Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr17g0337001 Lupinus albus HOM05D006007 ORTHO05D007518 1.2e-309 1065.8 631 100.0
Glyma.18G266400 Glycine max HOM05D006007 ORTHO05D007518 4.4e-222 775.0 657 76.1
Ca_04352_v3 Cicer arietinum L. HOM05D006007 ORTHO05D007518 3.4e-206 722.2 684 70.8
Phvul.008G033600 Phaseolus vulgaris HOM05D006007 ORTHO05D007518 2.1e-200 703.0 616 72.2
Lj1g0023913 Lotus japonicus HOM05D006007 ORTHO05D007518 1.8e-199 699.9 666 69.7
Medtr7g013700 Medicago truncatula HOM05D006007 ORTHO05D007518 1.3e-189 667.2 660 69.7
Glyma.08G245100 Glycine max HOM05D006007 ORTHO05D007518 4.1e-188 662.1 558 74.0
arahy.Tifrunner.gnm1.ann1.J3LTHX Arachis hypogaea HOM05D006007 ORTHO05D007518 3.5e-187 659.1 750 64.0
Ca_30479_v3 Cicer arietinum L. HOM05D006007 ORTHO05D007518 7.8e-187 657.9 531 77.2
arahy.Tifrunner.gnm1.ann1.EQE0CJ Arachis hypogaea HOM05D006007 ORTHO05D007518 3.0e-186 656.0 750 63.7
RcHm_v2.0_Chr2g0165881 Rosa chinensis HOM05D006007 ORTHO05D007518 1.8e-159 567.0 659 58.0
Cfa007665 Carpinus fangiana HOM05D006007 ORTHO05D007518 9.0e-159 564.7 668 55.1
QL02p067640 Quercus lobata HOM05D006007 ORTHO05D007518 1.2e-158 564.3 682 56.7
Gohir.A11G072800 Gossypium hirsutum HOM05D006007 ORTHO05D007518 3.5e-155 552.7 685 54.2
CiPaw.03G088800 Carya illinoinensis HOM05D006007 ORTHO05D007518 6.0e-155 552.0 660 57.9
GSVIVG01032902001 Vitis vinifera HOM05D006007 ORTHO05D007518 1.1e-153 547.7 672 54.3
Gorai.007G082800 Gossypium raimondii HOM05D006007 ORTHO05D007518 1.9e-153 547.0 682 53.4
Potri.017G093600 Populus trichocarpa HOM05D006007 ORTHO05D007518 5.3e-151 538.9 665 53.7
FvH4_6g46910 Fragaria vesca HOM05D006007 ORTHO05D007518 1.3e-149 534.3 658 55.9
FAN09G0451 Fragaria x ananassa HOM05D006007 ORTHO05D007518 1.3e-149 534.3 661 54.3
Duzib264G0491 Durio zibethinus HOM05D006007 ORTHO05D007518 1.7e-149 533.9 664 53.6
Gohir.D11G077100 Gossypium hirsutum HOM05D006007 ORTHO05D007518 2.2e-149 533.5 682 52.6
FAN05G3222 Fragaria x ananassa HOM05D006007 ORTHO05D007518 3.2e-148 529.6 675 53.3
Manes.02G054700 Manihot esculenta HOM05D006007 ORTHO05D007518 1.6e-147 527.3 691 52.5
Haze_14433 Corylus avellana HOM05D006007 ORTHO05D007518 4.6e-147 525.8 727 49.7
Sabra17G0082500 Salix brachista HOM05D006007 ORTHO05D007518 1.3e-146 524.2 662 52.6
TAR264G0002 Trochodendron aralioides HOM05D006007 ORTHO05D007518 1.3e-146 524.2 673 53.2
Atru.chr8.458 Acer truncatum HOM05D006007 ORTHO05D007518 3.0e-146 523.1 659 54.0
Thecc.04G095300 Theobroma cacao HOM05D006007 ORTHO05D007518 8.7e-146 521.5 660 53.0
FAN02G0083 Fragaria x ananassa HOM05D006007 ORTHO05D007518 1.1e-145 521.2 675 54.2
CANSAT64G1701 Cannabis sativa HOM05D006007 ORTHO05D007518 2.1e-144 516.9 674 56.1
