Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr17g0335981 Lupinus albus HOM05D004062 ORTHO05D004417 8.7e-75 283.5 137 100.0
Glyma.18G293600 Glycine max HOM05D004062 ORTHO05D004417 6.5e-38 161.0 137 63.5
Glyma.02G089400 Glycine max HOM05D004062 ORTHO05D004417 6.1e-36 154.5 136 61.8
arahy.Tifrunner.gnm1.ann1.56V7KA Arachis hypogaea HOM05D004062 ORTHO05D004417 8.8e-35 150.6 143 60.1
arahy.Tifrunner.gnm1.ann1.RE711V Arachis hypogaea HOM05D004062 ORTHO05D004417 8.8e-35 150.6 143 60.1
Phvul.008G008800 Phaseolus vulgaris HOM05D004062 ORTHO05D004417 4.4e-34 148.3 142 57.0
Glyma.18G293500 Glycine max HOM05D004062 ORTHO05D004417 7.4e-34 147.5 143 56.6
VMungo1383G0607 Vigna mungo HOM05D004062 ORTHO05D004417 7.4e-34 147.5 137 56.9
Glyma.02G089500 Glycine max HOM05D004062 ORTHO05D004417 4.8e-33 144.8 145 58.6
VMungo1383G2158 Vigna mungo HOM05D004062 ORTHO05D004417 1.8e-32 142.9 142 54.9
Lj1g0013725 Lotus japonicus HOM05D004062 ORTHO05D004417 2.6e-31 139.0 137 54.7
Lalb_Chr04g0257671 Lupinus albus HOM05D004062 ORTHO05D004417 3.5e-31 138.7 139 54.0
Lj1g0027246 Lotus japonicus HOM05D004062 ORTHO05D004417 4.5e-31 138.3 140 55.7
Lj1g0017758 Lotus japonicus HOM05D004062 ORTHO05D004417 5.0e-30 134.8 149 55.7
Phvul.008G008700 Phaseolus vulgaris HOM05D004062 ORTHO05D004417 6.5e-30 134.4 137 54.7
Medtr7g082750 Medicago truncatula HOM05D004062 ORTHO05D004417 1.1e-29 133.7 138 53.6
Psat3g097280 Pisum sativum HOM05D004062 ORTHO05D004417 1.4e-29 133.3 139 52.5
Medtr7g082730 Medicago truncatula HOM05D004062 ORTHO05D004417 8.0e-28 127.5 128 57.8
arahy.Tifrunner.gnm1.ann1.95RUG0 Arachis hypogaea HOM05D004062 ORTHO05D004417 4.4e-26 121.7 137 52.6
arahy.Tifrunner.gnm1.ann1.EB5M6E Arachis hypogaea HOM05D004062 ORTHO05D004417 4.4e-26 121.7 137 52.6
Medtr7g082700 Medicago truncatula HOM05D004062 ORTHO05D004417 4.4e-26 121.7 130 56.2
Medtr7g082740 Medicago truncatula HOM05D004062 ORTHO05D004417 5.7e-26 121.3 130 56.2
Psat3g097360 Pisum sativum HOM05D004062 ORTHO05D004417 6.3e-25 117.9 129 54.3
Nn4g23971 Nelumbo nucifera HOM05D004062 ORTHO05D004417 7.0e-24 114.4 132 49.2
Ca_08097_v3 Cicer arietinum L. HOM05D004062 ORTHO05D004417 1.2e-23 113.6 137 50.4
Lj1g0018189 Lotus japonicus HOM05D004062 ORTHO05D004417 5.9e-23 111.3 142 47.9
Thecc.04G128000 Theobroma cacao HOM05D004062 ORTHO05D004417 5.9e-23 111.3 130 45.4
TPR.G16541 Trifolium pratense HOM05D004062 ORTHO05D004417 7.7e-23 110.9 141 49.6
Haze_14190 Corylus avellana HOM05D004062 ORTHO05D004417 1.0e-22 110.5 133 47.4
Dinv34790 Davidia involucrata HOM05D002710 ORTHO05D002905 1.0e-22 110.5 134 47.0
Duzib138G0221 Durio zibethinus HOM05D004062 ORTHO05D004417 2.2e-22 109.4 128 46.9
COL.COLO4_09380 Corchorus olitorius HOM05D004062 ORTHO05D004417 2.9e-22 109.0 135 43.7
