Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr17g0337841 Lupinus albus HOM05D000200 ORTHO05D000262 2.7e-21 104.4 51 100.0
Lalb_Chr10g0094981 Lupinus albus HOM05D000200 ORTHO05D000262 6.0e-13 76.6 45 82.2
Glyma.09G282500 Glycine max HOM05D000200 ORTHO05D000262 2.6e-08 61.2 45 66.7
TPR.G29774 Trifolium pratense HOM05D000200 ORTHO05D000262 5.8e-08 60.1 45 66.7
Lj2g0016818 Lotus japonicus HOM05D000200 ORTHO05D000262 7.6e-08 59.7 45 68.9
Medtr1g037500 Medicago truncatula HOM05D000200 ORTHO05D000262 9.9e-08 59.3 46 60.9
Medtr1g037490 Medicago truncatula HOM05D000200 ORTHO05D000262 1.3e-07 58.9 45 62.2
Ciclev10004144m.g Citrus clementina HOM05D000200 ORTHO05D000262 1.7e-07 58.5 46 65.2
COL.COLO4_07145 Corchorus olitorius HOM05D000200 ORTHO05D000262 2.2e-07 58.2 44 63.6
Haze_11517 Corylus avellana HOM05D000200 ORTHO05D000262 6.4e-07 56.6 46 63.0
Haze_11523 Corylus avellana HOM05D000200 ORTHO05D000262 6.4e-07 56.6 46 63.0
Ca_26187_v3 Cicer arietinum L. HOM05D000200 ORTHO05D000262 8.4e-07 56.2 45 62.2
Thecc.04G218500 Theobroma cacao HOM05D000200 ORTHO05D000262 1.1e-06 55.8 46 60.9
Glyma.20G002900 Glycine max HOM05D000200 ORTHO05D000262 1.4e-06 55.5 46 65.2
arahy.Tifrunner.gnm1.ann1.SIZ9QD Arachis hypogaea HOM05D000200 ORTHO05D000262 1.9e-06 55.1 47 63.8
arahy.Tifrunner.gnm1.ann1.TWF35X Arachis hypogaea HOM05D000200 ORTHO05D000262 1.9e-06 55.1 47 63.8
Lj3C630G10 Lonicera japonica HOM05D000200 ORTHO05D000262 1.9e-06 55.1 46 63.0
MD16G1232500 Malus domestica HOM05D000200 ORTHO05D000262 1.9e-06 55.1 48 56.2
VMungo0251G2290 Vigna mungo HOM05D000200 ORTHO05D000262 1.9e-06 55.1 46 65.2
CSS0028794 Camellia sinensis var. sinensis HOM05D000200 ORTHO05D000262 2.4e-06 54.7 46 58.7
CiPaw.01G174700 Carya illinoinensis HOM05D000200 ORTHO05D000262 4.2e-06 53.9 46 58.7
Dinv29779 Davidia involucrata HOM05D000200 ORTHO05D000262 4.2e-06 53.9 46 58.7
MELO3C006360.2 Cucumis melo HOM05D000200 ORTHO05D000262 5.4e-06 53.5 46 58.7
CsaV3_3G011500 Cucumis sativus L. HOM05D000200 ORTHO05D000262 5.4e-06 53.5 46 58.7
Dinv27140 Davidia involucrata HOM05D000200 ORTHO05D000262 5.4e-06 53.5 46 58.7
Peaxi162Scf00043g00132 Petunia axillaris HOM05D000200 ORTHO05D000262 5.4e-06 53.5 46 58.7
QL09p043019 Quercus lobata HOM05D000200 ORTHO05D000262 5.4e-06 53.5 46 58.7
Oeu008821.2 Olea europaea HOM05D000200 ORTHO05D000262 7.1e-06 53.1 46 56.5
CAN.G260.1 Capsicum annuum HOM05D000200 ORTHO05D000262 9.3e-06 52.8 46 58.7
Solyc09g064200.4 Solanum lycopersicum HOM05D000200 ORTHO05D000262 9.3e-06 52.8 46 58.7
Sopen09g025420 Solanum pennellii HOM05D000200 ORTHO05D000262 9.3e-06 52.8 46 58.7
PGSC0003DMG400022027 Solanum tuberosum HOM05D000200 ORTHO05D000262 9.3e-06 52.8 46 58.7


User provided reference genes

Program Settings