Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr17g0337141 Lupinus albus HOM05D006473 ORTHO05D008108 3.5e-130 468.4 251 100.0
Lj6g0005292 Lotus japonicus HOM05D006473 ORTHO05D008108 6.7e-57 224.9 169 68.0
arahy.Tifrunner.gnm1.ann1.ITU10B Arachis hypogaea HOM05D006473 ORTHO05D008108 1.2e-53 214.2 211 61.6
TPR.G17559 Trifolium pratense HOM05D006473 ORTHO05D008108 4.5e-53 212.2 171 65.5
Psat5g106240 Pisum sativum HOM05D006473 ORTHO05D008108 2.9e-52 209.5 167 66.5
Glyma.13G004200 Glycine max HOM05D006473 ORTHO05D008108 3.6e-50 202.6 236 53.4
Medtr3g082070 Medicago truncatula HOM05D006473 ORTHO05D008108 1.4e-49 200.7 166 63.9
arahy.Tifrunner.gnm1.ann1.UN21ID Arachis hypogaea HOM05D006473 ORTHO05D008108 2.3e-49 199.9 169 62.7
Phvul.007G120134 Phaseolus vulgaris HOM05D006473 ORTHO05D008108 3.1e-46 189.5 163 62.0
Glyma.20G063000 Glycine max HOM05D006473 ORTHO05D008108 2.2e-44 183.3 166 58.4
VMungo0540G0033 Vigna mungo HOM05D006473 ORTHO05D008108 1.6e-42 177.2 160 60.6
Ca_16320_v3 Cicer arietinum L. HOM05D006473 ORTHO05D008108 2.0e-37 160.2 148 59.5
Duzib138G0874 Durio zibethinus HOM05D006473 ORTHO05D008108 5.2e-33 145.6 166 51.8
CiPaw.03G109100 Carya illinoinensis HOM05D006473 ORTHO05D008108 2.0e-32 143.7 167 44.9
Cfa023365 Carpinus fangiana HOM05D006473 ORTHO05D008108 2.6e-32 143.3 156 50.0
Haze_13544 Corylus avellana HOM05D006473 ORTHO05D008108 7.5e-32 141.7 156 50.0
COL.COLO4_19989 Corchorus olitorius HOM05D006473 ORTHO05D008108 1.3e-31 141.0 169 49.1
Prupe.3G184300 Prunus persica HOM05D006473 ORTHO05D008108 2.2e-31 140.2 161 52.8
Thecc.01G174700 Theobroma cacao HOM05D006473 ORTHO05D008108 2.2e-31 140.2 165 47.9
ClCG11G016910 Citrullus lanatus HOM05D006473 ORTHO05D008108 2.8e-31 139.8 148 52.7
Sabra06G0006200 Salix brachista HOM05D006473 ORTHO05D008108 3.7e-31 139.4 169 47.3
Sed0027280 Sechium edule HOM05D006473 ORTHO05D008108 4.8e-31 139.0 144 52.1
RcHm_v2.0_Chr2g0153221 Rosa chinensis HOM05D006473 ORTHO05D008108 2.4e-30 136.7 171 48.5
MD09G1143500 Malus domestica HOM05D006473 ORTHO05D008108 4.1e-30 136.0 156 50.6
CsaV3_4G032520 Cucumis sativus L. HOM05D006473 ORTHO05D008108 7.0e-30 135.2 157 51.0
FAN05G1961 Fragaria x ananassa HOM05D006473 ORTHO05D008108 9.1e-30 134.8 173 48.0
COL.COLO4_18222 Corchorus olitorius HOM05D006473 ORTHO05D008108 1.6e-29 134.0 171 48.0
Gohir.A11G155300 Gossypium hirsutum HOM05D006473 ORTHO05D008108 1.6e-29 134.0 172 45.3
Gorai.007G172600 Gossypium raimondii HOM05D006473 ORTHO05D008108 1.6e-29 134.0 172 45.9