TPR.G16550 Trifolium pratense HOM05D004062 ORTHO05D004417 8.5e-22 107.5 129 51.9
CiPaw.04G044300 Carya illinoinensis HOM05D004062 ORTHO05D004417 1.1e-21 107.1 130 45.4
Ca_08095_v3 Cicer arietinum L. HOM05D004062 ORTHO05D004417 1.1e-21 107.1 129 50.4
Ca_08096_v3 Cicer arietinum L. HOM05D004062 ORTHO05D004417 1.1e-21 107.1 129 49.6
TPR.G11392 Trifolium pratense HOM05D004062 ORTHO05D004417 1.9e-21 106.3 124 48.4
TAR622G0216 Trochodendron aralioides HOM05D004062 ORTHO05D004417 2.5e-21 105.9 133 44.4
Psat3g097240 Pisum sativum HOM05D004062 ORTHO05D004417 3.2e-21 105.5 136 50.0
Medtr7g082760 Medicago truncatula HOM05D004062 ORTHO05D004417 4.2e-21 105.1 141 51.1
Nn3g17968 Nelumbo nucifera HOM05D004062 ORTHO05D004417 7.2e-21 104.4 125 44.0
Gohir.A11G166400 Gossypium hirsutum HOM05D004062 ORTHO05D004417 2.1e-20 102.8 130 45.4
TPR.G16561 Trifolium pratense HOM05D004062 ORTHO05D004417 1.0e-19 100.5 130 49.2
Dinv33967 Davidia involucrata HOM05D004062 ORTHO05D004417 6.8e-19 97.8 122 45.9
PGR004G1762 Punica granatum HOM05D004062 ORTHO05D004417 2.0e-18 96.3 130 42.3
CiPaw.03G065300 Carya illinoinensis HOM05D004062 ORTHO05D004417 2.6e-18 95.9 132 42.4
Gohir.D11G172400 Gossypium hirsutum HOM05D004062 ORTHO05D004417 3.4e-18 95.5 130 45.4
Gohir.D11G172800 Gossypium hirsutum HOM05D004062 ORTHO05D004417 4.4e-18 95.1 130 45.4
Gorai.007G185100 Gossypium raimondii HOM05D004062 ORTHO05D004417 7.5e-18 94.4 130 44.6
TAR622G1405 Trochodendron aralioides HOM05D004062 ORTHO05D004417 7.5e-18 94.4 126 41.3
Aqoxy3G03995 Aquilegia oxysepala HOM05D004062 ORTHO05D004417 1.3e-17 93.6 131 43.5
Psat3g097320 Pisum sativum HOM05D004062 ORTHO05D004417 1.7e-17 93.2 127 48.0
QL02p050215 Quercus lobata HOM05D004062 ORTHO05D004417 2.8e-17 92.4 131 42.7
TAR629G2241 Trochodendron aralioides HOM05D004062 ORTHO05D004417 2.8e-17 92.4 121 45.5
Manes.01G113100 Manihot esculenta HOM05D004062 ORTHO05D004417 2.4e-16 89.4 126 43.7
CSS0038275 Camellia sinensis var. sinensis HOM05D004062 ORTHO05D004417 9.1e-16 87.4 130 40.0
Hma1.2p1_0500F.1_g167200 Hydrangea macrophylla HOM05D004062 ORTHO05D004417 1.2e-15 87.0 124 42.7
Manes.02G072000 Manihot esculenta HOM05D004062 ORTHO05D004417 1.2e-15 87.0 131 40.5
CSS0019285 Camellia sinensis var. sinensis HOM05D004062 ORTHO05D004417 2.7e-15 85.9 130 40.0
Aqoxy3G03996 Aquilegia oxysepala HOM05D004062 ORTHO05D004417 3.5e-15 85.5 137 40.9
Potri.017G119800 Populus trichocarpa HOM05D004062 ORTHO05D004417 3.5e-15 85.5 132 38.6
Cc07_g08490 Coffea canephora HOM05D004062 ORTHO05D004417 5.9e-15 84.7 129 41.1
Eucgr.F02795 Eucalyptus grandis HOM05D004062 ORTHO05D004417 5.9e-15 84.7 133 39.1
CiPaw.05G243300 Carya illinoinensis HOM05D004062 ORTHO05D004417 1.3e-14 83.6 136 39.0
MBI16_g14298_MAGBIO Magnolia biondii HOM05D004062 ORTHO05D004417 1.3e-14 83.6 128 38.3