FAN14G4567 Fragaria x ananassa HOM05D006007 ORTHO05D007518 5.5e-140 502.3 691 52.4
Dinv34943 Davidia involucrata HOM05D006007 ORTHO05D007518 2.7e-139 500.0 542 57.0
TWI32G0586 Tripterygium wilfordii HOM05D006007 ORTHO05D007518 1.0e-138 498.0 651 53.3
Prupe.3G255200 Prunus persica HOM05D006007 ORTHO05D007518 3.0e-138 496.5 533 59.8
CSS0026219 Camellia sinensis var. sinensis HOM05D006007 ORTHO05D007518 1.1e-137 494.6 663 50.8
CSS0007202 Camellia sinensis var. sinensis HOM05D006007 ORTHO05D007518 1.5e-137 494.2 660 51.1
Nn4g23426 Nelumbo nucifera HOM05D006007 ORTHO05D007518 1.5e-137 494.2 673 52.0
Ciclev10011374m.g Citrus clementina HOM05D006007 ORTHO05D007518 1.9e-137 493.8 623 53.8
CiPaw.04G055900 Carya illinoinensis HOM05D006007 ORTHO05D007518 1.5e-134 484.2 511 57.1
MELO3C022635.2 Cucumis melo HOM05D006007 ORTHO05D007518 3.8e-133 479.6 658 54.9
FAN05G2596 Fragaria x ananassa HOM05D006007 ORTHO05D007518 1.4e-132 477.6 532 58.3
Nitab4.5_0000212g0230 Nicotiana tabacum HOM05D006007 ORTHO05D007518 4.6e-131 472.6 656 50.8
Cc07_g04190 Coffea canephora HOM05D006007 ORTHO05D007518 1.0e-130 471.5 658 48.3
Psat3g201920 Pisum sativum HOM05D006007 ORTHO05D007518 1.3e-128 464.5 430 70.5
Sed0005820 Sechium edule HOM05D006007 ORTHO05D007518 6.3e-128 462.2 651 53.0
Solyc02g066940.4 Solanum lycopersicum HOM05D006007 ORTHO05D007518 1.3e-125 454.5 656 49.7
PGSC0003DMG400025145 Solanum tuberosum HOM05D006007 ORTHO05D007518 1.7e-125 454.1 661 49.5
COL.COLO4_07027 Corchorus olitorius HOM05D006007 ORTHO05D007518 3.2e-124 449.9 542 53.5
ClCG07G016350 Citrullus lanatus HOM05D006007 ORTHO05D007518 4.2e-124 449.5 774 49.4
PSO017G6380 Papaver somniferum HOM05D006007 ORTHO05D007518 5.5e-124 449.1 655 49.2
Thhalv10003901m.g Eutrema salsugineum HOM05D006007 ORTHO05D007518 1.2e-123 448.0 607 49.8
CDE02G4269 Ceratophyllum demersum HOM05D006007 ORTHO05D007518 6.1e-123 445.7 659 46.4
PSO478G1877 Papaver somniferum HOM05D006007 ORTHO05D007518 3.0e-122 443.4 653 48.9
CAN.G398.20 Capsicum annuum HOM05D006007 ORTHO05D007518 1.3e-120 438.0 656 48.9
Carub.0005s0814 Capsella rubella HOM05D006007 ORTHO05D007518 6.3e-120 435.6 643 49.6
THA.LOC104823889 Tarenaya hassleriana HOM05D006007 ORTHO05D007518 4.1e-119 433.0 685 47.0
Sp2g17990 Schrenkiella parvula HOM05D006007 ORTHO05D007518 1.2e-118 431.4 615 49.1
Hund15552 Selenicereus undatus HOM05D006007 ORTHO05D007518 1.5e-118 431.0 551 51.2
PGR004G1158 Punica granatum HOM05D006007 ORTHO05D007518 3.5e-118 429.9 626 46.2
Aa31LG2G3900 Aethionema arabicum HOM05D006007 ORTHO05D007518 4.5e-118 429.5 637 48.2
BraA02t08659Z Brassica rapa HOM05D006007 ORTHO05D007518 2.2e-117 427.2 610 49.5
ECA246G0757 Erigeron canadensis HOM05D006007 ORTHO05D007518 2.9e-117 426.8 643 47.7