Gohir.D11G162300 Gossypium hirsutum HOM05D006473 ORTHO05D008108 2.0e-29 133.7 172 45.3
MELO3C026363.2 Cucumis melo HOM05D006473 ORTHO05D008108 2.7e-29 133.3 159 48.4
CANSAT64G1482 Cannabis sativa HOM05D006473 ORTHO05D008108 3.5e-29 132.9 172 45.9
MD17G1129800 Malus domestica HOM05D006473 ORTHO05D008108 5.9e-29 132.1 165 48.5
Atru.chr8.1011 Acer truncatum HOM05D006473 ORTHO05D008108 1.0e-28 131.3 147 47.6
Potri.006G008000 Populus trichocarpa HOM05D006473 ORTHO05D008108 1.5e-27 127.5 164 45.7
FvH4_6g39300 Fragaria vesca HOM05D006473 ORTHO05D008108 3.2e-27 126.3 154 47.4
Ciclev10012907m.g Citrus clementina HOM05D006473 ORTHO05D008108 5.5e-27 125.6 146 52.1
Manes.08G068100 Manihot esculenta HOM05D006473 ORTHO05D008108 9.4e-27 124.8 161 42.9
CiPaw.04G072200 Carya illinoinensis HOM05D006473 ORTHO05D008108 2.7e-26 123.2 167 43.1
FAN09G0937 Fragaria x ananassa HOM05D006473 ORTHO05D008108 6.1e-26 122.1 163 46.0
FAN14G2613 Fragaria x ananassa HOM05D006473 ORTHO05D008108 6.1e-26 122.1 163 46.0
TWI34G1686 Tripterygium wilfordii HOM05D006473 ORTHO05D008108 8.0e-26 121.7 152 48.0
Sed0014549 Sechium edule HOM05D006473 ORTHO05D008108 3.0e-25 119.8 151 49.0
QL07p025679 Quercus lobata HOM05D006473 ORTHO05D008108 1.2e-24 117.9 179 41.3
Haze_13545 Corylus avellana HOM05D006473 ORTHO05D008108 3.4e-24 116.3 135 46.7
PGR031G0759 Punica granatum HOM05D006473 ORTHO05D008108 2.8e-23 113.2 162 43.2
QL07p026949 Quercus lobata HOM05D006473 ORTHO05D008108 4.1e-22 109.4 179 39.7
Sabra16G0000300 Salix brachista HOM05D006473 ORTHO05D008108 9.2e-22 108.2 163 41.1
QL10p019398 Quercus lobata HOM05D006473 ORTHO05D008108 2.0e-21 107.1 176 38.6
Lsat_1_v5_gn_1_29560 Lactuca sativa HOM05D006473 ORTHO05D008108 2.7e-21 106.7 176 40.9
Eucgr.A00949 Eucalyptus grandis HOM05D006473 ORTHO05D008108 2.3e-20 103.6 151 43.7
Sp7g13370 Schrenkiella parvula HOM05D006473 ORTHO05D008108 3.8e-20 102.8 154 41.6
CAN.G529.20 Capsicum annuum HOM05D006473 ORTHO05D008108 5.0e-20 102.4 145 43.4
QL07p027003 Quercus lobata HOM05D006473 ORTHO05D008108 6.6e-20 102.1 167 40.7
BraA05t20604Z Brassica rapa HOM05D006473 ORTHO05D008108 8.6e-20 101.7 156 42.3
TAR626G1390 Trochodendron aralioides HOM05D006473 ORTHO05D008108 1.1e-19 101.3 146 44.5
EL10Ac6g15336 Beta vulgaris HOM05D006473 ORTHO05D008108 1.5e-19 100.9 140 41.4
Thhalv10027487m.g Eutrema salsugineum HOM05D006473 ORTHO05D008108 1.5e-19 100.9 156 42.3
BcaB02g07838 Brassica carinata HOM05D006473 ORTHO05D008108 1.9e-19 100.5 154 44.2
A05p16970 Brassica napus HOM05D006473 ORTHO05D008108 2.5e-19 100.1 154 41.6
