Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr17g0337231 Lupinus albus HOM05D007678 ORTHO05D009658 3.3e-136 488.4 258 100.0
Glyma.09G240200 Glycine max HOM05D007678 ORTHO05D009658 9.2e-94 347.4 259 74.9
Medtr7g009670 Medicago truncatula HOM05D007678 ORTHO05D009658 6.0e-93 344.7 260 73.1
Psat3g196520 Pisum sativum HOM05D007678 ORTHO05D009658 1.5e-91 340.1 230 77.4
Lj1g0010481 Lotus japonicus HOM05D007678 ORTHO05D009658 1.2e-88 330.5 214 79.9
Ca_04109_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 2.0e-88 329.7 222 77.5
Ca_04118_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 2.0e-88 329.7 222 77.5
Prupe.2G048500 Prunus persica HOM05D007678 ORTHO05D009658 5.8e-80 301.6 212 74.1
Atru.chr2.1713_Atru.chr2.1714 Acer truncatum HOM05D007678 ORTHO05D009658 2.2e-79 299.7 221 71.0
QL04p021923 Quercus lobata HOM05D007678 ORTHO05D009658 8.4e-79 297.7 209 74.2
arahy.Tifrunner.gnm1.ann1.EB95VJ Arachis hypogaea HOM05D007678 ORTHO05D009658 1.1e-78 297.4 238 68.9
MD02G1272300 Malus domestica HOM05D007678 ORTHO05D009658 4.2e-78 295.4 212 72.2
Haze_02966 Corylus avellana HOM05D007678 ORTHO05D009658 5.4e-78 295.0 262 63.7
FvH4_7g04260 Fragaria vesca HOM05D007678 ORTHO05D009658 2.1e-77 293.1 255 65.5
Actinidia01693 Actinidia chinensis HOM05D007678 ORTHO05D009658 1.0e-76 290.8 238 66.4
FAN10G0661 Fragaria x ananassa HOM05D007678 ORTHO05D009658 8.7e-76 287.7 255 64.3
RcHm_v2.0_Chr1g0328821 Rosa chinensis HOM05D007678 ORTHO05D009658 8.7e-76 287.7 218 69.3
Potri.001G033500 Populus trichocarpa HOM05D007678 ORTHO05D009658 3.3e-75 285.8 243 65.8
Dinv31528 Davidia involucrata HOM05D007678 ORTHO05D009658 5.6e-75 285.0 216 68.5
Nn7g37012 Nelumbo nucifera HOM05D007678 ORTHO05D009658 5.6e-75 285.0 256 59.8
TAR623G0324 Trochodendron aralioides HOM05D007678 ORTHO05D009658 2.1e-74 283.1 230 66.1
Duzib106G1843 Durio zibethinus HOM05D007678 ORTHO05D009658 9.0e-73 277.7 246 63.8
ECA248G0545 Erigeron canadensis HOM05D007678 ORTHO05D009658 2.6e-72 276.2 211 68.7
TWI38G1059 Tripterygium wilfordii HOM05D007678 ORTHO05D009658 1.7e-71 273.5 235 63.0
Sed0019894 Sechium edule HOM05D000001 ORTHO05D000003 2.2e-71 273.1 249 60.2
Thecc.10G137600 Theobroma cacao HOM05D007678 ORTHO05D009658 4.9e-71 271.9 253 60.1
Manes.04G155050 Manihot esculenta HOM05D007678 ORTHO05D009658 1.4e-70 270.4 297 54.9
Glyma.18G256300 Glycine max HOM05D007678 ORTHO05D009658 2.4e-70 269.6 282 60.3
Gohir.D10G198600 Gossypium hirsutum HOM05D007678 ORTHO05D009658 9.3e-70 267.7 210 66.7
QL04p022035 Quercus lobata HOM05D007678 ORTHO05D009658 1.2e-69 267.3 189 73.0
HanXRQChr12g0376111 Helianthus annuus HOM05D007678 ORTHO05D009658 2.1e-69 266.5 227 65.6
PGSC0003DMG401028118 Solanum tuberosum HOM05D007678 ORTHO05D009658 6.0e-69 265.0 237 60.3
Gorai.011G222500 Gossypium raimondii HOM05D007678 ORTHO05D009658 7.9e-69 264.6 210 65.7