Aqoxy3G03994 Aquilegia oxysepala HOM05D004062 ORTHO05D004417 2.2e-14 82.8 125 40.8
MBI16_g14297_MAGBIO Magnolia biondii HOM05D004062 ORTHO05D004417 2.9e-14 82.4 132 36.4
CANSAT78G1768 Cannabis sativa HOM05D004062 ORTHO05D004417 6.5e-14 81.3 136 40.4
Oeu041981.1 Olea europaea HOM05D004062 ORTHO05D004417 6.5e-14 81.3 128 39.1
Cpa.g.sc314.3 Carica papaya HOM05D004062 ORTHO05D004417 8.5e-14 80.9 120 40.0
MBI16_g14296_MAGBIO Magnolia biondii HOM05D004062 ORTHO05D004417 1.1e-13 80.5 119 38.7
Sabra17G0098800 Salix brachista HOM05D004062 ORTHO05D004417 1.1e-13 80.5 129 37.2
Atru.chr1.1607 Acer truncatum HOM05D004062 ORTHO05D004417 3.2e-13 79.0 135 36.3
Potri.010G119200 Populus trichocarpa HOM05D004062 ORTHO05D004417 3.2e-13 79.0 132 32.6
Migut.H00242 Erythranthe guttata HOM05D004062 ORTHO05D004417 4.2e-13 78.6 123 38.2
PGSC0003DMG400016976 Solanum tuberosum HOM05D004062 ORTHO05D004417 4.2e-13 78.6 107 43.0
PGSC0003DMG400030667 Solanum tuberosum HOM05D004062 ORTHO05D004417 4.2e-13 78.6 107 43.0
Potri.004G095150 Populus trichocarpa HOM05D004062 ORTHO05D004417 7.2e-13 77.8 135 36.3
Potri.004G095200 Populus trichocarpa HOM05D004062 ORTHO05D004417 7.2e-13 77.8 135 36.3
SalBow3G0055 Salvia bowleyana HOM05D004062 ORTHO05D004417 2.1e-12 76.3 99 42.4
Rhsim08G0083900 Rhododendron simsii HOM05D004062 ORTHO05D004417 2.7e-12 75.9 123 37.4
DCAR_010708 Daucus carota HOM05D004062 ORTHO05D004417 3.6e-12 75.5 135 36.3
Sabra04G0064400 Salix brachista HOM05D004062 ORTHO05D004417 6.1e-12 74.7 129 36.4
MSTRG.23597 Avicennia marina HOM05D004062 ORTHO05D004417 8.0e-12 74.3 125 39.2
Ciclev10013071m.g Citrus clementina HOM05D004062 ORTHO05D004417 8.0e-12 74.3 124 37.9
Oeu030797.1 Olea europaea HOM05D004062 ORTHO05D004417 8.0e-12 74.3 87 47.1
Oeu030798.1 Olea europaea HOM05D004062 ORTHO05D004417 8.0e-12 74.3 87 47.1
Rhsim10G0073300 Rhododendron simsii HOM05D004062 ORTHO05D004417 8.0e-12 74.3 134 35.1
MBI18_g04358_MAGBIO Magnolia biondii HOM05D004062 ORTHO05D004417 1.4e-11 73.6 128 34.4
Oeu012583.1 Olea europaea HOM05D004062 ORTHO05D004417 1.4e-11 73.6 127 36.2
Aqoxy3G03997 Aquilegia oxysepala HOM05D004062 ORTHO05D004417 2.3e-11 72.8 123 39.0
DCAR_010707 Daucus carota HOM05D004062 ORTHO05D004417 2.3e-11 72.8 103 38.8
Sabra10G0089600 Salix brachista HOM05D004062 ORTHO05D004417 3.0e-11 72.4 128 31.2
Thecc.02G220400 Theobroma cacao HOM05D004062 ORTHO05D004417 3.0e-11 72.4 121 35.5
Ciclev10018020m.g Citrus clementina HOM05D004062 ORTHO05D004417 4.0e-11 72.0 136 35.3
DCAR_010711 Daucus carota HOM05D004062 ORTHO05D004417 5.2e-11 71.6 126 34.9
DCAR_010713 Daucus carota HOM05D004062 ORTHO05D004417 5.2e-11 71.6 123 39.0
DCAR_010710 Daucus carota HOM05D004062 ORTHO05D004417 4.4e-10 68.6 128 33.6
Ciclev10017837m.g Citrus clementina HOM05D004062 ORTHO05D004417 5.7e-10 68.2 135 35.6