Carub.0007s2685 Capsella rubella HOM05D006473 ORTHO05D008108 2.5e-19 100.1 157 42.0
THA.LOC104808506 Tarenaya hassleriana HOM05D006473 ORTHO05D008108 2.5e-19 100.1 153 43.1
AT4G15140 Arabidopsis thaliana HOM05D006473 ORTHO05D008108 3.3e-19 99.8 155 41.9
Nitab4.5_0002292g0030 Nicotiana tabacum HOM05D006473 ORTHO05D008108 3.3e-19 99.8 148 43.9
BcaC08g44251 Brassica carinata HOM05D006473 ORTHO05D008108 9.5e-19 98.2 155 40.6
C06p16570 Brassica napus HOM05D006473 ORTHO05D008108 9.5e-19 98.2 155 40.6
BolC6t36859H Brassica oleracea HOM05D006473 ORTHO05D008108 9.5e-19 98.2 155 40.6
PGSC0003DMG400013558 Solanum tuberosum HOM05D006473 ORTHO05D008108 9.5e-19 98.2 142 42.3
CARHR221880 Cardamine hirsuta HOM05D006473 ORTHO05D008108 1.2e-18 97.8 154 42.2
BcaC07g37876 Brassica carinata HOM05D006473 ORTHO05D008108 2.1e-18 97.1 157 40.8
BolC8t48269H Brassica oleracea HOM05D006473 ORTHO05D008108 2.1e-18 97.1 157 40.8
A08p11670 Brassica napus HOM05D006473 ORTHO05D008108 8.0e-18 95.1 160 41.9
BraA08t33161Z Brassica rapa HOM05D006473 ORTHO05D008108 8.0e-18 95.1 160 41.9
Peaxi162Scf00393g01011 Petunia axillaris HOM05D006473 ORTHO05D008108 1.0e-17 94.7 149 41.6
AL7G40560 Arabidopsis lyrata HOM05D006473 ORTHO05D008108 1.8e-17 94.0 155 41.3
TAR626G1015 Trochodendron aralioides HOM05D006473 ORTHO05D008108 1.8e-17 94.0 150 43.3
DCAR_029496 Daucus carota HOM05D006473 ORTHO05D008108 2.3e-17 93.6 177 36.2
ECA247G3587 Erigeron canadensis HOM05D006473 ORTHO05D008108 4.0e-17 92.8 171 40.4
Nn7g38339 Nelumbo nucifera HOM05D006473 ORTHO05D008108 4.0e-17 92.8 146 39.7
Nitab4.5_0011512g0010 Nicotiana tabacum HOM05D006473 ORTHO05D008108 4.0e-17 92.8 152 40.8
CSS0026100 Camellia sinensis var. sinensis HOM05D006473 ORTHO05D008108 5.2e-17 92.4 173 40.5
CSS0046570 Camellia sinensis var. sinensis HOM05D006473 ORTHO05D008108 5.2e-17 92.4 173 40.5
Peaxi162Scf00322g00416 Petunia axillaris HOM05D006473 ORTHO05D008108 5.2e-17 92.4 151 41.7
Solyc07g043070.3 Solanum lycopersicum HOM05D006473 ORTHO05D008108 1.5e-16 90.9 149 39.6
Sopen07g022630 Solanum pennellii HOM05D006473 ORTHO05D008108 1.5e-16 90.9 149 39.6
Cpa.g.sc8.265 Carica papaya HOM05D006473 ORTHO05D008108 2.6e-16 90.1 161 40.4
Aqoxy5G02466 Aquilegia oxysepala HOM05D006473 ORTHO05D008108 4.4e-16 89.4 148 39.9
QL09p045725 Quercus lobata HOM05D006473 ORTHO05D008108 5.7e-16 89.0 102 47.1
BcaB04g18284 Brassica carinata HOM05D006473 ORTHO05D008108 7.5e-16 88.6 154 42.2
QL04p064817 Quercus lobata HOM05D006473 ORTHO05D008108 2.2e-15 87.0 154 39.0
