Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr17g0336321 Lupinus albus HOM05D002036 ORTHO05D001913 3.9e-290 1000.7 503 100.0
Lalb_Chr10g0091961 Lupinus albus HOM05D002036 ORTHO05D001913 1.2e-137 494.2 550 53.3
Glyma.02G095900 Glycine max HOM05D002036 ORTHO05D001913 1.2e-97 361.3 509 45.4
Glyma.18G285600 Glycine max HOM05D002036 ORTHO05D001913 2.8e-94 350.1 508 45.5
Phvul.008G016000 Phaseolus vulgaris HOM05D002036 ORTHO05D001913 2.1e-78 297.4 535 41.3
VMungo1383G1185 Vigna mungo HOM05D002036 ORTHO05D001913 2.3e-72 277.3 531 39.2
Lj1g0001009 Lotus japonicus HOM05D002036 ORTHO05D001913 1.1e-55 221.9 518 36.7
Ca_27919_v3 Cicer arietinum L. HOM05D002036 ORTHO05D001913 2.5e-47 194.1 492 35.8
Medtr7g022810 Medicago truncatula HOM05D002036 ORTHO05D001913 5.3e-45 186.4 501 34.1
arahy.Tifrunner.gnm1.ann1.EFG9YQ Arachis hypogaea HOM05D002036 ORTHO05D001913 5.9e-44 183.0 396 36.6
arahy.Tifrunner.gnm1.ann1.YI9QZC Arachis hypogaea HOM05D002036 ORTHO05D001913 5.9e-44 183.0 396 36.6
Psat3g186760 Pisum sativum HOM05D002036 ORTHO05D001913 2.2e-38 164.5 462 34.6
TPR.G15507 Trifolium pratense HOM05D002036 ORTHO05D001913 2.2e-38 164.5 467 34.0
CiPaw.01G281500 Carya illinoinensis HOM05D002036 ORTHO05D001913 2.2e-14 84.7 92 50.0
Cfa001544 Carpinus fangiana HOM05D002036 ORTHO05D001913 9.1e-13 79.3 92 47.8
QL08p057863 Quercus lobata HOM05D002036 ORTHO05D001913 9.1e-13 79.3 92 48.9
Haze_16989 Corylus avellana HOM05D002036 ORTHO05D001913 4.5e-12 77.0 92 46.7
Cpa.g.sc1.328 Carica papaya HOM05D002036 ORTHO05D001913 1.5e-10 72.0 94 42.6
TWI38G1436 Tripterygium wilfordii HOM05D002036 ORTHO05D001913 1.6e-09 68.6 84 41.7
Atru.chr12.567 Acer truncatum HOM05D002036 ORTHO05D001913 6.1e-09 66.6 88 45.5
Dinv25954 Davidia involucrata HOM05D002036 ORTHO05D001913 1.4e-08 65.5 83 43.4
Ciclev10030779m.g Citrus clementina HOM05D002036 ORTHO05D001913 5.2e-08 63.5 109 40.4
Thecc.10G058600 Theobroma cacao HOM05D002036 ORTHO05D001913 1.2e-07 62.4 84 44.0
TWI15G0462 Tripterygium wilfordii HOM05D002036 ORTHO05D001913 1.5e-07 62.0 86 39.5
Gohir.D05G299400 Gossypium hirsutum HOM05D002036 ORTHO05D001913 2.6e-07 61.2 68 52.9
Gorai.009G316900 Gossypium raimondii HOM05D002036 ORTHO05D001913 2.6e-07 61.2 68 52.9
Duzib114G0766 Durio zibethinus HOM05D002036 ORTHO05D001913 3.4e-07 60.8 256 28.9
Duzib106G0638 Durio zibethinus HOM05D002036 ORTHO05D001913 4.4e-07 60.5 273 28.2
Nn2g12861 Nelumbo nucifera HOM05D002036 ORTHO05D001913 5.7e-07 60.1 126 35.7
Potri.010G211700 Populus trichocarpa HOM05D002036 ORTHO05D001913 5.7e-07 60.1 87 36.8
CSS0021193 Camellia sinensis var. sinensis HOM05D002036 ORTHO05D001913 7.5e-07 59.7 84 41.7
Dinv31404 Davidia involucrata HOM05D002036 ORTHO05D001913 1.7e-06 58.5 93 40.9
Aqoxy4G03055 Aquilegia oxysepala HOM05D002036 ORTHO05D001913 2.2e-06 58.2 85 38.8
Hma1.2p1_0402F.1_g145150 Hydrangea macrophylla HOM05D002036 ORTHO05D001913 2.2e-06 58.2 84 41.7
Manes.07G109400 Manihot esculenta HOM05D002036 ORTHO05D001913 2.2e-06 58.2 84 39.3
CSS0027078 Camellia sinensis var. sinensis HOM05D002036 ORTHO05D001913 2.8e-06 57.8 67 49.3
Sabra08G0035300 Salix brachista HOM05D002036 ORTHO05D001913 2.8e-06 57.8 80 37.5
COL.COLO4_10915 Corchorus olitorius HOM05D002036 ORTHO05D001913 3.7e-06 57.4 275 25.5
Dinv37219 Davidia involucrata HOM05D002036 ORTHO05D001913 3.7e-06 57.4 123 35.0
Sabra10G0163700 Salix brachista HOM05D002036 ORTHO05D001913 3.7e-06 57.4 81 37.0
TAR680G0007 Trochodendron aralioides HOM05D002036 ORTHO05D001913 3.7e-06 57.4 91 38.5


User provided reference genes

Program Settings