Ciclev10017934m.g Citrus clementina HOM05D004062 ORTHO05D004417 5.7e-10 68.2 127 35.4
DCAR_010706 Daucus carota HOM05D004062 ORTHO05D004417 9.8e-10 67.4 123 39.8
Lsat_1_v5_gn_3_82781 Lactuca sativa HOM05D004062 ORTHO05D004417 9.8e-10 67.4 87 37.9
EL10Ac2g04523 Beta vulgaris HOM05D004062 ORTHO05D004417 1.7e-09 66.6 119 38.7
Ciclev10018255m.g Citrus clementina HOM05D004062 ORTHO05D004417 2.2e-09 66.2 139 34.5
DCAR_010709 Daucus carota HOM05D004062 ORTHO05D004417 2.8e-09 65.9 136 34.6
SalBow5G1592 Salvia bowleyana HOM05D004062 ORTHO05D004417 2.8e-09 65.9 104 40.4
PGR102G0077 Punica granatum HOM05D004062 ORTHO05D004417 3.7e-09 65.5 140 33.6
SGA_v2.0_scaffold202G41473 Striga asiatica HOM05D004062 ORTHO05D004417 6.3e-09 64.7 89 44.9
Atru.chr11.263 Acer truncatum HOM05D004062 ORTHO05D004417 1.1e-08 63.9 140 32.9
Atru.chr11.283 Acer truncatum HOM05D004062 ORTHO05D004417 1.1e-08 63.9 140 32.9
RcHm_v2.0_Chr4g0434311 Rosa chinensis HOM05D004062 ORTHO05D004417 1.1e-08 63.9 138 34.1
CiPaw.05G243400 Carya illinoinensis HOM05D004062 ORTHO05D004417 1.8e-08 63.2 116 31.9
Oeu047438.1 Olea europaea HOM05D004062 ORTHO05D004417 1.8e-08 63.2 87 43.7
Migut.L00492 Erythranthe guttata HOM05D004062 ORTHO05D004417 7.0e-08 61.2 91 39.6
Actinidia15903 Actinidia chinensis HOM05D002710 ORTHO05D002905 9.1e-08 60.8 140 33.6
Manes.14G107900 Manihot esculenta HOM05D004062 ORTHO05D004417 1.2e-07 60.5 134 30.6
Haze_00662 Corylus avellana HOM05D004062 ORTHO05D004417 2.7e-07 59.3 130 33.1
Prupe.1G317700 Prunus persica HOM05D004062 ORTHO05D004417 2.7e-07 59.3 136 32.4
Dinv31584 Davidia involucrata HOM05D004062 ORTHO05D004417 5.9e-07 58.2 97 33.0
MBI10_g08537_MAGBIO Magnolia biondii HOM05D004062 ORTHO05D004417 7.7e-07 57.8 127 35.4
Ah.16g101490 Amaranthus hybridus HOM05D004062 ORTHO05D004417 1.0e-06 57.4 111 36.0
HanXRQChr04g0114591 Helianthus annuus HOM05D003529 ORTHO05D004106 1.0e-06 57.4 116 31.0
Prupe.1G317600 Prunus persica HOM05D004062 ORTHO05D004417 1.3e-06 57.0 133 32.3
Rhsim09G0103200 Rhododendron simsii HOM05D004062 ORTHO05D004417 1.3e-06 57.0 127 31.5
Ciclev10017483m.g Citrus clementina HOM05D004062 ORTHO05D004417 2.9e-06 55.8 102 33.3
Ciclev10013668m.g Citrus clementina HOM05D004062 ORTHO05D004417 3.8e-06 55.5 129 33.3
Migut.D00112 Erythranthe guttata HOM05D003529 ORTHO05D004106 3.8e-06 55.5 124 30.6
Cfa015828 Carpinus fangiana HOM05D004062 ORTHO05D004417 5.0e-06 55.1 109 33.0
Aqoxy3G00188 Aquilegia oxysepala HOM05D004062 ORTHO05D004417 8.6e-06 54.3 132 29.5
Medtr3g100640 Medicago truncatula HOM05D004062 ORTHO05D004417 8.6e-06 54.3 73 43.8
TWI31G0152 Tripterygium wilfordii HOM05D004062 ORTHO05D004417 8.6e-06 54.3 131 32.8


User provided reference genes

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