QL07p026979 Quercus lobata HOM05D006473 ORTHO05D008108 2.2e-15 87.0 103 48.5
SGA_v2.0_scaffold49G18372 Striga asiatica HOM05D006473 ORTHO05D008108 2.2e-15 87.0 138 40.6
Cc00_g04870 Coffea canephora HOM05D006473 ORTHO05D008108 3.7e-15 86.3 143 42.0
Aa31LG9G2250 Aethionema arabicum HOM05D006473 ORTHO05D008108 6.4e-15 85.5 156 38.5
HanXRQChr02g0035171 Helianthus annuus HOM05D006473 ORTHO05D008108 6.4e-15 85.5 163 39.3
Migut.H01260 Erythranthe guttata HOM05D006473 ORTHO05D008108 8.3e-15 85.1 153 38.6
Hund04387 Selenicereus undatus HOM05D006473 ORTHO05D008108 1.1e-14 84.7 149 36.9
Hund23023 Selenicereus undatus HOM05D006473 ORTHO05D008108 2.4e-14 83.6 156 36.5
CDE05G3197 Ceratophyllum demersum HOM05D006473 ORTHO05D008108 4.1e-14 82.8 138 39.9
Sc07g0001930 Simmondsia chinensis HOM05D006473 ORTHO05D008108 7.0e-14 82.0 146 36.3
PSO675G8005 Papaver somniferum HOM05D006473 ORTHO05D008108 7.8e-13 78.6 173 32.9
Actinidia12507 Actinidia chinensis HOM05D006473 ORTHO05D008108 1.3e-12 77.8 174 36.8
Nitab4.5_0000170g0320 Nicotiana tabacum HOM05D006473 ORTHO05D008108 1.3e-12 77.8 111 42.3
GSVIVG01015888001 Vitis vinifera HOM05D006473 ORTHO05D008108 1.7e-12 77.4 146 40.4
QL04p064939 Quercus lobata HOM05D006473 ORTHO05D008108 8.6e-12 75.1 156 37.2
MBI02_g01129_MAGBIO Magnolia biondii HOM05D006464 ORTHO05D007923 1.5e-11 74.3 83 48.2
vmacro08765 Vaccinium macrocarpon HOM05D006473 ORTHO05D008108 5.6e-11 72.4 156 35.9
CDE11G0296 Ceratophyllum demersum HOM05D006473 ORTHO05D008108 7.3e-11 72.0 79 51.9
Actinidia32074 Actinidia chinensis HOM05D006473 ORTHO05D008108 1.2e-10 71.2 167 33.5
Rhsim12G0015400 Rhododendron simsii HOM05D006473 ORTHO05D008108 2.1e-10 70.5 137 36.5
ATR0763G071 Amborella trichopoda HOM05D006473 ORTHO05D008108 1.0e-09 68.2 155 32.9
Oeu027256.1 Olea europaea HOM05D006473 ORTHO05D008108 1.4e-09 67.8 99 43.4
HPP92_016064 Vanilla planifolia HOM05D006473 ORTHO05D008108 6.8e-09 65.5 39 74.4
Os04g0504200 Oryza sativa ssp. japonica HOM05D006473 ORTHO05D008108 5.8e-08 62.4 53 60.4
Zm00001eb078060 Zea mays HOM05D006473 ORTHO05D008108 5.8e-08 62.4 48 66.7
AUR62017858 Chenopodium quinoa HOM05D006473 ORTHO05D008108 2.2e-07 60.5 98 38.8
QL05p058452 Quercus lobata HOM05D000045 ORTHO05D000611 3.7e-07 59.7 119 34.5
unitig_62.g23243 Utricularia gibba HOM05D006473 ORTHO05D008108 1.4e-06 57.8 35 71.4
Cpa.g.sc32.52 Carica papaya HOM05D006473 ORTHO05D008108 4.1e-06 56.2 145 34.5
Oeu036758.1 Olea europaea HOM05D006473 ORTHO05D008108 9.2e-06 55.1 49 57.1


User provided reference genes

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