MSTRG.23885 Avicennia marina HOM05D006007 ORTHO05D007518 3.8e-117 426.4 627 47.4
Sopen02g016130 Solanum pennellii HOM05D006007 ORTHO05D007518 6.5e-117 425.6 530 51.5
A02p36640 Brassica napus HOM05D006007 ORTHO05D007518 8.5e-117 425.2 610 49.0
EL10Ac2g03139 Beta vulgaris HOM05D006007 ORTHO05D007518 1.1e-116 424.9 662 47.1
CsaV3_4G009190 Cucumis sativus L. HOM05D006007 ORTHO05D007518 1.5e-116 424.5 532 58.3
HanXRQChr17g0546081 Helianthus annuus HOM05D006007 ORTHO05D007518 4.2e-116 422.9 662 48.2
vmacro05632 Vaccinium macrocarpon HOM05D006007 ORTHO05D007518 9.4e-116 421.8 654 46.5
ATR0177G014 Amborella trichopoda HOM05D006007 ORTHO05D007518 1.2e-115 421.4 698 42.8
BcaC03g17580 Brassica carinata HOM05D006007 ORTHO05D007518 3.6e-115 419.9 628 47.5
BcaB07g30079 Brassica carinata HOM05D006007 ORTHO05D007518 6.1e-115 419.1 612 49.3
C02p55600 Brassica napus HOM05D006007 ORTHO05D007518 6.1e-115 419.1 628 47.6
BolC2t11616H Brassica oleracea HOM05D006007 ORTHO05D007518 6.1e-115 419.1 628 47.6
AL5G19590 Arabidopsis lyrata HOM05D006007 ORTHO05D007518 1.4e-114 417.9 645 47.1
Peaxi162Scf00991g00329 Petunia axillaris HOM05D006007 ORTHO05D007518 5.2e-114 416.0 516 51.0
DCAR_005549 Daucus carota HOM05D006007 ORTHO05D007518 1.5e-113 414.5 637 47.9
Aqoxy3G03693 Aquilegia oxysepala HOM05D006007 ORTHO05D007518 2.0e-113 414.1 654 46.9
AT3G29390 Arabidopsis thaliana HOM05D006007 ORTHO05D007518 1.3e-112 411.4 526 50.8
Ah.10g032260 Amaranthus hybridus HOM05D006007 ORTHO05D007518 3.7e-112 409.8 573 48.7
HPP92_007829 Vanilla planifolia HOM05D006007 ORTHO05D007518 6.3e-112 409.1 685 43.1
Oeu004412.3 Olea europaea HOM05D006007 ORTHO05D007518 3.1e-111 406.8 745 43.9
Migut.H00628 Erythranthe guttata HOM05D006007 ORTHO05D007518 9.1e-111 405.2 534 51.5
Rhsim10G0048800 Rhododendron simsii HOM05D006007 ORTHO05D007518 2.6e-110 403.7 645 43.9
Lj4A118G52 Lonicera japonica HOM05D006007 ORTHO05D007518 1.7e-109 401.0 645 43.9
Cpa.g.sc14.172 Carica papaya HOM05D006007 ORTHO05D007518 8.0e-107 392.1 440 53.9
AUR62018183 Chenopodium quinoa HOM05D006007 ORTHO05D007518 1.4e-106 391.3 604 46.4
SalBow1G7079 Salvia bowleyana HOM05D006007 ORTHO05D007518 1.4e-106 391.3 521 49.9
TPR.G33475 Trifolium pratense HOM05D006007 ORTHO05D007518 1.3e-101 374.8 237 81.4
unitig_52.g17640 Utricularia gibba HOM05D006007 ORTHO05D007518 1.3e-101 374.8 628 44.9
Lsat_1_v5_gn_3_97780 Lactuca sativa HOM05D006007 ORTHO05D007518 2.9e-101 373.6 667 42.9
Nitab4.5_0010627g0030 Nicotiana tabacum HOM05D006007 ORTHO05D007518 1.5e-97 361.3 649 45.3
Zm00001eb008620 Zea mays HOM05D006007 ORTHO05D007518 3.4e-97 360.1 717 37.9
SEGI_40404 Sequoiadendron giganteum HOM05D006007 ORTHO05D007518 3.4e-89 333.6 619 40.2