Lsat_1_v5_gn_7_114920 Lactuca sativa HOM05D007678 ORTHO05D009658 1.0e-68 264.2 269 58.7
Solyc10g081280.2 Solanum lycopersicum HOM05D007678 ORTHO05D009658 1.3e-68 263.8 219 63.5
Sopen10g031780 Solanum pennellii HOM05D007678 ORTHO05D009658 2.3e-68 263.1 222 62.2
MELO3C034052.2 Cucumis melo HOM05D007678 ORTHO05D009658 8.7e-68 261.2 211 65.9
Sabra01G0023800 Salix brachista HOM05D007678 ORTHO05D009658 4.3e-67 258.8 264 58.3
Ah.12g064780 Amaranthus hybridus HOM05D007678 ORTHO05D009658 1.6e-66 256.9 215 62.8
SalBow6G2419 Salvia bowleyana HOM05D007678 ORTHO05D009658 4.8e-66 255.4 210 63.8
ATR0307G037 Amborella trichopoda HOM05D007678 ORTHO05D009658 1.4e-65 253.8 217 60.4
DCAR_001914 Daucus carota HOM05D007678 ORTHO05D009658 1.4e-65 253.8 211 63.5
Eucgr.G03196 Eucalyptus grandis HOM05D007678 ORTHO05D009658 1.8e-65 253.4 217 62.7
MBI13_g30074_MAGBIO Magnolia biondii HOM05D007678 ORTHO05D009658 3.1e-65 252.7 243 59.3
Oeu044217.3 Olea europaea HOM05D007678 ORTHO05D009658 5.3e-65 251.9 258 55.4
Sc10g0003150 Simmondsia chinensis HOM05D007678 ORTHO05D009658 2.6e-64 249.6 230 59.6
COL.COLO4_04659 Corchorus olitorius HOM05D007678 ORTHO05D009658 7.6e-64 248.1 238 58.8
Migut.J01589 Erythranthe guttata HOM05D007678 ORTHO05D009658 9.9e-64 247.7 213 60.1
FAN06G1516 Fragaria x ananassa HOM05D007678 ORTHO05D009658 2.9e-63 246.1 284 55.6
unitig_37.g12769 Utricularia gibba HOM05D007678 ORTHO05D009658 2.9e-63 246.1 211 60.7
Peaxi162Scf00153g00057 Petunia axillaris HOM05D007678 ORTHO05D009658 2.1e-61 240.0 193 64.8
Gohir.A10G190900 Gossypium hirsutum HOM05D007678 ORTHO05D009658 4.6e-61 238.8 193 64.8
PGR031G1114 Punica granatum HOM05D007678 ORTHO05D009658 1.3e-60 237.3 217 59.4
EL10Ac2g02701 Beta vulgaris HOM05D007678 ORTHO05D009658 6.7e-60 235.0 249 56.6
VMungo1383G0210 Vigna mungo HOM05D000430 ORTHO05D009658 1.1e-59 234.2 157 75.8
Hund13420 Selenicereus undatus HOM05D007678 ORTHO05D009658 1.9e-59 233.4 237 57.4
CAN.G128.118 Capsicum annuum HOM05D001269 ORTHO05D001083 2.1e-58 229.9 189 64.0
CiPaw.14G011000 Carya illinoinensis HOM05D007678 ORTHO05D009658 1.1e-57 227.6 189 64.6
Nitab4.5_0008005g0010 Nicotiana tabacum HOM05D007678 ORTHO05D009658 5.3e-57 225.3 182 63.7
vmacro20847 Vaccinium macrocarpon HOM05D007678 ORTHO05D009658 5.3e-57 225.3 272 51.5
CsaV3_5G029470 Cucumis sativus L. HOM05D007678 ORTHO05D000003 1.2e-56 224.2 169 69.8
CDE09G0612 Ceratophyllum demersum HOM05D007678 ORTHO05D009658 1.3e-55 220.7 190 60.5
HPP92_018248 Vanilla planifolia HOM05D007678 ORTHO05D009658 2.5e-54 216.5 207 53.6
Nitab4.5_0000062g0570 Nicotiana tabacum HOM05D007678 ORTHO05D009658 3.2e-54 216.1 191 61.3
AUR62031676 Chenopodium quinoa HOM05D007678 ORTHO05D009658 9.3e-54 214.5 167 66.5
