005158 ORTHO05D005510 6.8e-84 315.5 363 51.8
HPP92_016306 Vanilla planifolia HOM05D005158 ORTHO05D005510 2.4e-81 307.0 313 54.6
Prupe.5G232900 Prunus persica HOM05D005158 ORTHO05D005510 6.0e-80 302.4 235 64.3
Solyc05g017900.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 1.6e-77 294.3 301 53.8
Pp3c5_19920 Physcomitrium patens HOM05D005158 ORTHO05D005510 1.2e-72 278.1 295 44.7
Thecc.02G284700 Theobroma cacao HOM05D005158 ORTHO05D005510 2.8e-69 266.9 207 65.7
HPP92_016287 Vanilla planifolia HOM05D005158 ORTHO05D005510 4.0e-68 263.1 237 55.3
AUR62014186 Chenopodium quinoa HOM05D005158 ORTHO05D005510 1.9e-65 254.2 275 49.5
Zm00001eb054470 Zea mays HOM05D005158 ORTHO05D005510 6.7e-63 245.7 191 62.3
Potri.008G130950 Populus trichocarpa HOM05D005158 ORTHO05D005510 1.5e-62 244.6 281 50.5
FAN07G0555 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.5e-59 234.6 251 53.8
Oeu003374.1 Olea europaea HOM05D005158 ORTHO05D005510 5.8e-59 232.6 171 67.8
PRCOL_00003969 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 6.7e-55 219.2 307 40.7
SEGI_17459 Sequoiadendron giganteum HOM05D005158 ORTHO05D005510 8.7e-55 218.8 185 58.9
Oeu014055.2 Olea europaea HOM05D005158 ORTHO05D005510 1.5e-54 218.0 172 65.7
AagrBONN_evm.TU.Sc2ySwM_344.3657 Anthoceros agrestis HOM05D005158 ORTHO05D005510 1.4e-49 201.4 251 41.0
Cpa.g.sc570.2 Carica papaya HOM05D005158 ORTHO05D005510 3.1e-44 183.7 122 71.3
Manes.06G007150 Manihot esculenta HOM05D005158 ORTHO05D005510 5.1e-39 166.4 195 50.3
Zm00001eb280420 Zea mays HOM05D005158 ORTHO05D005510 1.5e-35 154.8 145 54.5
HanXRQChr08g0212291 Helianthus annuus HOM05D005158 ORTHO05D005510 7.7e-35 152.5 111 65.8
HPP92_027195 Vanilla planifolia HOM05D005158 ORTHO05D005510 7.7e-35 152.5 186 45.7
Os06g0269200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 1.4e-28 131.7 90 65.6
TAR622G0559 Trochodendron aralioides HOM05D005158 ORTHO05D005510 3.1e-28 130.6 230 38.7
Duzib068G0898 Durio zibethinus HOM05D005158 ORTHO05D005510 5.3e-28 129.8 256 35.9
Gohir.D02G122150 Gossypium hirsutum HOM05D005158 ORTHO05D005510 8.5e-26 122.5 198 42.9
DCAR_007307 Daucus carota HOM05D005158 ORTHO05D005510 4.7e-24 116.7 98 64.3
Thecc.02G284900 Theobroma cacao HOM05D005158 ORTHO05D005510 4.7e-24 116.7 189 45.5
PRCOL_00000423 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 1.4e-23 115.2 250 33.6
AagrBONN_evm.TU.Sc2ySwM_368.719 Anthoceros agrestis HOM05D005158 ORTHO05D005510 1.8e-23 114.8 326 28.5
PGR044G0956 Punica granatum HOM05D005158 ORTHO05D005510 1.8e-23 114.8 196 37.2
Solyc05g017940.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 3.9e-23 113.6 104 57.7
MD16G1025900 Malus domestica HOM05D005158 ORTHO05D005510 1.5e-22 111.7 76 72.4
Peaxi162Scf00159g01110 Petunia axillaris HOM05D005158 ORTHO05D005510 5.7e-22 109.8 103 56.3
Prupe.5G232800 Prunus persica HOM05D005158 ORTHO05D005510 1.3e-21 108.6 203 37.9
Gorai.005G131900 Gossypium raimondii HOM05D005158 ORTHO05D005510 1.7e-21 108.2 144 46.5
Mapoly0003s0267 Marchantia polymorpha HOM05D032652 ORTHO05D005510 2.4e-20 104.4 332 26.8
C06p44960 Brassica napus HOM05D005158 ORTHO05D005510 3.1e-20 104.0 107 54.2
MCO07G148 Micromonas commoda HOM05D005158 ORTHO05D005510 3.5e-19 100.5 184 31.5
HanXRQChr08g0212271 Helianthus annuus HOM05D005158 ORTHO05D005510 4.5e-19 100.1 63 76.2
AagrBONN_evm.TU.Sc2ySwM_117.460 Anthoceros agrestis HOM05D005158 ORTHO05D005510 1.2e-14 85.5 251 29.1
Manes.09G075257 Manihot esculenta HOM05D005158 ORTHO05D005510 1.2e-14 85.5 59 71.2
Cpa.g.sc130.33 Carica papaya HOM05D005158 ORTHO05D005510 7.5e-14 82.8 62 64.5
MCO07G404 Micromonas commoda HOM05D005158 ORTHO05D005510 1.4e-12 78.6 248 23.8
Pp3c15_24210 Physcomitrium patens HOM05D005158 ORTHO05D005510 9.1e-12 75.9 260 28.1
MCO04G437 Micromonas commoda HOM05D005158 ORTHO05D005510 2.0e-11 74.7 321 26.5
RcHm_v2.0_Chr7g0199801 Rosa chinensis HOM05D005158 ORTHO05D005510 7.2e-09 66.2 56 51.8
Aqoxy2G01678 Aquilegia oxysepala HOM05D005158 ORTHO05D005510 8.0e-08 62.8 62 46.8
MCO15G091 Micromonas commoda HOM05D036318 ORTHO05D005510 8.8e-07 59.3 352 23.6
VMungo1215G0171 Vigna mungo HOM05D005158 ORTHO05D005510 7.5e-06 56.2 57 52.6


User provided reference genes

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