AUR62038668 Chenopodium quinoa HOM05D006007 ORTHO05D007518 2.2e-88 330.9 396 51.8
Mapoly0218s0012 Marchantia polymorpha HOM05D006007 ORTHO05D007518 3.7e-80 303.5 620 37.1
HPP92_007749 Vanilla planifolia HOM05D006007 ORTHO05D007518 2.3e-77 294.3 294 56.8
Eucgr.J01380 Eucalyptus grandis HOM05D006007 ORTHO05D007518 3.9e-77 293.5 471 46.5
MD09G1066300 Malus domestica HOM05D006007 ORTHO05D007518 9.5e-76 288.9 247 64.4
MBI19_g00631_MAGBIO Magnolia biondii HOM05D006007 ORTHO05D007518 1.2e-75 288.5 270 60.0
Hma1.2p1_0481F.1_g162140 Hydrangea macrophylla HOM05D006007 ORTHO05D007518 8.0e-75 285.8 432 47.2
Hma1.2p1_0481F.1_g162150 Hydrangea macrophylla HOM05D006007 ORTHO05D007518 8.0e-75 285.8 432 47.2
Pp3c3_22820 Physcomitrium patens HOM05D006007 ORTHO05D007518 3.0e-69 267.3 308 50.6
Sc10g0004660 Simmondsia chinensis HOM05D006007 ORTHO05D007518 3.3e-68 263.8 251 63.3
MD09G1066400 Malus domestica HOM05D006007 ORTHO05D007518 8.1e-67 259.2 406 54.2
CBR_g19543 Chara braunii HOM05D006007 ORTHO05D007518 9.6e-52 209.1 353 39.4
Sc10g0004670 Simmondsia chinensis HOM05D006007 ORTHO05D007518 8.1e-51 206.1 414 38.4
CDE05G1269 Ceratophyllum demersum HOM05D006007 ORTHO05D007518 7.6e-49 199.5 234 50.0
MBI19_g00630_MAGBIO Magnolia biondii HOM05D006007 ORTHO05D007518 3.5e-46 190.7 408 39.5
Hma1.2p1_0481F.1_g162130 Hydrangea macrophylla HOM05D006007 ORTHO05D007518 9.6e-44 182.6 179 59.8
SHI25685 Sapria himalayana HOM05D006007 ORTHO05D007518 1.4e-39 168.7 139 62.6
SEGI_00365 Sequoiadendron giganteum HOM05D006007 ORTHO05D007518 5.4e-39 166.8 129 67.4
Os03g0213900 Oryza sativa ssp. japonica HOM05D006007 ORTHO05D007518 1.8e-37 161.8 149 61.1
BraA09t36042Z Brassica rapa HOM05D006007 ORTHO05D007518 5.6e-36 156.8 99 79.8
A09p04060 Brassica napus HOM05D006007 ORTHO05D010543 2.4e-34 151.4 99 77.8
SHI25684 Sapria himalayana HOM05D006007 ORTHO05D007518 2.5e-28 131.3 173 47.4
Oeu051018.1 Olea europaea HOM05D006007 ORTHO05D007518 2.4e-26 124.8 283 36.0
CDE05G3437 Ceratophyllum demersum HOM05D006007 ORTHO05D007518 1.2e-25 122.5 269 38.3
Cre09.g389900 Chlamydomonas reinhardtii HOM05D006007 ORTHO05D007518 1.1e-23 115.9 357 29.7
BolC2t11584H Brassica oleracea HOM05D006007 ORTHO05D007518 8.5e-16 89.7 70 65.7
MBI15_g14467_MAGBIO Magnolia biondii HOM05D003623 ORTHO05D007518 3.2e-15 87.8 140 42.1
BcaC03g17562 Brassica carinata HOM05D006007 ORTHO05D007518 2.1e-14 85.1 274 31.0
CARHR153030 Cardamine hirsuta HOM05D006007 ORTHO05D007518 3.3e-12 77.8 70 58.6
Cpa.g.sc14.174 Carica papaya HOM05D006007 ORTHO05D007518 2.2e-11 75.1 75 53.3
HPP92_007750 Vanilla planifolia HOM05D006007 ORTHO05D007518 1.4e-10 72.4 138 39.9


User provided reference genes

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