arahy.Tifrunner.gnm1.ann1.L3S1G4 Arachis hypogaea HOM05D007678 ORTHO05D009658 1.3e-52 210.7 212 57.5
Zm00001eb303400 Zea mays HOM05D007678 ORTHO05D009658 1.8e-52 210.3 203 53.2
Phvul.008G043200 Phaseolus vulgaris HOM05D007678 ORTHO05D009658 4.5e-48 195.7 163 68.1
TPR.G4277 Trifolium pratense HOM05D007678 ORTHO05D009658 2.2e-47 193.4 138 76.8
Rhsim01G0121700 Rhododendron simsii HOM05D007678 ORTHO05D009658 1.2e-45 187.6 147 64.6
CBR_g30334 Chara braunii HOM05D007678 ORTHO05D009658 1.6e-45 187.2 210 44.8
Pp3c18_7980 Physcomitrium patens HOM05D007678 ORTHO05D009658 1.3e-44 184.1 206 42.7
Mapoly0003s0067 Marchantia polymorpha HOM05D007678 ORTHO05D009658 2.3e-44 183.3 207 43.0
SMO174G0167 Selaginella moellendorffii HOM05D007678 ORTHO05D009658 2.2e-39 166.8 183 43.7
Cc06_g20600 Coffea canephora HOM05D007678 ORTHO05D009658 2.9e-39 166.4 177 53.1
QL04p021970 Quercus lobata HOM05D007678 ORTHO05D009658 2.7e-37 159.8 108 75.0
CANSAT56G0191 Cannabis sativa HOM05D007678 ORTHO05D009658 2.0e-35 153.7 128 61.7
TPR.G8973 Trifolium pratense HOM05D007678 ORTHO05D009658 5.7e-35 152.1 99 75.8
arahy.Tifrunner.gnm1.ann1.1DGF2A Arachis hypogaea HOM05D007678 ORTHO05D009658 1.8e-33 147.1 94 74.5
Cpa.g.sc33.162 Carica papaya HOM05D007678 ORTHO05D009658 2.0e-32 143.7 106 70.8
Lsat_1_v5_gn_5_155661 Lactuca sativa HOM05D007678 ORTHO05D009658 1.0e-31 141.4 207 43.5
arahy.Tifrunner.gnm1.ann1.6E2HM0 Arachis hypogaea HOM05D007678 ORTHO05D009658 3.1e-25 119.8 78 74.4
PRCOL_00006709 Prasinoderma coloniale HOM05D007678 ORTHO05D009658 2.0e-24 117.1 197 32.5
Cc06_g20610 Coffea canephora HOM05D007678 ORTHO05D009658 2.9e-23 113.2 85 67.1
MCO01G505 Micromonas commoda HOM05D007678 ORTHO05D009658 1.9e-22 110.5 196 31.1
GSVIVG01012452001 Vitis vinifera HOM05D007678 ORTHO05D009658 9.7e-19 98.2 80 62.5
arahy.Tifrunner.gnm1.ann1.78M82M Arachis hypogaea HOM05D007678 ORTHO05D009658 3.1e-17 93.2 64 71.9
CSS0047660 Camellia sinensis var. sinensis HOM05D007678 ORTHO05D009658 8.5e-15 85.1 60 66.7
arahy.Tifrunner.gnm1.ann1.NH3ZAS Arachis hypogaea HOM05D007678 ORTHO05D009658 3.2e-14 83.2 66 71.2
QL04p021975 Quercus lobata HOM05D007678 ORTHO05D009658 1.4e-12 77.8 58 67.2
arahy.Tifrunner.gnm1.ann1.BX3238 Arachis hypogaea HOM05D007678 ORTHO05D009658 3.0e-12 76.6 72 62.5
arahy.Tifrunner.gnm1.ann1.Q44M57 Arachis hypogaea HOM05D006052 ORTHO05D007319 2.6e-11 73.6 46 76.1
FAN03G1326 Fragaria x ananassa HOM05D001392 ORTHO05D006407 7.5e-11 72.0 90 56.7
Os07g0222900 Oryza sativa ssp. japonica HOM05D007678 ORTHO05D009658 2.8e-10 70.1 69 52.2
arahy.Tifrunner.gnm1.ann1.MMNX5U Arachis hypogaea HOM05D000747 ORTHO05D009658 5.9e-08 62.4 50 68.0
QL02p047964 Quercus lobata HOM05D007678 ORTHO05D009658 1.0e-07 61.6 51 64.7
TPR.G4281 Trifolium pratense HOM05D007678 ORTHO05D009658 6.5e-07 58.9 40 75.0


User provided reference genes

Program Settings